RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 LAMTOR2Q9Y2Q5 125 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 MINOS1-NBL1R4GNA1 71 aa7.82□□□□□ -1.16
LRRC28-216ENST00000559819 IGHV3-66A0A0C4DH42 116 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 hDV102S1A0JD36 115 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 A6NJY4 79 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 LINC01548A6NM66 108 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 NPSP0C0P6 89 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 CT45A10P0DMU9 189 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 CSN1S1P47710 185 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 HINT1P49773 126 aaPredicted RBP7.81□□□□□ -1.16
LRRC28-216ENST00000559819 PDE6HQ13956 83 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 FAM162BQ5T6X4 162 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 LYZL1Q6UWQ5 148 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 PMCHL2Q9BQD1 86 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 THYN1Q9P016 225 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 TMEM189A5PLL7 270 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 ATP6V0E1O15342 81 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 IGHG4P01861 327 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 ZNF80P51504 273 aaPredicted RBP7.81□□□□□ -1.16
LRRC28-216ENST00000559819 CYB5R2Q6BCY4 276 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 UNQ5815/PRO19632Q6UWF5 114 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 RABAC1Q9UI14 185 aa7.81□□□□□ -1.16
LRRC28-216ENST00000559819 SPTBN1Q01082 2364 aaKnown RBP7.81□□□□□ -1.16
LRRC28-216ENST00000559819 ASH1LQ9NR48 2969 aaKnown RBP7.81□□□□□ -1.16
LRRC28-216ENST00000559819 IGHV3OR16-13A0A075B7E8 117 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 IGHV3-74A0A0B4J1X5 117 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 IGHV2-70DA0A0C4DH43 119 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 OOSP1A8MZH6 123 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 FAM106CPP0CH98 169 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 SAA4P35542 130 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 FAM106AQ4KMX7 169 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 Q6ZVH6 145 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 LOC389332A0A1B0GUA5 103 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 G3V318 75 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 C19orf84I3L1E1 186 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 DLEU1O43261 78 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 RPL7P18124 248 aaKnown RBP7.8□□□□□ -1.16
LRRC28-216ENST00000559819 PSG9Q00887 426 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 ERCC8Q13216 396 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 ZNF124Q15973 351 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 C15orf32Q32M92 178 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 COL5A1-AS1Q5SY13 56 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 BPESC1Q9GZL8 116 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 IGHV3OR16-10A0A075B7F0 116 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 PRAC2D3DTV9 90 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 UQCRFS1P47985 274 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 LOXL1Q08397 574 aaPredicted RBP7.8□□□□□ -1.16
LRRC28-216ENST00000559819 AMN1Q8IY45 258 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 GATD1Q8NB37 220 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 PRR25Q96S07 402 aa7.8□□□□□ -1.16
LRRC28-216ENST00000559819 IGHV3-49A0A0A0MS15 119 aa7.79□□□□□ -1.16
LRRC28-216ENST00000559819 D6R8Y8 96 aa7.79□□□□□ -1.16
LRRC28-216ENST00000559819 CRXO43186 299 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-216ENST00000559819 CLEC3BP05452 202 aa7.79□□□□□ -1.16
LRRC28-216ENST00000559819 RHOGP84095 191 aa7.79□□□□□ -1.16
LRRC28-216ENST00000559819 TMEM95Q3KNT9 176 aa7.79□□□□□ -1.16
LRRC28-216ENST00000559819 S100A7AQ86SG5 101 aa7.79□□□□□ -1.16
LRRC28-216ENST00000559819 RNF182Q8N6D2 247 aa7.79□□□□□ -1.16
LRRC28-216ENST00000559819 FAM110DQ8TAY7 271 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-216ENST00000559819 AKAP6Q13023 2319 aa7.79□□□□□ -1.16
LRRC28-216ENST00000559819 SMKR1H3BMG3 65 aa7.79□□□□□ -1.16
LRRC28-216ENST00000559819 IFI27P40305 119 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-216ENST00000559819 UBE2E1P51965 193 aa7.79□□□□□ -1.16
LRRC28-216ENST00000559819 FXYD7P58549 80 aa7.79□□□□□ -1.16
LRRC28-216ENST00000559819 PIP4P2Q8N4L2 257 aa7.79□□□□□ -1.16
LRRC28-216ENST00000559819 ZNF502Q8TBZ5 544 aa7.79□□□□□ -1.16
LRRC28-216ENST00000559819 ZNF207O43670 478 aaKnown RBP7.78□□□□□ -1.16
LRRC28-216ENST00000559819 NCR2O95944 276 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 OR5AL1P0C617 328 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 LMO4P61968 165 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 CLEC19AQ6UXS0 136 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 PRSS3P2Q8NHM4 247 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 MAP1LC3CQ9BXW4 147 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 ZFAND3Q9H8U3 227 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 VPS13CQ709C8 3753 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 SPTBN4Q9H254 2564 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 CACNA1BQ00975 2339 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 EFNA4P52798 201 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 FA2HQ7L5A8 372 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 ZNF575Q86XF7 245 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 AP5S1Q9NUS5 200 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 GOLT1BQ9Y3E0 138 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 HIVEP3Q5T1R4 2406 aa7.78□□□□□ -1.16
LRRC28-216ENST00000559819 C20orf202A1L168 122 aa7.77□□□□□ -1.17
LRRC28-216ENST00000559819 Q6AWC8 147 aa7.77□□□□□ -1.17
LRRC28-216ENST00000559819 ZNF493Q6ZR52 646 aa7.77□□□□□ -1.17
LRRC28-216ENST00000559819 TMEM219Q86XT9 240 aa7.77□□□□□ -1.17
LRRC28-216ENST00000559819 TMEM190Q8WZ59 177 aa7.77□□□□□ -1.17
LRRC28-216ENST00000559819 CCDC140Q96MF4 163 aa7.77□□□□□ -1.17
LRRC28-216ENST00000559819 LINC00527Q9UJ94 153 aa7.77□□□□□ -1.17
LRRC28-216ENST00000559819 MRPS16Q9Y3D3 137 aaKnown RBP7.77□□□□□ -1.17
LRRC28-216ENST00000559819 CHD8Q9HCK8 2581 aa7.77□□□□□ -1.17
LRRC28-216ENST00000559819 A0A1B0GW15 77 aa7.77□□□□□ -1.17
LRRC28-216ENST00000559819 MRPL51Q4U2R6 128 aaKnown RBP7.77□□□□□ -1.17
LRRC28-216ENST00000559819 FAM104BQ5XKR9 115 aa7.77□□□□□ -1.17
LRRC28-216ENST00000559819 SIGLEC8Q9NYZ4 499 aa7.77□□□□□ -1.17
LRRC28-216ENST00000559819 NCOR2Q9Y618 2525 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 A0A096LNJ9 63 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 CLPSL1A2RUU4 121 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 SCGB2A1O75556 95 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms