RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 H3BMM0 161 aa12.83□□□□□ -0.36
TPM1-214ENST00000558544 APOC4P55056 127 aa12.83□□□□□ -0.36
TPM1-214ENST00000558544 PSG9Q00887 426 aa12.83□□□□□ -0.36
TPM1-214ENST00000558544 EBLN2Q6P2I7 272 aa12.83□□□□□ -0.36
TPM1-214ENST00000558544 EXOC3-AS1Q8N2X6 119 aa12.83□□□□□ -0.36
TPM1-214ENST00000558544 IGKV3-20P01619 116 aa12.82□□□□□ -0.36
TPM1-214ENST00000558544 ZNF705DP0CH99 300 aaPredicted RBP12.82□□□□□ -0.36
TPM1-214ENST00000558544 ZNF705BP0CI00 300 aaPredicted RBP12.82□□□□□ -0.36
TPM1-214ENST00000558544 FHITP49789 147 aa12.82□□□□□ -0.36
TPM1-214ENST00000558544 SULT1A2P50226 295 aa12.82□□□□□ -0.36
TPM1-214ENST00000558544 EIF5AL1Q6IS14 154 aaKnown RBP12.82□□□□□ -0.36
TPM1-214ENST00000558544 OR4B1Q8NGF8 309 aa12.82□□□□□ -0.36
TPM1-214ENST00000558544 RPUSD4Q96CM3 377 aaKnown RBP12.82□□□□□ -0.36
TPM1-214ENST00000558544 AAMDCQ9H7C9 122 aa12.82□□□□□ -0.36
TPM1-214ENST00000558544 CLEC5AQ9NY25 188 aa12.82□□□□□ -0.36
TPM1-214ENST00000558544 NBEAL2Q6ZNJ1 2754 aa12.82□□□□□ -0.36
TPM1-214ENST00000558544 KIR2DL5BA0A0G2JN68 375 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 KIR2DL5BA0A0G2JPC4 375 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 UMAD1C9J7I0 102 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 M0R3E3 92 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 CXorf1O96002 111 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 GCHFRP30047 84 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 ICAM4Q14773 271 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 IQCF2Q8IXL9 164 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 KIR2DL5AQ8N109 375 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 KIR2DL5BQ8NHK3 375 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 FAM213BQ8TBF2 198 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 CSTL1Q9H114 145 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 MAP1LC3B2A6NCE7 125 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 PRAC2D3DTV9 90 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 FGF8P55075 233 aaPredicted RBP12.81□□□□□ -0.36
TPM1-214ENST00000558544 RAB14P61106 215 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 RANP62826 216 aaKnown RBP12.81□□□□□ -0.36
TPM1-214ENST00000558544 HIST1H1AQ02539 215 aaPredicted RBP12.81□□□□□ -0.36
TPM1-214ENST00000558544 OR8A1Q8NGG7 326 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 TM2D3Q9BRN9 247 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 MAP1LC3BQ9GZQ8 125 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 Q9H3A6 140 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 RETNQ9HD89 108 aa12.81□□□□□ -0.36
TPM1-214ENST00000558544 TENM3Q9P273 2699 aa12.8□□□□□ -0.36
TPM1-214ENST00000558544 CA1P00915 261 aaPredicted RBP12.8□□□□□ -0.36
TPM1-214ENST00000558544 CNN1P51911 297 aaKnown RBP12.8□□□□□ -0.36
TPM1-214ENST00000558544 SLC7A5P1Q8MH63 180 aa12.8□□□□□ -0.36
TPM1-214ENST00000558544 PRELID1Q9Y255 219 aa12.8□□□□□ -0.36
TPM1-214ENST00000558544 LINC00862A6NCI5 91 aa12.79□□□□□ -0.36
TPM1-214ENST00000558544 UBE2CO00762 179 aa12.79□□□□□ -0.36
TPM1-214ENST00000558544 DUSP14O95147 198 aaKnown RBP12.79□□□□□ -0.36
TPM1-214ENST00000558544 NHLRC4P0CG21 123 aaPredicted RBP12.79□□□□□ -0.36
TPM1-214ENST00000558544 DEFB135Q30KP9 77 aa12.79□□□□□ -0.36
TPM1-214ENST00000558544 MORN3Q6PF18 240 aaPredicted RBP12.79□□□□□ -0.36
TPM1-214ENST00000558544 MRPL53Q96EL3 112 aaKnown RBP12.79□□□□□ -0.36
TPM1-214ENST00000558544 SPATA25Q9BR10 227 aa12.79□□□□□ -0.36
TPM1-214ENST00000558544 TMPRSS5Q9H3S3 457 aa12.79□□□□□ -0.36
TPM1-214ENST00000558544 ZMAT4Q9H898 229 aa12.79□□□□□ -0.36
TPM1-214ENST00000558544 TMEM167BQ9NRX6 74 aa12.79□□□□□ -0.36
TPM1-214ENST00000558544 FXYD7P58549 80 aa12.78□□□□□ -0.36
TPM1-214ENST00000558544 NDUFA5Q16718 116 aa12.78□□□□□ -0.36
TPM1-214ENST00000558544 DPPA3Q6W0C5 159 aa12.78□□□□□ -0.36
TPM1-214ENST00000558544 LYPD1Q8N2G4 141 aa12.78□□□□□ -0.36
TPM1-214ENST00000558544 SUN5Q8TC36 379 aa12.78□□□□□ -0.36
TPM1-214ENST00000558544 ZNF705EA8MWA4 302 aaPredicted RBP12.77□□□□□ -0.37
TPM1-214ENST00000558544 GIG44P09565 113 aaPredicted RBP12.77□□□□□ -0.37
TPM1-214ENST00000558544 OR10J6PQ8NGY7 276 aa12.77□□□□□ -0.37
TPM1-214ENST00000558544 SLC35B3Q9H1N7 401 aa12.77□□□□□ -0.37
TPM1-214ENST00000558544 OTORQ9NRC9 128 aa12.77□□□□□ -0.37
TPM1-214ENST00000558544 A0A1B0GV50 99 aa12.76□□□□□ -0.37
TPM1-214ENST00000558544 A8MTW9 85 aa12.76□□□□□ -0.37
TPM1-214ENST00000558544 NUTF2P61970 127 aaKnown RBP12.76□□□□□ -0.37
TPM1-214ENST00000558544 AMTNQ6UX39 209 aa12.76□□□□□ -0.37
TPM1-214ENST00000558544 Q6ZWC4 215 aa12.76□□□□□ -0.37
TPM1-214ENST00000558544 SFT2D1Q8WV19 159 aa12.76□□□□□ -0.37
TPM1-214ENST00000558544 CLUHP3Q96NS8 147 aa12.76□□□□□ -0.37
TPM1-214ENST00000558544 IGKV2-40A0A087WW87 121 aaPredicted RBP12.75□□□□□ -0.37
TPM1-214ENST00000558544 PGPA6NDG6 321 aa12.75□□□□□ -0.37
TPM1-214ENST00000558544 IGKV2D-40P01614 121 aaPredicted RBP12.75□□□□□ -0.37
TPM1-214ENST00000558544 RAB5CP51148 216 aa12.75□□□□□ -0.37
TPM1-214ENST00000558544 MBD3L1Q8WWY6 194 aa12.75□□□□□ -0.37
TPM1-214ENST00000558544 XCL2Q9UBD3 114 aa12.75□□□□□ -0.37
TPM1-214ENST00000558544 TEX46H3BTG2 121 aa12.74□□□□□ -0.37
TPM1-214ENST00000558544 H2AFB1P0C5Y9 115 aa12.74□□□□□ -0.37
TPM1-214ENST00000558544 CSN1S1P47710 185 aa12.74□□□□□ -0.37
TPM1-214ENST00000558544 UBE2G2P60604 165 aa12.74□□□□□ -0.37
TPM1-214ENST00000558544 RCHY1Q96PM5 261 aa12.74□□□□□ -0.37
TPM1-214ENST00000558544 OVOL2Q9BRP0 275 aa12.74□□□□□ -0.37
TPM1-214ENST00000558544 PPP1R14DQ9NXH3 145 aa12.74□□□□□ -0.37
TPM1-214ENST00000558544 RPH3ALQ9UNE2 315 aa12.74□□□□□ -0.37
TPM1-214ENST00000558544 NPIPB6E9PJ23 425 aa12.73□□□□□ -0.37
TPM1-214ENST00000558544 SPRY2O43597 315 aa12.73□□□□□ -0.37
TPM1-214ENST00000558544 BLOC1S1P78537 153 aa12.73□□□□□ -0.37
TPM1-214ENST00000558544 ERCC8Q13216 396 aa12.73□□□□□ -0.37
TPM1-214ENST00000558544 SPINK13Q1W4C9 94 aa12.73□□□□□ -0.37
TPM1-214ENST00000558544 CMTM2Q8TAZ6 248 aa12.73□□□□□ -0.37
TPM1-214ENST00000558544 RNF183Q96D59 192 aa12.73□□□□□ -0.37
TPM1-214ENST00000558544 C1QTNF4Q9BXJ3 329 aa12.73□□□□□ -0.37
TPM1-214ENST00000558544 MED9Q9NWA0 146 aa12.73□□□□□ -0.37
TPM1-214ENST00000558544 YTHDF2Q9Y5A9 579 aaKnown RBP12.73□□□□□ -0.37
TPM1-214ENST00000558544 U3KQK5 164 aa12.73□□□□□ -0.37
TPM1-214ENST00000558544 GGTLC3B5MD39 225 aa12.72□□□□□ -0.37
TPM1-214ENST00000558544 M0R2Z0 102 aa12.72□□□□□ -0.37
TPM1-214ENST00000558544 ATP6V1G1O75348 118 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms