RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 CFDP00746 253 aaPredicted RBP6.65□□□□□ -1.34
SPG11-212ENST00000558790 M6PRP20645 277 aa6.65□□□□□ -1.34
SPG11-212ENST00000558790 RHOBP62745 196 aa6.65□□□□□ -1.34
SPG11-212ENST00000558790 SRPXP78539 464 aa6.65□□□□□ -1.34
SPG11-212ENST00000558790 AKR1C1Q04828 323 aa6.65□□□□□ -1.34
SPG11-212ENST00000558790 C10orf25Q5T742 122 aa6.65□□□□□ -1.34
SPG11-212ENST00000558790 ACOT7LQ6ZUV0 252 aa6.65□□□□□ -1.34
SPG11-212ENST00000558790 TMEM144Q7Z5S9 345 aa6.65□□□□□ -1.34
SPG11-212ENST00000558790 BPIFCQ8NFQ6 507 aa6.65□□□□□ -1.34
SPG11-212ENST00000558790 OR8A1Q8NGG7 326 aa6.65□□□□□ -1.34
SPG11-212ENST00000558790 TMEM263Q8WUH6 116 aaKnown RBP6.65□□□□□ -1.34
SPG11-212ENST00000558790 GNPNAT1Q96EK6 184 aaPredicted RBP6.65□□□□□ -1.34
SPG11-212ENST00000558790 MSRB1Q9NZV6 116 aa6.65□□□□□ -1.34
SPG11-212ENST00000558790 LRP1Q07954 4544 aaKnown RBP6.65□□□□□ -1.34
SPG11-212ENST00000558790 A0A1W2PPQ1 181 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 ANKRD20A5PA0PJZ0 165 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 H3BP45 60 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 ZNF701M0R085 212 aaPredicted RBP6.64□□□□□ -1.35
SPG11-212ENST00000558790 CTDSP2O14595 271 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 ANXA3P12429 323 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 CXCL3P19876 107 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 FUSP35637 526 aaKnown RBP eCLIP6.64□□□□□ -1.35
SPG11-212ENST00000558790 LINC00315P59091 139 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 OR5I1Q13606 314 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 IL18Q14116 193 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 ESRGQ1W209 222 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 Q6ZRN7 208 aaPredicted RBP6.64□□□□□ -1.35
SPG11-212ENST00000558790 LINC00612Q8N6U2 182 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 OR10J6PQ8NGY7 276 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 RXFP4Q8TDU9 374 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 RPL36ALQ969Q0 106 aaKnown RBP6.64□□□□□ -1.35
SPG11-212ENST00000558790 SHANK2-AS3Q9BTD1 123 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 MCUBQ9NWR8 336 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 ZNF586Q9NXT0 402 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 SCP2D1Q9UJQ7 156 aa6.64□□□□□ -1.35
SPG11-212ENST00000558790 MRPS16Q9Y3D3 137 aaKnown RBP6.64□□□□□ -1.35
SPG11-212ENST00000558790 A0A087X0K7 114 aa6.63□□□□□ -1.35
SPG11-212ENST00000558790 A0A0A0MQY5 61 aa6.63□□□□□ -1.35
SPG11-212ENST00000558790 DUXBA0A1W2PPF3 345 aa6.63□□□□□ -1.35
SPG11-212ENST00000558790 CTDSPLO15194 276 aa6.63□□□□□ -1.35
SPG11-212ENST00000558790 CDKN1BP46527 198 aa6.63□□□□□ -1.35
SPG11-212ENST00000558790 ZNF493Q6ZR52 646 aa6.63□□□□□ -1.35
SPG11-212ENST00000558790 PARD6GQ9BYG4 376 aaPredicted RBP6.63□□□□□ -1.35
SPG11-212ENST00000558790 PPP1R14DQ9NXH3 145 aa6.63□□□□□ -1.35
SPG11-212ENST00000558790 HIGD1AQ9Y241 93 aa6.63□□□□□ -1.35
SPG11-212ENST00000558790 H7BYZ3 331 aa6.62□□□□□ -1.35
SPG11-212ENST00000558790 WRBO00258 174 aa6.62□□□□□ -1.35
SPG11-212ENST00000558790 MED6O75586 246 aa6.62□□□□□ -1.35
SPG11-212ENST00000558790 GAGE7O76087 117 aa6.62□□□□□ -1.35
SPG11-212ENST00000558790 LINC00869P0C866 280 aa6.62□□□□□ -1.35
SPG11-212ENST00000558790 GAGE12FP0CL80 117 aa6.62□□□□□ -1.35
SPG11-212ENST00000558790 GAGE12GP0CL81 117 aa6.62□□□□□ -1.35
SPG11-212ENST00000558790 GAGE12IP0CL82 117 aa6.62□□□□□ -1.35
SPG11-212ENST00000558790 SMIM18P0DKX4 95 aa6.62□□□□□ -1.35
SPG11-212ENST00000558790 RPL7P18124 248 aaKnown RBP6.62□□□□□ -1.35
SPG11-212ENST00000558790 S100A7P31151 101 aa6.62□□□□□ -1.35
SPG11-212ENST00000558790 PSG3Q16557 428 aa6.62□□□□□ -1.35
SPG11-212ENST00000558790 Q5VSD8 79 aa6.62□□□□□ -1.35
SPG11-212ENST00000558790 CYP2G1PQ6ZSU1 146 aa6.62□□□□□ -1.35
SPG11-212ENST00000558790 TMED4Q7Z7H5 227 aa6.62□□□□□ -1.35
SPG11-212ENST00000558790 RPUSD4Q96CM3 377 aaKnown RBP6.62□□□□□ -1.35
SPG11-212ENST00000558790 SCGB3A2Q96PL1 93 aa6.62□□□□□ -1.35
SPG11-212ENST00000558790 CIB3Q96Q77 187 aaPredicted RBP6.62□□□□□ -1.35
SPG11-212ENST00000558790 SMCO3A2RU48 225 aa6.61□□□□□ -1.35
SPG11-212ENST00000558790 SYNGR2O43760 224 aa6.61□□□□□ -1.35
SPG11-212ENST00000558790 ADAP1O75689 374 aa6.61□□□□□ -1.35
SPG11-212ENST00000558790 RLN2P04090 185 aa6.61□□□□□ -1.35
SPG11-212ENST00000558790 SLC25A6P12236 298 aa6.61□□□□□ -1.35
SPG11-212ENST00000558790 XGP55808 180 aa6.61□□□□□ -1.35
SPG11-212ENST00000558790 RPP30P78346 268 aaKnown RBP6.61□□□□□ -1.35
SPG11-212ENST00000558790 SPCS2Q15005 226 aa6.61□□□□□ -1.35
SPG11-212ENST00000558790 SPANXN5Q5MJ07 72 aa6.61□□□□□ -1.35
SPG11-212ENST00000558790 GFI1BQ5VTD9 330 aa6.61□□□□□ -1.35
SPG11-212ENST00000558790 LYPD1Q8N2G4 141 aa6.61□□□□□ -1.35
SPG11-212ENST00000558790 LRTM2Q8N967 370 aa6.61□□□□□ -1.35
SPG11-212ENST00000558790 DIRAS2Q96HU8 199 aa6.61□□□□□ -1.35
SPG11-212ENST00000558790 FAT3Q8TDW7 4589 aa6.6□□□□□ -1.35
SPG11-212ENST00000558790 A0A096LPF7 62 aa6.6□□□□□ -1.35
SPG11-212ENST00000558790 PIGBOS1A0A0B4J2F0 54 aa6.6□□□□□ -1.35
SPG11-212ENST00000558790 H3BNG1 76 aa6.6□□□□□ -1.35
SPG11-212ENST00000558790 MRPS12O15235 138 aaKnown RBP6.6□□□□□ -1.35
SPG11-212ENST00000558790 HYPMO75409 117 aa6.6□□□□□ -1.35
SPG11-212ENST00000558790 IL5P05113 134 aa6.6□□□□□ -1.35
SPG11-212ENST00000558790 OR5G3P0C626 314 aa6.6□□□□□ -1.35
SPG11-212ENST00000558790 PLP1P60201 277 aa6.6□□□□□ -1.35
SPG11-212ENST00000558790 PIK3CD-AS1Q5SR53 167 aa6.6□□□□□ -1.35
SPG11-212ENST00000558790 PXDC1Q5TGL8 231 aa6.6□□□□□ -1.35
SPG11-212ENST00000558790 NRACQ8N912 160 aa6.6□□□□□ -1.35
SPG11-212ENST00000558790 LRRC20Q8TCA0 184 aa6.6□□□□□ -1.35
SPG11-212ENST00000558790 C20orf144Q9BQM9 153 aa6.6□□□□□ -1.35
SPG11-212ENST00000558790 STRAPQ9Y3F4 350 aaKnown RBP6.6□□□□□ -1.35
SPG11-212ENST00000558790 PMS2P5A8MQ11 134 aa6.59□□□□□ -1.35
SPG11-212ENST00000558790 SNURFLB1AK76 121 aa6.59□□□□□ -1.35
SPG11-212ENST00000558790 PRAC2D3DTV9 90 aa6.59□□□□□ -1.35
SPG11-212ENST00000558790 SLC17A3O00476 420 aa6.59□□□□□ -1.35
SPG11-212ENST00000558790 CCNKO75909 580 aa6.59□□□□□ -1.35
SPG11-212ENST00000558790 SNRPCP09234 159 aaKnown RBP6.59□□□□□ -1.35
SPG11-212ENST00000558790 DNAH10OSP0CZ25 163 aa6.59□□□□□ -1.35
SPG11-212ENST00000558790 CXCL2P19875 107 aa6.59□□□□□ -1.35
SPG11-212ENST00000558790 ERVFC1-1P60608 527 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms