RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ZNF705EA8MWA4 302 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-207ENST00000559309 GGTLC3B5MD39 225 aa10.92□□□□□ -0.66
SNRPA1-207ENST00000559309 PRAC2D3DTV9 90 aa10.92□□□□□ -0.66
SNRPA1-207ENST00000559309 M0R3E3 92 aa10.92□□□□□ -0.66
SNRPA1-207ENST00000559309 HLA-DRB4P13762 266 aa10.92□□□□□ -0.66
SNRPA1-207ENST00000559309 DEFB1P60022 68 aa10.92□□□□□ -0.66
SNRPA1-207ENST00000559309 BLOC1S1P78537 153 aa10.92□□□□□ -0.66
SNRPA1-207ENST00000559309 GDF5OSQ5U4N7 250 aa10.92□□□□□ -0.66
SNRPA1-207ENST00000559309 TRPT1Q86TN4 253 aaKnown RBP10.92□□□□□ -0.66
SNRPA1-207ENST00000559309 YTHDF2Q9Y5A9 579 aaKnown RBP10.92□□□□□ -0.66
SNRPA1-207ENST00000559309 HLA-DRB4X5D2U9 266 aa10.92□□□□□ -0.66
SNRPA1-207ENST00000559309 H3BMM0 161 aa10.91□□□□□ -0.66
SNRPA1-207ENST00000559309 IFNA7P01567 189 aa10.91□□□□□ -0.66
SNRPA1-207ENST00000559309 HBE1P02100 147 aa10.91□□□□□ -0.66
SNRPA1-207ENST00000559309 PRB2P02812 416 aaPredicted RBP10.91□□□□□ -0.66
SNRPA1-207ENST00000559309 NMBP08949 121 aa10.91□□□□□ -0.66
SNRPA1-207ENST00000559309 IGHV4-30-4P0DP06 118 aa10.91□□□□□ -0.66
SNRPA1-207ENST00000559309 RANP62826 216 aaKnown RBP10.91□□□□□ -0.66
SNRPA1-207ENST00000559309 ICAM4Q14773 271 aa10.91□□□□□ -0.66
SNRPA1-207ENST00000559309 RPUSD4Q96CM3 377 aaKnown RBP10.91□□□□□ -0.66
SNRPA1-207ENST00000559309 HUWE1Q7Z6Z7 4374 aaKnown RBP10.91□□□□□ -0.66
SNRPA1-207ENST00000559309 AGRNO00468 2067 aa10.91□□□□□ -0.66
SNRPA1-207ENST00000559309 RBMY1BA6NDE4 496 aaKnown RBP10.9□□□□□ -0.66
SNRPA1-207ENST00000559309 RBMY1EA6NEQ0 496 aaKnown RBP10.9□□□□□ -0.66
SNRPA1-207ENST00000559309 ZNF705FA8MVS1 300 aaPredicted RBP10.9□□□□□ -0.66
SNRPA1-207ENST00000559309 RBMY1DP0C7P1 496 aaKnown RBP10.9□□□□□ -0.66
SNRPA1-207ENST00000559309 PPT1P50897 306 aa10.9□□□□□ -0.66
SNRPA1-207ENST00000559309 AMTNQ6UX39 209 aa10.9□□□□□ -0.66
SNRPA1-207ENST00000559309 OR8A1Q8NGG7 326 aa10.9□□□□□ -0.66
SNRPA1-207ENST00000559309 NKX6-2Q9C056 277 aaPredicted RBP10.9□□□□□ -0.66
SNRPA1-207ENST00000559309 AAMDCQ9H7C9 122 aa10.9□□□□□ -0.66
SNRPA1-207ENST00000559309 PPP1R14DQ9NXH3 145 aa10.9□□□□□ -0.66
SNRPA1-207ENST00000559309 NPIPB6E9PJ23 425 aa10.89□□□□□ -0.67
SNRPA1-207ENST00000559309 F6UB75 175 aa10.89□□□□□ -0.67
SNRPA1-207ENST00000559309 FAM19A4Q96LR4 140 aa10.89□□□□□ -0.67
SNRPA1-207ENST00000559309 LINC00052Q96N35 136 aa10.89□□□□□ -0.67
SNRPA1-207ENST00000559309 SRD5A3Q9H8P0 318 aa10.89□□□□□ -0.67
SNRPA1-207ENST00000559309 RBAKDNA6NC62 111 aa10.88□□□□□ -0.67
SNRPA1-207ENST00000559309 PGPA6NDG6 321 aa10.88□□□□□ -0.67
SNRPA1-207ENST00000559309 KNCNA6PVL3 124 aa10.88□□□□□ -0.67
SNRPA1-207ENST00000559309 DIRC3C9JPN6 131 aa10.88□□□□□ -0.67
SNRPA1-207ENST00000559309 RGS13O14921 159 aa10.88□□□□□ -0.67
SNRPA1-207ENST00000559309 SLC25A5P05141 298 aaKnown RBP10.88□□□□□ -0.67
SNRPA1-207ENST00000559309 GIG44P09565 113 aaPredicted RBP10.88□□□□□ -0.67
SNRPA1-207ENST00000559309 C9orf47Q6ZRZ4 202 aa10.88□□□□□ -0.67
SNRPA1-207ENST00000559309 ZNF767PQ75MW2 155 aa10.88□□□□□ -0.67
SNRPA1-207ENST00000559309 C5orf17Q8NAS9 161 aa10.88□□□□□ -0.67
SNRPA1-207ENST00000559309 ZNF738Q8NE65 137 aa10.88□□□□□ -0.67
SNRPA1-207ENST00000559309 RXFP4Q8TDU9 374 aa10.88□□□□□ -0.67
SNRPA1-207ENST00000559309 TCEAL7Q9BRU2 100 aa10.88□□□□□ -0.67
SNRPA1-207ENST00000559309 MANBALQ9NQG1 85 aa10.88□□□□□ -0.67
SNRPA1-207ENST00000559309 NBEAL2Q6ZNJ1 2754 aa10.87□□□□□ -0.67
SNRPA1-207ENST00000559309 KIR2DL5BA0A0G2JN68 375 aa10.87□□□□□ -0.67
SNRPA1-207ENST00000559309 KIR2DL5BA0A0G2JPC4 375 aa10.87□□□□□ -0.67
SNRPA1-207ENST00000559309 TEX46H3BTG2 121 aa10.87□□□□□ -0.67
SNRPA1-207ENST00000559309 PAGE4O60829 102 aa10.87□□□□□ -0.67
SNRPA1-207ENST00000559309 NDUFS6O75380 124 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-207ENST00000559309 SUMO1P63165 101 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-207ENST00000559309 KIR2DL5AQ8N109 375 aa10.87□□□□□ -0.67
SNRPA1-207ENST00000559309 KIR2DL5BQ8NHK3 375 aa10.87□□□□□ -0.67
SNRPA1-207ENST00000559309 ODF3Q96PU9 254 aa10.87□□□□□ -0.67
SNRPA1-207ENST00000559309 TXNDC17Q9BRA2 123 aa10.87□□□□□ -0.67
SNRPA1-207ENST00000559309 EPDR1Q9UM22 224 aa10.87□□□□□ -0.67
SNRPA1-207ENST00000559309 DUSP14O95147 198 aaKnown RBP10.86□□□□□ -0.67
SNRPA1-207ENST00000559309 IGLV2-11P01706 119 aa10.86□□□□□ -0.67
SNRPA1-207ENST00000559309 TCRAP04437 139 aa10.86□□□□□ -0.67
SNRPA1-207ENST00000559309 FRMD6-AS1P0C7T7 363 aa10.86□□□□□ -0.67
SNRPA1-207ENST00000559309 ATP5G3P48201 142 aa10.86□□□□□ -0.67
SNRPA1-207ENST00000559309 CNN1P51911 297 aaKnown RBP10.86□□□□□ -0.67
SNRPA1-207ENST00000559309 ACTL10Q5JWF8 245 aa10.86□□□□□ -0.67
SNRPA1-207ENST00000559309 KLF12Q9Y4X4 402 aa10.86□□□□□ -0.67
SNRPA1-207ENST00000559309 TRBV7-9A0A0J9YWB2 115 aa10.85□□□□□ -0.67
SNRPA1-207ENST00000559309 A0A1B0GV50 99 aa10.85□□□□□ -0.67
SNRPA1-207ENST00000559309 SERTM2A0A1B0GWG4 89 aa10.85□□□□□ -0.67
SNRPA1-207ENST00000559309 UBE2G2P60604 165 aa10.85□□□□□ -0.67
SNRPA1-207ENST00000559309 EBLN2Q6P2I7 272 aa10.85□□□□□ -0.67
SNRPA1-207ENST00000559309 AGPAT4-IT1Q9H0P7 198 aa10.85□□□□□ -0.67
SNRPA1-207ENST00000559309 KMT2CQ8NEZ4 4911 aaKnown RBP10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 LOC102724200A0A096LPH7 203 aaPredicted RBP10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 LOC102723971A0A1B0GUV8 181 aa10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 ZNF705DP0CH99 300 aaPredicted RBP10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 ZNF705BP0CI00 300 aaPredicted RBP10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 CT45A10P0DMU9 189 aa10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 BCL2P10415 239 aa10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 TAGLN2P37802 199 aaKnown RBP10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 CLLU1Q5K131 121 aa10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 STHQ8IWL8 128 aa10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 IQCF2Q8IXL9 164 aa10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 CSNK1G2-AS1Q8NCQ2 148 aa10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 C2CD4CQ8TF44 421 aa10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 HIST1H2BAQ96A08 127 aa10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 C11orf52Q96A22 123 aa10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 LINC00477Q96M19 166 aa10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 FAM210AQ96ND0 272 aa10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 VGLL1Q99990 258 aa10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 ATG101Q9BSB4 218 aa10.84□□□□□ -0.67
SNRPA1-207ENST00000559309 IGKV2-40A0A087WW87 121 aaPredicted RBP10.83□□□□□ -0.68
SNRPA1-207ENST00000559309 TRBV6-1A0A0K0K1D8 114 aa10.83□□□□□ -0.68
SNRPA1-207ENST00000559309 CRXO43186 299 aaPredicted RBP10.83□□□□□ -0.68
SNRPA1-207ENST00000559309 IGKV2D-40P01614 121 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms