RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 TMEM88Q6PEY1 159 aa14.46□□□□□ -0.09
CHRNA3-207ENST00000559941 OR10J6PQ8NGY7 276 aa14.46□□□□□ -0.09
CHRNA3-207ENST00000559941 NACAE9PAV3 2078 aa14.45□□□□□ -0.1
CHRNA3-207ENST00000559941 ZNF253O75346 499 aa14.45□□□□□ -0.1
CHRNA3-207ENST00000559941 MPDU1O75352 247 aa14.45□□□□□ -0.1
CHRNA3-207ENST00000559941 IFITM3Q01628 133 aa14.45□□□□□ -0.1
CHRNA3-207ENST00000559941 C20orf144Q9BQM9 153 aa14.45□□□□□ -0.1
CHRNA3-207ENST00000559941 ZNF586Q9NXT0 402 aa14.45□□□□□ -0.1
CHRNA3-207ENST00000559941 H7BYZ3 331 aa14.44□□□□□ -0.1
CHRNA3-207ENST00000559941 SIX6O95475 246 aa14.44□□□□□ -0.1
CHRNA3-207ENST00000559941 RLN2P04090 185 aa14.44□□□□□ -0.1
CHRNA3-207ENST00000559941 DEFB130BP0DP73 79 aa14.44□□□□□ -0.1
CHRNA3-207ENST00000559941 DEFB130AP0DP74 79 aa14.44□□□□□ -0.1
CHRNA3-207ENST00000559941 KIR3DS1Q14943 382 aa14.44□□□□□ -0.1
CHRNA3-207ENST00000559941 RNF212Q495C1 297 aa14.44□□□□□ -0.1
CHRNA3-207ENST00000559941 ZNF493Q6ZR52 646 aa14.44□□□□□ -0.1
CHRNA3-207ENST00000559941 LINC00336Q6ZUF6 198 aa14.44□□□□□ -0.1
CHRNA3-207ENST00000559941 UBE2DNLQ8IWF7 75 aa14.44□□□□□ -0.1
CHRNA3-207ENST00000559941 C16orf74Q96GX8 76 aa14.44□□□□□ -0.1
CHRNA3-207ENST00000559941 PARD6GQ9BYG4 376 aaPredicted RBP14.44□□□□□ -0.1
CHRNA3-207ENST00000559941 NMES1Q9C002 83 aa14.44□□□□□ -0.1
CHRNA3-207ENST00000559941 E5RGE8 158 aa14.43□□□□□ -0.1
CHRNA3-207ENST00000559941 PRAF2O60831 178 aa14.43□□□□□ -0.1
CHRNA3-207ENST00000559941 HTN1P15515 57 aa14.43□□□□□ -0.1
CHRNA3-207ENST00000559941 NHLH2Q02577 135 aa14.43□□□□□ -0.1
CHRNA3-207ENST00000559941 FCN2Q15485 313 aa14.43□□□□□ -0.1
CHRNA3-207ENST00000559941 LGALS9BQ3B8N2 356 aa14.43□□□□□ -0.1
CHRNA3-207ENST00000559941 C15orf53Q8NAA6 179 aa14.43□□□□□ -0.1
CHRNA3-207ENST00000559941 PTTG2Q9NZH5 202 aa14.43□□□□□ -0.1
CHRNA3-207ENST00000559941 TMEM14CQ9P0S9 112 aa14.43□□□□□ -0.1
CHRNA3-207ENST00000559941 INMT-MINDY4F8WBC2 141 aa14.42□□□□□ -0.1
CHRNA3-207ENST00000559941 GFI1BQ5VTD9 330 aa14.42□□□□□ -0.1
CHRNA3-207ENST00000559941 ODF3Q96PU9 254 aa14.42□□□□□ -0.1
CHRNA3-207ENST00000559941 NPCDR1Q9BY65 106 aa14.42□□□□□ -0.1
CHRNA3-207ENST00000559941 SLC25A31Q9H0C2 315 aa14.42□□□□□ -0.1
CHRNA3-207ENST00000559941 TIMM8BQ9Y5J9 83 aaPredicted RBP14.42□□□□□ -0.1
CHRNA3-207ENST00000559941 TRBV19A0A075B6N1 114 aa14.41□□□□□ -0.1
CHRNA3-207ENST00000559941 CBY3A6NI87 242 aa14.41□□□□□ -0.1
CHRNA3-207ENST00000559941 NPIPB6E9PJ23 425 aa14.41□□□□□ -0.1
CHRNA3-207ENST00000559941 M0R2N4 97 aa14.41□□□□□ -0.1
CHRNA3-207ENST00000559941 CT45A10P0DMU9 189 aa14.41□□□□□ -0.1
CHRNA3-207ENST00000559941 CYCSP99999 105 aaKnown RBP14.41□□□□□ -0.1
CHRNA3-207ENST00000559941 OR5C1Q8NGR4 320 aa14.41□□□□□ -0.1
CHRNA3-207ENST00000559941 RNASE8Q8TDE3 154 aaKnown RBP14.41□□□□□ -0.1
CHRNA3-207ENST00000559941 TMEM263Q8WUH6 116 aaKnown RBP14.41□□□□□ -0.1
CHRNA3-207ENST00000559941 MRPL53Q96EL3 112 aaKnown RBP14.41□□□□□ -0.1
CHRNA3-207ENST00000559941 OR5AC2Q9NZP5 309 aa14.41□□□□□ -0.1
CHRNA3-207ENST00000559941 H0YIZ8 118 aa14.4□□□□□ -0.1
CHRNA3-207ENST00000559941 ATP5G1P05496 136 aa14.4□□□□□ -0.1
CHRNA3-207ENST00000559941 HIST1H1EP10412 219 aaKnown RBP14.4□□□□□ -0.1
CHRNA3-207ENST00000559941 LEPP41159 167 aa14.4□□□□□ -0.1
CHRNA3-207ENST00000559941 ATP5G3P48201 142 aa14.4□□□□□ -0.1
CHRNA3-207ENST00000559941 GCSAMLQ5JQS6 135 aa14.4□□□□□ -0.1
CHRNA3-207ENST00000559941 NDUFB4O95168 129 aa14.39□□□□□ -0.11
CHRNA3-207ENST00000559941 PDE6HQ13956 83 aa14.39□□□□□ -0.11
CHRNA3-207ENST00000559941 LRRC37A5PQ49AS3 106 aa14.39□□□□□ -0.11
CHRNA3-207ENST00000559941 MARVELD1Q9BSK0 173 aa14.39□□□□□ -0.11
CHRNA3-207ENST00000559941 NOP10Q9NPE3 64 aaKnown RBP14.39□□□□□ -0.11
CHRNA3-207ENST00000559941 F5H768 121 aa14.38□□□□□ -0.11
CHRNA3-207ENST00000559941 M0R3E3 92 aa14.38□□□□□ -0.11
CHRNA3-207ENST00000559941 PYYP10082 97 aa14.38□□□□□ -0.11
CHRNA3-207ENST00000559941 CCDC28AQ8IWP9 274 aa14.38□□□□□ -0.11
CHRNA3-207ENST00000559941 THAP6Q8TBB0 222 aa14.38□□□□□ -0.11
CHRNA3-207ENST00000559941 PRELID1Q9Y255 219 aa14.38□□□□□ -0.11
CHRNA3-207ENST00000559941 TIMM9Q9Y5J7 89 aa14.38□□□□□ -0.11
CHRNA3-207ENST00000559941 IGLV2-18A0A075B6J9 118 aa14.37□□□□□ -0.11
CHRNA3-207ENST00000559941 RTL8CO15255 209 aa14.37□□□□□ -0.11
CHRNA3-207ENST00000559941 CLINT1Q14677 625 aa14.37□□□□□ -0.11
CHRNA3-207ENST00000559941 Q6ZR54 194 aa14.37□□□□□ -0.11
CHRNA3-207ENST00000559941 SLC25A2Q9BXI2 301 aa14.37□□□□□ -0.11
CHRNA3-207ENST00000559941 J3KRW8 73 aa14.36□□□□□ -0.11
CHRNA3-207ENST00000559941 H2BFSP57053 126 aa14.36□□□□□ -0.11
CHRNA3-207ENST00000559941 FAM167A-AS1Q96KT0 104 aa14.36□□□□□ -0.11
CHRNA3-207ENST00000559941 WDR61Q9GZS3 305 aaKnown RBP14.36□□□□□ -0.11
CHRNA3-207ENST00000559941 HERC2O95714 4834 aa14.36□□□□□ -0.11
CHRNA3-207ENST00000559941 TRAV12-3A0A0B4J271 114 aa14.35□□□□□ -0.11
CHRNA3-207ENST00000559941 A0A1B0GVY2 172 aa14.35□□□□□ -0.11
CHRNA3-207ENST00000559941 FAM3BP58499 235 aaPredicted RBP14.35□□□□□ -0.11
CHRNA3-207ENST00000559941 ERCC8Q13216 396 aa14.35□□□□□ -0.11
CHRNA3-207ENST00000559941 MIR17HGQ75NE6 70 aa14.35□□□□□ -0.11
CHRNA3-207ENST00000559941 LINC00612Q8N6U2 182 aa14.35□□□□□ -0.11
CHRNA3-207ENST00000559941 BLNKQ8WV28 456 aa14.35□□□□□ -0.11
CHRNA3-207ENST00000559941 PPP1R1CQ8WVI7 109 aa14.35□□□□□ -0.11
CHRNA3-207ENST00000559941 LINC00477Q96M19 166 aa14.35□□□□□ -0.11
CHRNA3-207ENST00000559941 KCNIP2Q9NS61 270 aa14.35□□□□□ -0.11
CHRNA3-207ENST00000559941 PKD1P98161 4303 aa14.34□□□□□ -0.11
CHRNA3-207ENST00000559941 SLC25A5P05141 298 aaKnown RBP14.34□□□□□ -0.11
CHRNA3-207ENST00000559941 DEFA1P59665 94 aa14.34□□□□□ -0.11
CHRNA3-207ENST00000559941 DEFA3P59666 94 aa14.34□□□□□ -0.11
CHRNA3-207ENST00000559941 EXOC3-AS1Q8N2X6 119 aa14.34□□□□□ -0.11
CHRNA3-207ENST00000559941 PYGO2Q9BRQ0 406 aa14.34□□□□□ -0.11
CHRNA3-207ENST00000559941 AGPAT4-IT1Q9H0P7 198 aa14.34□□□□□ -0.11
CHRNA3-207ENST00000559941 AAMDCQ9H7C9 122 aa14.34□□□□□ -0.11
CHRNA3-207ENST00000559941 DNAH11Q96DT5 4516 aa14.33□□□□□ -0.11
CHRNA3-207ENST00000559941 PRSS29PA6NIE9 313 aa14.33□□□□□ -0.12
CHRNA3-207ENST00000559941 NBEAP1P0C6P0 100 aa14.33□□□□□ -0.12
CHRNA3-207ENST00000559941 FAM19A4Q96LR4 140 aa14.33□□□□□ -0.12
CHRNA3-207ENST00000559941 ATG101Q9BSB4 218 aa14.33□□□□□ -0.12
CHRNA3-207ENST00000559941 MRPL32Q9BYC8 188 aaKnown RBP14.33□□□□□ -0.12
CHRNA3-207ENST00000559941 OR51M1Q9H341 326 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms