RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 SAV1Q9H4B6 383 aaPredicted RBP6.63□□□□□ -1.35
HMG20A-209ENST00000559728 HLA-DRB4X5D2U9 266 aa6.63□□□□□ -1.35
HMG20A-209ENST00000559728 LOC102724200A0A096LPH7 203 aaPredicted RBP6.62□□□□□ -1.35
HMG20A-209ENST00000559728 CTXND1A0A1B0GTU2 59 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 A0A1W2PPV4 95 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 OR7C2O60412 319 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 ZNF705DP0CH99 300 aaPredicted RBP6.62□□□□□ -1.35
HMG20A-209ENST00000559728 ZNF705BP0CI00 300 aaPredicted RBP6.62□□□□□ -1.35
HMG20A-209ENST00000559728 RPL35AP18077 110 aaKnown RBP6.62□□□□□ -1.35
HMG20A-209ENST00000559728 C4BPBP20851 252 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 GCHFRP30047 84 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 ID1P41134 155 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 TAS2R45P59539 299 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 UBE2L3P68036 154 aaKnown RBP6.62□□□□□ -1.35
HMG20A-209ENST00000559728 AKR1C8PQ5T2L2 129 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 AMTNQ6UX39 209 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 PQLC2Q6ZP29 291 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 FOXI2Q6ZQN5 318 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 BLNKQ8WV28 456 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 MBD3L1Q8WWY6 194 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 TM2D3Q9BRN9 247 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 ACTR3CQ9C0K3 210 aaPredicted RBP6.62□□□□□ -1.35
HMG20A-209ENST00000559728 TMPRSS5Q9H3S3 457 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 TUBA4BQ9H853 241 aa6.62□□□□□ -1.35
HMG20A-209ENST00000559728 COL7A1Q02388 2944 aa6.61□□□□□ -1.35
HMG20A-209ENST00000559728 UMAD1C9J7I0 102 aa6.61□□□□□ -1.35
HMG20A-209ENST00000559728 SULT1A2P50226 295 aa6.61□□□□□ -1.35
HMG20A-209ENST00000559728 FGF8P55075 233 aaPredicted RBP6.61□□□□□ -1.35
HMG20A-209ENST00000559728 EIF5AP63241 154 aaKnown RBP6.61□□□□□ -1.35
HMG20A-209ENST00000559728 RPUSD4Q96CM3 377 aaKnown RBP6.61□□□□□ -1.35
HMG20A-209ENST00000559728 MRPL53Q96EL3 112 aaKnown RBP6.61□□□□□ -1.35
HMG20A-209ENST00000559728 CLUHP3Q96NS8 147 aa6.61□□□□□ -1.35
HMG20A-209ENST00000559728 RETNQ9HD89 108 aa6.61□□□□□ -1.35
HMG20A-209ENST00000559728 TENM3Q9P273 2699 aa6.6□□□□□ -1.35
HMG20A-209ENST00000559728 KIR2DL5BA0A0G2JN68 375 aa6.6□□□□□ -1.35
HMG20A-209ENST00000559728 KIR2DL5BA0A0G2JPC4 375 aa6.6□□□□□ -1.35
HMG20A-209ENST00000559728 CXorf1O96002 111 aa6.6□□□□□ -1.35
HMG20A-209ENST00000559728 CNN1P51911 297 aaKnown RBP6.6□□□□□ -1.35
HMG20A-209ENST00000559728 RANP62826 216 aaKnown RBP6.6□□□□□ -1.35
HMG20A-209ENST00000559728 CCL20P78556 96 aa6.6□□□□□ -1.35
HMG20A-209ENST00000559728 ICAM4Q14773 271 aa6.6□□□□□ -1.35
HMG20A-209ENST00000559728 FAM74A1Q5RGS3 127 aa6.6□□□□□ -1.35
HMG20A-209ENST00000559728 KIR2DL5AQ8N109 375 aa6.6□□□□□ -1.35
HMG20A-209ENST00000559728 LYPD1Q8N2G4 141 aa6.6□□□□□ -1.35
HMG20A-209ENST00000559728 CSNK1G2-AS1Q8NCQ2 148 aa6.6□□□□□ -1.35
HMG20A-209ENST00000559728 ZNF738Q8NE65 137 aa6.6□□□□□ -1.35
HMG20A-209ENST00000559728 OR8A1Q8NGG7 326 aa6.6□□□□□ -1.35
HMG20A-209ENST00000559728 KIR2DL5BQ8NHK3 375 aa6.6□□□□□ -1.35
HMG20A-209ENST00000559728 FAM213BQ8TBF2 198 aa6.6□□□□□ -1.35
HMG20A-209ENST00000559728 Q9H3A6 140 aa6.6□□□□□ -1.35
HMG20A-209ENST00000559728 MAP1LC3B2A6NCE7 125 aa6.59□□□□□ -1.35
HMG20A-209ENST00000559728 GGTLC3B5MD39 225 aa6.59□□□□□ -1.35
HMG20A-209ENST00000559728 NPIPB6E9PJ23 425 aa6.59□□□□□ -1.35
HMG20A-209ENST00000559728 CRXO43186 299 aaPredicted RBP6.59□□□□□ -1.35
HMG20A-209ENST00000559728 PSG9Q00887 426 aa6.59□□□□□ -1.35
HMG20A-209ENST00000559728 DPPA3Q6W0C5 159 aa6.59□□□□□ -1.35
HMG20A-209ENST00000559728 STHQ8IWL8 128 aa6.59□□□□□ -1.35
HMG20A-209ENST00000559728 LRRC20Q8TCA0 184 aa6.59□□□□□ -1.35
HMG20A-209ENST00000559728 FAM19A4Q96LR4 140 aa6.59□□□□□ -1.35
HMG20A-209ENST00000559728 OVOL2Q9BRP0 275 aa6.59□□□□□ -1.35
HMG20A-209ENST00000559728 MAP1LC3BQ9GZQ8 125 aa6.59□□□□□ -1.35
HMG20A-209ENST00000559728 CSTL1Q9H114 145 aa6.59□□□□□ -1.35
HMG20A-209ENST00000559728 SLC35B3Q9H1N7 401 aa6.59□□□□□ -1.35
HMG20A-209ENST00000559728 CLEC5AQ9NY25 188 aa6.59□□□□□ -1.35
HMG20A-209ENST00000559728 YTHDF2Q9Y5A9 579 aaKnown RBP6.59□□□□□ -1.35
HMG20A-209ENST00000559728 NBEAL2Q6ZNJ1 2754 aa6.59□□□□□ -1.35
HMG20A-209ENST00000559728 TRAV1-1A0A0B4J248 108 aa6.58□□□□□ -1.36
HMG20A-209ENST00000559728 IGKV3-20P01619 116 aa6.58□□□□□ -1.36
HMG20A-209ENST00000559728 CT45A10P0DMU9 189 aa6.58□□□□□ -1.36
HMG20A-209ENST00000559728 HIST1H1AQ02539 215 aaPredicted RBP6.58□□□□□ -1.36
HMG20A-209ENST00000559728 ERCC8Q13216 396 aa6.58□□□□□ -1.36
HMG20A-209ENST00000559728 KIR3DS1Q14943 382 aa6.58□□□□□ -1.36
HMG20A-209ENST00000559728 EBLN2Q6P2I7 272 aa6.58□□□□□ -1.36
HMG20A-209ENST00000559728 ALKAL2Q6UX46 152 aa6.58□□□□□ -1.36
HMG20A-209ENST00000559728 CCDC28AQ8IWP9 274 aa6.58□□□□□ -1.36
HMG20A-209ENST00000559728 SFT2D1Q8WV19 159 aa6.58□□□□□ -1.36
HMG20A-209ENST00000559728 AGPAT4-IT1Q9H0P7 198 aa6.58□□□□□ -1.36
HMG20A-209ENST00000559728 OTORQ9NRC9 128 aa6.58□□□□□ -1.36
HMG20A-209ENST00000559728 TMEM167BQ9NRX6 74 aa6.58□□□□□ -1.36
HMG20A-209ENST00000559728 PRELID1Q9Y255 219 aa6.58□□□□□ -1.36
HMG20A-209ENST00000559728 TGP01266 2768 aa6.57□□□□□ -1.36
HMG20A-209ENST00000559728 IGKV2-40A0A087WW87 121 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-209ENST00000559728 A0A1W2PRE2 83 aa6.57□□□□□ -1.36
HMG20A-209ENST00000559728 PGPA6NDG6 321 aa6.57□□□□□ -1.36
HMG20A-209ENST00000559728 FAM74A7A6NL05 159 aa6.57□□□□□ -1.36
HMG20A-209ENST00000559728 DIRC3C9JPN6 131 aa6.57□□□□□ -1.36
HMG20A-209ENST00000559728 UBE2CO00762 179 aa6.57□□□□□ -1.36
HMG20A-209ENST00000559728 CA1P00915 261 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-209ENST00000559728 IGKV2D-40P01614 121 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-209ENST00000559728 NHLRC4P0CG21 123 aaPredicted RBP6.57□□□□□ -1.36
HMG20A-209ENST00000559728 RBMY1A1P0DJD3 496 aaKnown RBP6.57□□□□□ -1.36
HMG20A-209ENST00000559728 RBMY1CP0DJD4 496 aa6.57□□□□□ -1.36
HMG20A-209ENST00000559728 RAB5CP51148 216 aa6.57□□□□□ -1.36
HMG20A-209ENST00000559728 APOC4P55056 127 aa6.57□□□□□ -1.36
HMG20A-209ENST00000559728 FXYD7P58549 80 aa6.57□□□□□ -1.36
HMG20A-209ENST00000559728 GNG5P63218 68 aa6.57□□□□□ -1.36
HMG20A-209ENST00000559728 RBMY1FQ15415 496 aaKnown RBP6.57□□□□□ -1.36
HMG20A-209ENST00000559728 EIF5AL1Q6IS14 154 aaKnown RBP6.57□□□□□ -1.36
HMG20A-209ENST00000559728 Q6ZWC4 215 aa6.57□□□□□ -1.36
HMG20A-209ENST00000559728 OR4B1Q8NGF8 309 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms