RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 F6UB75 175 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 K7EMT4 169 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 M0QZ24 198 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 M0R3E3 92 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 PAGE4O60829 102 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 NUDT3O95989 172 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 CXorf1O96002 111 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 ZNF705DP0CH99 300 aaPredicted RBP3.9□□□□□ -1.79
SPG11-220ENST00000559933 ZNF705BP0CI00 300 aaPredicted RBP3.9□□□□□ -1.79
SPG11-220ENST00000559933 RAB5CP51148 216 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 TAS2R45P59539 299 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 DEFB114Q30KQ6 69 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 TOR2AQ5JU69 321 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 FAM90A2PQ658T7 463 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 DPPA3Q6W0C5 159 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 ZNF575Q86XF7 245 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 RXFP4Q8TDU9 374 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 SGK494Q96LW2 274 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 MS4A6AQ9H2W1 248 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 PEMTQ9UBM1 199 aa3.9□□□□□ -1.79
SPG11-220ENST00000559933 NOTCH3Q9UM47 2321 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 IGKV2-40A0A087WW87 121 aaPredicted RBP3.89□□□□□ -1.79
SPG11-220ENST00000559933 LOC102723971A0A1B0GUV8 181 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 FAM74A7A6NL05 159 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 G3V4G9 280 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 SOCS3O14543 225 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 IGKV2D-40P01614 121 aaPredicted RBP3.89□□□□□ -1.79
SPG11-220ENST00000559933 PRB2P02812 416 aaPredicted RBP3.89□□□□□ -1.79
SPG11-220ENST00000559933 ZNF688P0C7X2 276 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 RPL7P18124 248 aaKnown RBP3.89□□□□□ -1.79
SPG11-220ENST00000559933 GALR1P47211 349 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 RANP62826 216 aaKnown RBP3.89□□□□□ -1.79
SPG11-220ENST00000559933 BLOC1S1P78537 153 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 GUCA2BQ16661 112 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 CT83Q5H943 113 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 CLLU1Q5K131 121 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 CST9LP1Q5W188 147 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 PQLC2Q6ZP29 291 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 COMMD7Q86VX2 200 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 BPIFA4PQ86YQ2 179 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 SLC7A5P1Q8MH63 180 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 LYPD6BQ8NI32 183 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 DCANP1Q8TF63 244 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 SAT2Q96F10 170 aaPredicted RBP3.89□□□□□ -1.79
SPG11-220ENST00000559933 NARS2Q96I59 477 aaKnown RBP3.89□□□□□ -1.79
SPG11-220ENST00000559933 LINC00052Q96N35 136 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 Q9H3A6 140 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 TMEM14CQ9P0S9 112 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 DNAH3Q8TD57 4116 aa3.89□□□□□ -1.79
SPG11-220ENST00000559933 A0A087X0K7 114 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 TRAV8-1A0A0A6YYK1 113 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 TRAV1-1A0A0B4J248 108 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 TRAV34A0A0B4J273 112 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 A0A1W2PS18 150 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 PGPA6NDG6 321 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 KNCNA6PVL3 124 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 C11orf94C9JXX5 98 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 K7EQG2 157 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 DNASE2O00115 360 aaPredicted RBP3.88□□□□□ -1.79
SPG11-220ENST00000559933 IGLV1-51P01701 117 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 CD7P09564 240 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 NBEAP1P0C6P0 100 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 HIST1H1EP10412 219 aaKnown RBP3.88□□□□□ -1.79
SPG11-220ENST00000559933 BCL2P10415 239 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 CEBPGP53567 150 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 CD81P60033 236 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 KRTAP10-11P60412 298 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 RAB14P61106 215 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 ERCC8Q13216 396 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 ODF3L2Q3SX64 289 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 PSMG4Q5JS54 123 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 C1orf194Q5T5A4 169 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 GDF5OSQ5U4N7 250 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 APRG1Q8IVJ8 170 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 ZNF738Q8NE65 137 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 SUN5Q8TC36 379 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 MARC2Q969Z3 335 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 GRAMD2BQ96HH9 432 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 LINC00479Q96M42 142 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 PRR25Q96S07 402 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 DERL1Q9BUN8 251 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 NRN1Q9NPD7 142 aa3.88□□□□□ -1.79
SPG11-220ENST00000559933 ZNF331Q9NQX6 463 aaPredicted RBP3.88□□□□□ -1.79
SPG11-220ENST00000559933 RBMY1BA6NDE4 496 aaKnown RBP3.87□□□□□ -1.79
SPG11-220ENST00000559933 RBMY1EA6NEQ0 496 aaKnown RBP3.87□□□□□ -1.79
SPG11-220ENST00000559933 HELTA6NFD8 242 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 RBFOX3A6NFN3 312 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 TSPAN4O14817 238 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 IGKV3-20P01619 116 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 HBE1P02100 147 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 SLC25A5P05141 298 aaKnown RBP3.87□□□□□ -1.79
SPG11-220ENST00000559933 RBMY1DP0C7P1 496 aaKnown RBP3.87□□□□□ -1.79
SPG11-220ENST00000559933 DEFB131AP59861 70 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 GUK1Q16774 197 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 ZNF674Q2M3X9 581 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 ZNF506Q5JVG8 444 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 RBPMS2Q6ZRY4 209 aaKnown RBP3.87□□□□□ -1.79
SPG11-220ENST00000559933 GOLT1AQ6ZVE7 132 aa3.87□□□□□ -1.79
SPG11-220ENST00000559933 NHLRC2Q8NBF2 726 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms