RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 C1QTNF4Q9BXJ3 329 aa12.24□□□□□ -0.45
RPL28-209ENST00000560055 SLC35B3Q9H1N7 401 aa12.24□□□□□ -0.45
RPL28-209ENST00000560055 DYNC2H1Q8NCM8 4307 aaKnown RBP12.23□□□□□ -0.45
RPL28-209ENST00000560055 A0A1W2PPV4 95 aa12.23□□□□□ -0.45
RPL28-209ENST00000560055 ZNF705EA8MWA4 302 aaPredicted RBP12.23□□□□□ -0.45
RPL28-209ENST00000560055 PRB4P10163 310 aaPredicted RBP12.23□□□□□ -0.45
RPL28-209ENST00000560055 CDC34P49427 236 aaPredicted RBP12.23□□□□□ -0.45
RPL28-209ENST00000560055 HIST1H1AQ02539 215 aaPredicted RBP12.23□□□□□ -0.45
RPL28-209ENST00000560055 PQLC2Q6ZP29 291 aa12.23□□□□□ -0.45
RPL28-209ENST00000560055 OR11H2Q8NH07 326 aa12.23□□□□□ -0.45
RPL28-209ENST00000560055 PHYHIPLQ96FC7 376 aa12.23□□□□□ -0.45
RPL28-209ENST00000560055 RARRES2Q99969 163 aa12.23□□□□□ -0.45
RPL28-209ENST00000560055 XCL2Q9UBD3 114 aa12.23□□□□□ -0.45
RPL28-209ENST00000560055 PRELID1Q9Y255 219 aa12.23□□□□□ -0.45
RPL28-209ENST00000560055 A0A1B0GVG6 124 aa12.22□□□□□ -0.45
RPL28-209ENST00000560055 M0R3E3 92 aa12.22□□□□□ -0.45
RPL28-209ENST00000560055 BCL2L11O43521 198 aa12.22□□□□□ -0.45
RPL28-209ENST00000560055 C1QBP02746 253 aa12.22□□□□□ -0.45
RPL28-209ENST00000560055 STAG3L2P0CL84 134 aa12.22□□□□□ -0.45
RPL28-209ENST00000560055 STAG3L3P0CL85 134 aa12.22□□□□□ -0.45
RPL28-209ENST00000560055 FXYD7P58549 80 aa12.22□□□□□ -0.45
RPL28-209ENST00000560055 UBE2L3P68036 154 aaKnown RBP12.22□□□□□ -0.45
RPL28-209ENST00000560055 AKAP14Q86UN6 197 aa12.22□□□□□ -0.45
RPL28-209ENST00000560055 EXOC3-AS1Q8N2X6 119 aa12.22□□□□□ -0.45
RPL28-209ENST00000560055 RAB24Q969Q5 203 aa12.22□□□□□ -0.45
RPL28-209ENST00000560055 ZNF705AQ6ZN79 300 aaPredicted RBP12.21□□□□□ -0.45
RPL28-209ENST00000560055 X6R8D5 127 aa12.21□□□□□ -0.45
RPL28-209ENST00000560055 A0A0J9YWU9 116 aa12.2□□□□□ -0.46
RPL28-209ENST00000560055 HMGB3O15347 200 aaKnown RBP12.2□□□□□ -0.46
RPL28-209ENST00000560055 ARL14EPLP0DKL9 152 aa12.2□□□□□ -0.46
RPL28-209ENST00000560055 ICAM4Q14773 271 aa12.2□□□□□ -0.46
RPL28-209ENST00000560055 TMUB2Q71RG4 321 aa12.2□□□□□ -0.46
RPL28-209ENST00000560055 LYPD1Q8N2G4 141 aa12.2□□□□□ -0.46
RPL28-209ENST00000560055 Q8NAQ8 132 aa12.2□□□□□ -0.46
RPL28-209ENST00000560055 SUN5Q8TC36 379 aa12.2□□□□□ -0.46
RPL28-209ENST00000560055 AAMDCQ9H7C9 122 aa12.2□□□□□ -0.46
RPL28-209ENST00000560055 KANTRA0A1W2PQU2 76 aa12.19□□□□□ -0.46
RPL28-209ENST00000560055 NPIPB6E9PJ23 425 aa12.19□□□□□ -0.46
RPL28-209ENST00000560055 BOLA2-SMG1P6H3BVE0 249 aa12.19□□□□□ -0.46
RPL28-209ENST00000560055 CRXO43186 299 aaPredicted RBP12.19□□□□□ -0.46
RPL28-209ENST00000560055 CD300CQ08708 224 aa12.19□□□□□ -0.46
RPL28-209ENST00000560055 ZNF726P1Q15940 193 aa12.19□□□□□ -0.46
RPL28-209ENST00000560055 SPINK13Q1W4C9 94 aa12.19□□□□□ -0.46
RPL28-209ENST00000560055 LGALSLQ3ZCW2 172 aaPredicted RBP12.19□□□□□ -0.46
RPL28-209ENST00000560055 SSX7Q7RTT5 188 aa12.19□□□□□ -0.46
RPL28-209ENST00000560055 OR10J6PQ8NGY7 276 aa12.19□□□□□ -0.46
RPL28-209ENST00000560055 MUC7Q8TAX7 377 aa12.19□□□□□ -0.46
RPL28-209ENST00000560055 ZNF471Q9BX82 626 aaPredicted RBP12.19□□□□□ -0.46
RPL28-209ENST00000560055 ACTR3CQ9C0K3 210 aaPredicted RBP12.19□□□□□ -0.46
RPL28-209ENST00000560055 C11orf68Q9H3H3 251 aaKnown RBP12.19□□□□□ -0.46
RPL28-209ENST00000560055 M0R2Z0 102 aa12.18□□□□□ -0.46
RPL28-209ENST00000560055 AMBPP02760 352 aa12.18□□□□□ -0.46
RPL28-209ENST00000560055 RANP62826 216 aaKnown RBP12.18□□□□□ -0.46
RPL28-209ENST00000560055 AKR1C8PQ5T2L2 129 aa12.18□□□□□ -0.46
RPL28-209ENST00000560055 C1orf158Q8N1D5 194 aa12.18□□□□□ -0.46
RPL28-209ENST00000560055 HYLS1Q96M11 299 aa12.18□□□□□ -0.46
RPL28-209ENST00000560055 IGF2BP2-AS1Q96M15 143 aa12.18□□□□□ -0.46
RPL28-209ENST00000560055 Q9H3A6 140 aa12.18□□□□□ -0.46
RPL28-209ENST00000560055 CTXND1A0A1B0GTU2 59 aa12.17□□□□□ -0.46
RPL28-209ENST00000560055 SEC11BP0C7V7 166 aa12.17□□□□□ -0.46
RPL28-209ENST00000560055 MIFP14174 115 aa12.17□□□□□ -0.46
RPL28-209ENST00000560055 GCHFRP30047 84 aa12.17□□□□□ -0.46
RPL28-209ENST00000560055 STOML3Q8TAV4 291 aa12.17□□□□□ -0.46
RPL28-209ENST00000560055 ODF3Q96PU9 254 aa12.17□□□□□ -0.46
RPL28-209ENST00000560055 PLA2G2EQ9NZK7 142 aa12.17□□□□□ -0.46
RPL28-209ENST00000560055 PLECQ15149 4684 aaKnown RBP12.17□□□□□ -0.46
RPL28-209ENST00000560055 PFDN1O60925 122 aa12.16□□□□□ -0.46
RPL28-209ENST00000560055 CT45A10P0DMU9 189 aa12.16□□□□□ -0.46
RPL28-209ENST00000560055 C9orf47Q6ZRZ4 202 aa12.16□□□□□ -0.46
RPL28-209ENST00000560055 BAP18Q8IXM2 172 aa12.16□□□□□ -0.46
RPL28-209ENST00000560055 NEU1Q99519 415 aa12.16□□□□□ -0.46
RPL28-209ENST00000560055 LYSTQ99698 3801 aa12.16□□□□□ -0.46
RPL28-209ENST00000560055 OTORQ9NRC9 128 aa12.16□□□□□ -0.46
RPL28-209ENST00000560055 IGHV4-28A0A0C4DH34 117 aa12.15□□□□□ -0.46
RPL28-209ENST00000560055 C3orf84H3BNL1 204 aa12.15□□□□□ -0.46
RPL28-209ENST00000560055 CXorf1O96002 111 aa12.15□□□□□ -0.46
RPL28-209ENST00000560055 INSP01308 110 aa12.15□□□□□ -0.46
RPL28-209ENST00000560055 RBMY1A1P0DJD3 496 aaKnown RBP12.15□□□□□ -0.46
RPL28-209ENST00000560055 RBMY1CP0DJD4 496 aa12.15□□□□□ -0.46
RPL28-209ENST00000560055 CDKN1BP46527 198 aa12.15□□□□□ -0.46
RPL28-209ENST00000560055 EIF5AP63241 154 aaKnown RBP12.15□□□□□ -0.46
RPL28-209ENST00000560055 RBMY1FQ15415 496 aaKnown RBP12.15□□□□□ -0.46
RPL28-209ENST00000560055 FAM19A4Q96LR4 140 aa12.15□□□□□ -0.46
RPL28-209ENST00000560055 LINC00477Q96M19 166 aa12.15□□□□□ -0.46
RPL28-209ENST00000560055 TMEM167BQ9NRX6 74 aa12.15□□□□□ -0.46
RPL28-209ENST00000560055 GOLT1BQ9Y3E0 138 aa12.15□□□□□ -0.46
RPL28-209ENST00000560055 TRAV12-2A0A075B6T6 113 aa12.14□□□□□ -0.47
RPL28-209ENST00000560055 IGKV2-40A0A087WW87 121 aaPredicted RBP12.14□□□□□ -0.47
RPL28-209ENST00000560055 IGKV2D-40P01614 121 aaPredicted RBP12.14□□□□□ -0.47
RPL28-209ENST00000560055 TPT1P13693 172 aaKnown RBP12.14□□□□□ -0.47
RPL28-209ENST00000560055 ERCC8Q13216 396 aa12.14□□□□□ -0.47
RPL28-209ENST00000560055 IL17DQ8TAD2 202 aa12.14□□□□□ -0.47
RPL28-209ENST00000560055 AGPAT4-IT1Q9H0P7 198 aa12.14□□□□□ -0.47
RPL28-209ENST00000560055 PPP1R14DQ9NXH3 145 aa12.14□□□□□ -0.47
RPL28-209ENST00000560055 TENM2Q9NT68 2774 aa12.13□□□□□ -0.47
RPL28-209ENST00000560055 RBAKDNA6NC62 111 aa12.13□□□□□ -0.47
RPL28-209ENST00000560055 SMIM9A6NGZ8 99 aa12.13□□□□□ -0.47
RPL28-209ENST00000560055 UMAD1C9J7I0 102 aa12.13□□□□□ -0.47
RPL28-209ENST00000560055 DEFB4AO15263 64 aa12.13□□□□□ -0.47
RPL28-209ENST00000560055 CSN1S1P47710 185 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms