RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, human

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-222	ENST00000560131	ERH	P84090	104 aa	Known RBP	4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	KRTAP15-1	Q3LI76	137 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131		Q86TA4	180 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	LYPD1	Q8N2G4	141 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	SLC25A45	Q8N413	288 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	TMEM75	Q8N9X5	138 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	OR10X1	Q8NGY0	326 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	UBALD1	Q8TB05	177 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	IFI27L1	Q96BM0	104 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	ZNF479	Q96JC4	524 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	PGLYRP4	Q96LB8	373 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	LINC00479	Q96M42	142 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	TRGV9	Q99603	122 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	CHAC1	Q9BUX1	264 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	C1QTNF4	Q9BXJ3	329 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	TANC2	Q9HCD6	1990 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	NDUFA4L2	Q9NRX3	87 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	GNG12	Q9UBI6	72 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	UNC13C	Q8NB66	2214 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	DIDO1	Q9BTC0	2240 aa	Known RBP	4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	MED12	Q93074	2177 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	IGKV1D-37	A0A075B6S9	117 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	IGHV4OR15-8	A0A075B7B6	117 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	IGHV5-10-1	A0A0J9YXX1	117 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	PGP	A6NDG6	321 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	SRRM5	B3KS81	715 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	TMEM262	E9PQX1	116 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	ATP5L	O75964	103 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	IGLV2-11	P01706	119 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	GP9	P14770	177 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	PRDX2	P32119	198 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	MPV17	P39210	176 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	CEBPD	P49716	269 aa	Predicted RBP	4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	FXYD2	P54710	66 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	TCTA	P57738	103 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	CACNG7	P62955	275 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	RRN3P1	Q2M238	152 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	KLF17	Q5JT82	389 aa	Predicted RBP	4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	LYRM7	Q5U5X0	104 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	FAM104B	Q5XKR9	115 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131		Q6Q795	121 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	FAM159A	Q6UWV7	190 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	ZNF562	Q6V9R5	426 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	SBSPON	Q8IVN8	264 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	ORMDL3	Q8N138	153 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	CIART	Q8N365	385 aa	Predicted RBP	4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	TMEM158	Q8WZ71	300 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	LINC01600	Q96MT4	127 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	B4GALT7	Q9UBV7	327 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	HHLA3	Q9XRX5	114 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	KLF13	Q9Y2Y9	288 aa	Predicted RBP	4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	HILPDA	Q9Y5L2	63 aa		4.07	□□□□□ -1.76
TPM1-222	ENST00000560131	TRBV25-1	A0A075B6N4	114 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	IGHV3-43	A0A0B4J1X8	118 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	IGLV9-49	A0A0B4J1Y8	123 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	TRAV5	A0A0B4J249	113 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	TMEM89	A2RUT3	159 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	SAA2	P0DJI9	122 aa	Predicted RBP	4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	IGHV3-43D	P0DP04	118 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	PYY	P10082	97 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	FCER1G	P30273	86 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	FOXG1	P55316	489 aa	Predicted RBP	4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	LINC00205	P59089	165 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	WFDC2	Q14508	124 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	C17orf58	Q2M2W7	97 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	C12orf74	Q32Q52	190 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	RPL39P5	Q59GN2	51 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.06	□□□□□ -1.76
TPM1-222	ENST00000560131		Q6ZUT4	128 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	LINC00305	Q7Z4B0	112 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	MOB3B	Q86TA1	216 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	MDP1	Q86V88	176 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	PCP2	Q8IVA1	136 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	VKORC1L1	Q8N0U8	176 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	CD177	Q8N6Q3	437 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	C8orf31	Q8N9H6	132 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	OR8A1	Q8NGG7	326 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	TMEM167A	Q8TBQ9	72 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	PPDPFL	Q8WWR9	84 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	RAB37	Q96AX2	223 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	ZC2HC1A	Q96GY0	325 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	PRELID3A	Q96N28	172 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	FAM173A	Q9BQD7	235 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	CNFN	Q9BYD5	112 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131		Q9H3A6	140 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	NXT2	Q9NPJ8	142 aa	Known RBP	4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	CALY	Q9NYX4	217 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	GOLGB1	Q14789	3259 aa	Known RBP	4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	DSCAML1	Q8TD84	2053 aa		4.06	□□□□□ -1.76
TPM1-222	ENST00000560131	TRBV7-3	A0A075B6L6	115 aa		4.05	□□□□□ -1.76
TPM1-222	ENST00000560131	DEFB108A	A8MXU0	73 aa		4.05	□□□□□ -1.76
TPM1-222	ENST00000560131	ATP6V0E1	O15342	81 aa		4.05	□□□□□ -1.76
TPM1-222	ENST00000560131	SNAI2	O43623	268 aa		4.05	□□□□□ -1.76
TPM1-222	ENST00000560131	APOM	O95445	188 aa		4.05	□□□□□ -1.76
TPM1-222	ENST00000560131	IGHV3-9	P01782	118 aa		4.05	□□□□□ -1.76
TPM1-222	ENST00000560131	IGKC	P01834	107 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms