RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 SNRPCP09234 159 aaKnown RBP11.16□□□□□ -0.62
CDC42BPB-205ENST00000559245 CXCL2P19875 107 aa11.16□□□□□ -0.62
CDC42BPB-205ENST00000559245 XGP55808 180 aa11.16□□□□□ -0.62
CDC42BPB-205ENST00000559245 PPP1R1AQ13522 171 aa11.16□□□□□ -0.62
CDC42BPB-205ENST00000559245 SLC50A1Q9BRV3 221 aa11.16□□□□□ -0.62
CDC42BPB-205ENST00000559245 ARV1Q9H2C2 271 aa11.16□□□□□ -0.62
CDC42BPB-205ENST00000559245 PSENENQ9NZ42 101 aa11.16□□□□□ -0.62
CDC42BPB-205ENST00000559245 RNF24Q9Y225 148 aa11.16□□□□□ -0.62
CDC42BPB-205ENST00000559245 FLG2Q5D862 2391 aaPredicted RBP11.15□□□□□ -0.62
CDC42BPB-205ENST00000559245 A0A096LPF7 62 aa11.15□□□□□ -0.62
CDC42BPB-205ENST00000559245 PRAC2D3DTV9 90 aa11.15□□□□□ -0.62
CDC42BPB-205ENST00000559245 EREGO14944 169 aa11.15□□□□□ -0.62
CDC42BPB-205ENST00000559245 INPP1P49441 399 aa11.15□□□□□ -0.62
CDC42BPB-205ENST00000559245 RRAS2P62070 204 aaPredicted RBP11.15□□□□□ -0.62
CDC42BPB-205ENST00000559245 POLR2GP62487 172 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDC42BPB-205ENST00000559245 Q6ZTI0 123 aa11.15□□□□□ -0.62
CDC42BPB-205ENST00000559245 VSIG2Q96IQ7 327 aa11.15□□□□□ -0.62
CDC42BPB-205ENST00000559245 NPVFQ9HCQ7 196 aa11.15□□□□□ -0.62
CDC42BPB-205ENST00000559245 J3KRW8 73 aa11.14□□□□□ -0.63
CDC42BPB-205ENST00000559245 SIVA1O15304 175 aa11.14□□□□□ -0.63
CDC42BPB-205ENST00000559245 CCNKO75909 580 aa11.14□□□□□ -0.63
CDC42BPB-205ENST00000559245 NDUFB6O95139 128 aa11.14□□□□□ -0.63
CDC42BPB-205ENST00000559245 ID3Q02535 119 aa11.14□□□□□ -0.63
CDC42BPB-205ENST00000559245 DAZ2Q13117 558 aaKnown RBP11.14□□□□□ -0.63
CDC42BPB-205ENST00000559245 RGS21Q2M5E4 152 aa11.14□□□□□ -0.63
CDC42BPB-205ENST00000559245 Q5VSD8 79 aa11.14□□□□□ -0.63
CDC42BPB-205ENST00000559245 MZT2BQ6NZ67 158 aa11.14□□□□□ -0.63
CDC42BPB-205ENST00000559245 SLC25A21Q9BQT8 299 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPB-205ENST00000559245 MYCBP2O75592 4640 aa11.13□□□□□ -0.63
CDC42BPB-205ENST00000559245 TRAV12-3A0A0B4J271 114 aa11.13□□□□□ -0.63
CDC42BPB-205ENST00000559245 K7EPK0 472 aa11.13□□□□□ -0.63
CDC42BPB-205ENST00000559245 ERVFC1-1P60608 527 aa11.13□□□□□ -0.63
CDC42BPB-205ENST00000559245 SLC38A11Q08AI6 406 aa11.13□□□□□ -0.63
CDC42BPB-205ENST00000559245 CDPF1Q6NVV7 123 aa11.13□□□□□ -0.63
CDC42BPB-205ENST00000559245 LINC00305Q7Z4B0 112 aa11.13□□□□□ -0.63
CDC42BPB-205ENST00000559245 NRARPQ7Z6K4 114 aa11.13□□□□□ -0.63
CDC42BPB-205ENST00000559245 FRZBQ92765 325 aa11.13□□□□□ -0.63
CDC42BPB-205ENST00000559245 H3BTX0 84 aa11.12□□□□□ -0.63
CDC42BPB-205ENST00000559245 SLC17A3O00476 420 aa11.12□□□□□ -0.63
CDC42BPB-205ENST00000559245 SSSCA1O60232 199 aa11.12□□□□□ -0.63
CDC42BPB-205ENST00000559245 METTL15P1P0C7V9 234 aa11.12□□□□□ -0.63
CDC42BPB-205ENST00000559245 PXDC1Q5TGL8 231 aa11.12□□□□□ -0.63
CDC42BPB-205ENST00000559245 TEPPQ6URK8 271 aa11.12□□□□□ -0.63
CDC42BPB-205ENST00000559245 BPIFA4PQ86YQ2 179 aa11.12□□□□□ -0.63
CDC42BPB-205ENST00000559245 ZBTB8BQ8NAP8 495 aaPredicted RBP11.12□□□□□ -0.63
CDC42BPB-205ENST00000559245 PYGO2Q9BRQ0 406 aa11.12□□□□□ -0.63
CDC42BPB-205ENST00000559245 TRGV2A0A075B6R0 118 aa11.11□□□□□ -0.63
CDC42BPB-205ENST00000559245 LINC00854A0A1B0GVQ3 168 aa11.11□□□□□ -0.63
CDC42BPB-205ENST00000559245 FNDC10F2Z333 226 aa11.11□□□□□ -0.63
CDC42BPB-205ENST00000559245 GOSR2O14653 212 aa11.11□□□□□ -0.63
CDC42BPB-205ENST00000559245 TCRBP04435 133 aa11.11□□□□□ -0.63
CDC42BPB-205ENST00000559245 CT45A10P0DMU9 189 aa11.11□□□□□ -0.63
CDC42BPB-205ENST00000559245 LEPP41159 167 aa11.11□□□□□ -0.63
CDC42BPB-205ENST00000559245 TMEM14EPQ6UXP3 125 aa11.11□□□□□ -0.63
CDC42BPB-205ENST00000559245 ZNF431Q8TF32 576 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPB-205ENST00000559245 SMIM8Q96KF7 97 aa11.11□□□□□ -0.63
CDC42BPB-205ENST00000559245 ODF3Q96PU9 254 aa11.11□□□□□ -0.63
CDC42BPB-205ENST00000559245 MARVELD1Q9BSK0 173 aa11.11□□□□□ -0.63
CDC42BPB-205ENST00000559245 MGAT4CQ9UBM8 478 aa11.11□□□□□ -0.63
CDC42BPB-205ENST00000559245 TNFRSF18Q9Y5U5 241 aa11.11□□□□□ -0.63
CDC42BPB-205ENST00000559245 PXMP4Q9Y6I8 212 aa11.11□□□□□ -0.63
CDC42BPB-205ENST00000559245 SRRM2Q9UQ35 2752 aaKnown RBP11.1□□□□□ -0.63
CDC42BPB-205ENST00000559245 FAM240BA0A1B0GVZ2 78 aa11.1□□□□□ -0.63
CDC42BPB-205ENST00000559245 NXPH4O95158 308 aa11.1□□□□□ -0.63
CDC42BPB-205ENST00000559245 C18orf15Q96N68 181 aa11.1□□□□□ -0.63
CDC42BPB-205ENST00000559245 NPIPB6E9PJ23 425 aa11.09□□□□□ -0.63
CDC42BPB-205ENST00000559245 AGPAT2O15120 278 aa11.09□□□□□ -0.63
CDC42BPB-205ENST00000559245 IGLC2P0DOY2 106 aa11.09□□□□□ -0.63
CDC42BPB-205ENST00000559245 KRTAP10-1P60331 282 aa11.09□□□□□ -0.63
CDC42BPB-205ENST00000559245 UBE2MP61081 183 aaKnown RBP11.09□□□□□ -0.63
CDC42BPB-205ENST00000559245 MORN5Q5VZ52 161 aa11.09□□□□□ -0.63
CDC42BPB-205ENST00000559245 ZNF546Q86UE3 836 aa11.09□□□□□ -0.63
CDC42BPB-205ENST00000559245 ZNF680Q8NEM1 530 aa11.09□□□□□ -0.63
CDC42BPB-205ENST00000559245 OR10P1Q8NGE3 313 aa11.09□□□□□ -0.63
CDC42BPB-205ENST00000559245 ENKURQ8TC29 256 aa11.09□□□□□ -0.63
CDC42BPB-205ENST00000559245 SAT2Q96F10 170 aaPredicted RBP11.09□□□□□ -0.63
CDC42BPB-205ENST00000559245 C20orf85Q9H1P6 137 aa11.09□□□□□ -0.63
CDC42BPB-205ENST00000559245 GSN-AS1Q9NRJ2 163 aa11.09□□□□□ -0.63
CDC42BPB-205ENST00000559245 FUT9Q9Y231 359 aa11.09□□□□□ -0.63
CDC42BPB-205ENST00000559245 TRGV1A0A0A0MS02 117 aa11.08□□□□□ -0.64
CDC42BPB-205ENST00000559245 C9orf170A2RU37 121 aa11.08□□□□□ -0.64
CDC42BPB-205ENST00000559245 H3BQ15 152 aa11.08□□□□□ -0.64
CDC42BPB-205ENST00000559245 COX7A2P2O60397 106 aa11.08□□□□□ -0.64
CDC42BPB-205ENST00000559245 IFNA5P01569 189 aa11.08□□□□□ -0.64
CDC42BPB-205ENST00000559245 DNAH10OSP0CZ25 163 aa11.08□□□□□ -0.64
CDC42BPB-205ENST00000559245 OPCMLQ14982 345 aa11.08□□□□□ -0.64
CDC42BPB-205ENST00000559245 C4orf46Q504U0 113 aa11.08□□□□□ -0.64
CDC42BPB-205ENST00000559245 C11orf72Q8NBR9 251 aa11.08□□□□□ -0.64
CDC42BPB-205ENST00000559245 TMEM37Q8WXS4 190 aa11.08□□□□□ -0.64
CDC42BPB-205ENST00000559245 NUDT15Q9NV35 164 aa11.08□□□□□ -0.64
CDC42BPB-205ENST00000559245 ICOSQ9Y6W8 199 aa11.08□□□□□ -0.64
CDC42BPB-205ENST00000559245 A0A087WTM6 91 aa11.07□□□□□ -0.64
CDC42BPB-205ENST00000559245 PAX4O43316 350 aa11.07□□□□□ -0.64
CDC42BPB-205ENST00000559245 SLC25A5P05141 298 aaKnown RBP11.07□□□□□ -0.64
CDC42BPB-205ENST00000559245 C10orf113Q5VZT2 155 aa11.07□□□□□ -0.64
CDC42BPB-205ENST00000559245 NFE4Q86UQ8 179 aa11.07□□□□□ -0.64
CDC42BPB-205ENST00000559245 C7orf71A4D174 169 aa11.06□□□□□ -0.64
CDC42BPB-205ENST00000559245 ZNF324O75467 553 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPB-205ENST00000559245 SCGB1D2O95969 90 aa11.06□□□□□ -0.64
CDC42BPB-205ENST00000559245 SMR3BP02814 79 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms