RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 LINC00588Q9Y4M8 146 aa14.33□□□□□ -0.12
TSPAN3-206ENST00000559373 DYNC1H1Q14204 4646 aaKnown RBP14.32□□□□□ -0.12
TSPAN3-206ENST00000559373 UBE2L5PA0A1B0GUS4 154 aa14.32□□□□□ -0.12
TSPAN3-206ENST00000559373 CT45A10P0DMU9 189 aa14.32□□□□□ -0.12
TSPAN3-206ENST00000559373 CXCL2P19875 107 aa14.32□□□□□ -0.12
TSPAN3-206ENST00000559373 S100A10P60903 97 aa14.32□□□□□ -0.12
TSPAN3-206ENST00000559373 ZNF431Q8TF32 576 aaPredicted RBP14.32□□□□□ -0.12
TSPAN3-206ENST00000559373 TMEM263Q8WUH6 116 aaKnown RBP14.32□□□□□ -0.12
TSPAN3-206ENST00000559373 C11orf1Q9H5F2 150 aa14.32□□□□□ -0.12
TSPAN3-206ENST00000559373 TRAV12-3A0A0B4J271 114 aa14.31□□□□□ -0.12
TSPAN3-206ENST00000559373 A0A0J9YY99 117 aa14.31□□□□□ -0.12
TSPAN3-206ENST00000559373 GAGE12BA1L429 117 aa14.31□□□□□ -0.12
TSPAN3-206ENST00000559373 H7BYZ3 331 aa14.31□□□□□ -0.12
TSPAN3-206ENST00000559373 GAGE7O76087 117 aa14.31□□□□□ -0.12
TSPAN3-206ENST00000559373 GAGE12FP0CL80 117 aa14.31□□□□□ -0.12
TSPAN3-206ENST00000559373 GAGE12GP0CL81 117 aa14.31□□□□□ -0.12
TSPAN3-206ENST00000559373 GAGE12IP0CL82 117 aa14.31□□□□□ -0.12
TSPAN3-206ENST00000559373 Q6ZRG5 221 aa14.31□□□□□ -0.12
TSPAN3-206ENST00000559373 ZNF586Q9NXT0 402 aa14.31□□□□□ -0.12
TSPAN3-206ENST00000559373 RNF24Q9Y225 148 aa14.31□□□□□ -0.12
TSPAN3-206ENST00000559373 NBDYA0A0U1RRE5 68 aa14.3□□□□□ -0.12
TSPAN3-206ENST00000559373 IGSF23A1L1A6 192 aa14.3□□□□□ -0.12
TSPAN3-206ENST00000559373 BAXQ07812 192 aa14.3□□□□□ -0.12
TSPAN3-206ENST00000559373 ERCC8Q13216 396 aa14.3□□□□□ -0.12
TSPAN3-206ENST00000559373 CLINT1Q14677 625 aa14.3□□□□□ -0.12
TSPAN3-206ENST00000559373 C12orf45Q8N5I9 185 aaPredicted RBP14.3□□□□□ -0.12
TSPAN3-206ENST00000559373 C2orf50Q96LR7 162 aa14.3□□□□□ -0.12
TSPAN3-206ENST00000559373 UQCC1Q9NVA1 299 aa14.3□□□□□ -0.12
TSPAN3-206ENST00000559373 PXMP4Q9Y6I8 212 aa14.3□□□□□ -0.12
TSPAN3-206ENST00000559373 TRAV26-1A0A087WT03 109 aa14.29□□□□□ -0.12
TSPAN3-206ENST00000559373 CCL18P55774 89 aa14.29□□□□□ -0.12
TSPAN3-206ENST00000559373 RAB31Q13636 194 aa14.29□□□□□ -0.12
TSPAN3-206ENST00000559373 RAB32Q13637 225 aa14.29□□□□□ -0.12
TSPAN3-206ENST00000559373 CNPY1Q3B7I2 92 aa14.29□□□□□ -0.12
TSPAN3-206ENST00000559373 ZNF493Q6ZR52 646 aa14.29□□□□□ -0.12
TSPAN3-206ENST00000559373 SSX7Q7RTT5 188 aa14.29□□□□□ -0.12
TSPAN3-206ENST00000559373 WDR83OSQ9Y284 106 aa14.29□□□□□ -0.12
TSPAN3-206ENST00000559373 M0R3E3 92 aa14.28□□□□□ -0.12
TSPAN3-206ENST00000559373 H2AFB2P0C5Z0 115 aa14.28□□□□□ -0.12
TSPAN3-206ENST00000559373 HOXA5P20719 270 aa14.28□□□□□ -0.12
TSPAN3-206ENST00000559373 FAM3BP58499 235 aaPredicted RBP14.28□□□□□ -0.12
TSPAN3-206ENST00000559373 CCDC28AQ8IWP9 274 aa14.28□□□□□ -0.12
TSPAN3-206ENST00000559373 OR1L4Q8NGR5 311 aa14.28□□□□□ -0.12
TSPAN3-206ENST00000559373 DNAH11Q96DT5 4516 aa14.28□□□□□ -0.12
TSPAN3-206ENST00000559373 SLC39A9Q9NUM3 307 aa14.28□□□□□ -0.12
TSPAN3-206ENST00000559373 PYYP10082 97 aa14.27□□□□□ -0.13
TSPAN3-206ENST00000559373 FGF7P21781 194 aa14.27□□□□□ -0.13
TSPAN3-206ENST00000559373 GCSAMLQ5JQS6 135 aa14.27□□□□□ -0.13
TSPAN3-206ENST00000559373 TMEM252Q8N6L7 170 aa14.27□□□□□ -0.13
TSPAN3-206ENST00000559373 GNPNAT1Q96EK6 184 aaPredicted RBP14.27□□□□□ -0.13
TSPAN3-206ENST00000559373 KRTAP4-5Q9BYR2 181 aa14.27□□□□□ -0.13
TSPAN3-206ENST00000559373 C6orf223Q8N319 242 aa14.26□□□□□ -0.13
TSPAN3-206ENST00000559373 BLNKQ8WV28 456 aa14.26□□□□□ -0.13
TSPAN3-206ENST00000559373 C20orf144Q9BQM9 153 aa14.26□□□□□ -0.13
TSPAN3-206ENST00000559373 LYRM2Q9NU23 88 aaPredicted RBP14.26□□□□□ -0.13
TSPAN3-206ENST00000559373 SNURFLB1AK76 121 aa14.25□□□□□ -0.13
TSPAN3-206ENST00000559373 NPIPB6E9PJ23 425 aa14.25□□□□□ -0.13
TSPAN3-206ENST00000559373 RLN2P04090 185 aa14.25□□□□□ -0.13
TSPAN3-206ENST00000559373 PVALBP20472 110 aaPredicted RBP14.25□□□□□ -0.13
TSPAN3-206ENST00000559373 LEPP41159 167 aa14.25□□□□□ -0.13
TSPAN3-206ENST00000559373 SULT1A1P50225 295 aa14.25□□□□□ -0.13
TSPAN3-206ENST00000559373 VWC2Q2TAL6 325 aa14.25□□□□□ -0.13
TSPAN3-206ENST00000559373 Q6ZTI0 123 aa14.25□□□□□ -0.13
TSPAN3-206ENST00000559373 PFDN5Q99471 154 aa14.25□□□□□ -0.13
TSPAN3-206ENST00000559373 TMPRSS5Q9H3S3 457 aa14.25□□□□□ -0.13
TSPAN3-206ENST00000559373 S100A11P31949 105 aa14.24□□□□□ -0.13
TSPAN3-206ENST00000559373 RPL29P47914 159 aaKnown RBP14.24□□□□□ -0.13
TSPAN3-206ENST00000559373 CD300CQ08708 224 aa14.24□□□□□ -0.13
TSPAN3-206ENST00000559373 IL15RAQ13261 267 aa14.24□□□□□ -0.13
TSPAN3-206ENST00000559373 EXOC3-AS1Q8N2X6 119 aa14.24□□□□□ -0.13
TSPAN3-206ENST00000559373 LINC00612Q8N6U2 182 aa14.24□□□□□ -0.13
TSPAN3-206ENST00000559373 Q9H8V8 135 aa14.24□□□□□ -0.13
TSPAN3-206ENST00000559373 GPN1Q9HCN4 374 aaPredicted RBP14.24□□□□□ -0.13
TSPAN3-206ENST00000559373 TRBV19A0A075B6N1 114 aa14.23□□□□□ -0.13
TSPAN3-206ENST00000559373 FAM240BA0A1B0GVZ2 78 aa14.23□□□□□ -0.13
TSPAN3-206ENST00000559373 NDUFB4O95168 129 aa14.23□□□□□ -0.13
TSPAN3-206ENST00000559373 SIX6O95475 246 aa14.23□□□□□ -0.13
TSPAN3-206ENST00000559373 M6PRP20645 277 aa14.23□□□□□ -0.13
TSPAN3-206ENST00000559373 BTN1A1Q13410 526 aa14.23□□□□□ -0.13
TSPAN3-206ENST00000559373 GUK1Q16774 197 aa14.23□□□□□ -0.13
TSPAN3-206ENST00000559373 KRTAP1-5Q9BYS1 174 aa14.23□□□□□ -0.13
TSPAN3-206ENST00000559373 GSN-AS1Q9NRJ2 163 aa14.23□□□□□ -0.13
TSPAN3-206ENST00000559373 C16orf90A8MZG2 172 aa14.22□□□□□ -0.13
TSPAN3-206ENST00000559373 RNASE4P34096 147 aaKnown RBP14.22□□□□□ -0.13
TSPAN3-206ENST00000559373 NHLH2Q02577 135 aa14.22□□□□□ -0.13
TSPAN3-206ENST00000559373 ESRGQ1W209 222 aa14.22□□□□□ -0.13
TSPAN3-206ENST00000559373 Q6ZQT7 251 aa14.22□□□□□ -0.13
TSPAN3-206ENST00000559373 STX12Q86Y82 276 aa14.22□□□□□ -0.13
TSPAN3-206ENST00000559373 THAP6Q8TBB0 222 aa14.22□□□□□ -0.13
TSPAN3-206ENST00000559373 RXFP4Q8TDU9 374 aa14.22□□□□□ -0.13
TSPAN3-206ENST00000559373 TIMM9Q9Y5J7 89 aa14.22□□□□□ -0.13
TSPAN3-206ENST00000559373 IGKV2-40A0A087WW87 121 aaPredicted RBP14.21□□□□□ -0.13
TSPAN3-206ENST00000559373 IGKV2D-40P01614 121 aaPredicted RBP14.21□□□□□ -0.13
TSPAN3-206ENST00000559373 HBG1P69891 147 aa14.21□□□□□ -0.13
TSPAN3-206ENST00000559373 HBG2P69892 147 aa14.21□□□□□ -0.13
TSPAN3-206ENST00000559373 AGPAT4-IT1Q9H0P7 198 aa14.21□□□□□ -0.13
TSPAN3-206ENST00000559373 C7orf71A4D174 169 aa14.2□□□□□ -0.14
TSPAN3-206ENST00000559373 FAM122CQ6P4D5 195 aa14.2□□□□□ -0.14
TSPAN3-206ENST00000559373 ODF3Q96PU9 254 aa14.2□□□□□ -0.14
TSPAN3-206ENST00000559373 PYGO2Q9BRQ0 406 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms