RNA–Protein interactions for RNA: ENST00000558518.5

LDLR-208, Transcript of low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDLR, Length 3,617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-208ENST00000558518 SCGB2A2Q13296 93 aa8.99□□□□□ -0.97
LDLR-208ENST00000558518 SH2D6Q7Z4S9 175 aa8.99□□□□□ -0.97
LDLR-208ENST00000558518 C1orf162Q8NEQ5 155 aaPredicted RBP8.99□□□□□ -0.97
LDLR-208ENST00000558518 SCNM1Q9BWG6 230 aa8.99□□□□□ -0.97
LDLR-208ENST00000558518 CRXO43186 299 aaPredicted RBP8.98□□□□□ -0.97
LDLR-208ENST00000558518 BSPH1Q075Z2 132 aa8.98□□□□□ -0.97
LDLR-208ENST00000558518 PPP1R27Q86WC6 154 aa8.98□□□□□ -0.97
LDLR-208ENST00000558518 HIF1ANQ9NWT6 349 aa8.98□□□□□ -0.97
LDLR-208ENST00000558518 HAX1O00165 279 aa8.98□□□□□ -0.97
LDLR-208ENST00000558518 HBDP02042 147 aa8.98□□□□□ -0.97
LDLR-208ENST00000558518 MRPL51Q4U2R6 128 aaKnown RBP8.98□□□□□ -0.97
LDLR-208ENST00000558518 PRSS33Q8NF86 280 aa8.98□□□□□ -0.97
LDLR-208ENST00000558518 K7EP34 96 aa8.98□□□□□ -0.97
LDLR-208ENST00000558518 TM4SF5O14894 197 aa8.98□□□□□ -0.97
LDLR-208ENST00000558518 NDUFA3O95167 84 aa8.98□□□□□ -0.97
LDLR-208ENST00000558518 CRIP1P50238 77 aa8.98□□□□□ -0.97
LDLR-208ENST00000558518 CR1LQ2VPA4 569 aa8.98□□□□□ -0.97
LDLR-208ENST00000558518 SOX21Q9Y651 276 aaPredicted RBP8.98□□□□□ -0.97
LDLR-208ENST00000558518 IGKV2D-26A0A0A0MRZ7 120 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 SH2D1AO60880 128 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 IGLV2-23P01705 113 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 MYCNOSP40205 109 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 ETDBQ3ZM63 59 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 CTSZQ9UBR2 303 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 KLF12Q9Y4X4 402 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 TRAV26-2A0A0B4J265 109 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 CDX4O14627 284 aaPredicted RBP8.97□□□□□ -0.97
LDLR-208ENST00000558518 HSD52Q0P140 79 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 AKAP13Q12802 2813 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 A0A1W2PPM0 123 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 C17orf100A8MU93 164 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 FSTL3O95633 263 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 ADAMTSL5Q6ZMM2 481 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 THAP8Q8NA92 274 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 RNF125Q96EQ8 232 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 TRGV9Q99603 122 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 SIGLEC9Q9Y336 463 aa8.97□□□□□ -0.97
LDLR-208ENST00000558518 IGKV3-7A0A075B6H7 116 aa8.96□□□□□ -0.97
LDLR-208ENST00000558518 H3BMG7 143 aa8.96□□□□□ -0.97
LDLR-208ENST00000558518 ERCC8Q13216 396 aa8.96□□□□□ -0.97
LDLR-208ENST00000558518 ZC2HC1BQ5TFG8 222 aa8.96□□□□□ -0.97
LDLR-208ENST00000558518 TSSC4Q9Y5U2 329 aaPredicted RBP8.96□□□□□ -0.97
LDLR-208ENST00000558518 COL12A1Q99715 3063 aa8.96□□□□□ -0.98
LDLR-208ENST00000558518 H3BRM9 83 aa8.96□□□□□ -0.98
LDLR-208ENST00000558518 FCN3O75636 299 aa8.96□□□□□ -0.98
LDLR-208ENST00000558518 IGHG3P01860 377 aa8.96□□□□□ -0.98
LDLR-208ENST00000558518 AZU1P20160 251 aa8.96□□□□□ -0.98
LDLR-208ENST00000558518 ATP5IP56385 69 aaPredicted RBP8.96□□□□□ -0.98
LDLR-208ENST00000558518 ARPC1AQ92747 370 aa8.96□□□□□ -0.98
LDLR-208ENST00000558518 ZNF492Q9P255 531 aa8.96□□□□□ -0.98
LDLR-208ENST00000558518 WFDC2Q14508 124 aa8.95□□□□□ -0.98
LDLR-208ENST00000558518 ZNF785A8K8V0 405 aa8.95□□□□□ -0.98
LDLR-208ENST00000558518 K7EM74 188 aa8.95□□□□□ -0.98
LDLR-208ENST00000558518 NDUFS7O75251 213 aa8.95□□□□□ -0.98
LDLR-208ENST00000558518 IGLV2-11P01706 119 aa8.95□□□□□ -0.98
LDLR-208ENST00000558518 IGHV1-8P0DP01 117 aa8.95□□□□□ -0.98
LDLR-208ENST00000558518 MC5RP33032 325 aa8.95□□□□□ -0.98
LDLR-208ENST00000558518 HIST1H4GQ99525 98 aa8.95□□□□□ -0.98
LDLR-208ENST00000558518 TRBV19A0A075B6N1 114 aa8.95□□□□□ -0.98
LDLR-208ENST00000558518 TRAV40A0A0B4J280 105 aa8.95□□□□□ -0.98
LDLR-208ENST00000558518 IGKV1-17P01599 117 aa8.95□□□□□ -0.98
LDLR-208ENST00000558518 VGLL1Q99990 258 aa8.95□□□□□ -0.98
LDLR-208ENST00000558518 A0A096LNJ9 63 aa8.94□□□□□ -0.98
LDLR-208ENST00000558518 ADIPOQQ15848 244 aa8.94□□□□□ -0.98
LDLR-208ENST00000558518 NPFFR1Q9GZQ6 430 aa8.94□□□□□ -0.98
LDLR-208ENST00000558518 FAM215AQ9Y5M1 114 aa8.94□□□□□ -0.98
LDLR-208ENST00000558518 IGF2RP11717 2491 aa8.94□□□□□ -0.98
LDLR-208ENST00000558518 G3V4G9 280 aa8.94□□□□□ -0.98
LDLR-208ENST00000558518 LGALS7P47929 136 aa8.94□□□□□ -0.98
LDLR-208ENST00000558518 FAM104BQ5XKR9 115 aa8.94□□□□□ -0.98
LDLR-208ENST00000558518 RNF182Q8N6D2 247 aa8.94□□□□□ -0.98
LDLR-208ENST00000558518 CHAC1Q9BUX1 264 aa8.94□□□□□ -0.98
LDLR-208ENST00000558518 COL25A1Q9BXS0 654 aaPredicted RBP8.94□□□□□ -0.98
LDLR-208ENST00000558518 GFRA4Q9GZZ7 299 aa8.94□□□□□ -0.98
LDLR-208ENST00000558518 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.94□□□□□ -0.98
LDLR-208ENST00000558518 EGR2P11161 476 aaPredicted RBP8.94□□□□□ -0.98
LDLR-208ENST00000558518 KLRD1Q13241 179 aa8.94□□□□□ -0.98
LDLR-208ENST00000558518 CT83Q5H943 113 aa8.94□□□□□ -0.98
LDLR-208ENST00000558518 PIP4P2Q8N4L2 257 aa8.94□□□□□ -0.98
LDLR-208ENST00000558518 TMEM158Q8WZ71 300 aa8.94□□□□□ -0.98
LDLR-208ENST00000558518 C2CD3Q4AC94 2353 aa8.93□□□□□ -0.98
LDLR-208ENST00000558518 IGLV3-9A0A075B6K5 115 aa8.93□□□□□ -0.98
LDLR-208ENST00000558518 IGHV1-3A0A0C4DH29 117 aa8.93□□□□□ -0.98
LDLR-208ENST00000558518 TIMM23O14925 209 aa8.93□□□□□ -0.98
LDLR-208ENST00000558518 LOXP28300 417 aaPredicted RBP8.93□□□□□ -0.98
LDLR-208ENST00000558518 MAP1LC3AQ9H492 121 aa8.93□□□□□ -0.98
LDLR-208ENST00000558518 LOC107984156A0A0G2JMH3 177 aa8.93□□□□□ -0.98
LDLR-208ENST00000558518 NPIPB6E9PJ23 425 aa8.93□□□□□ -0.98
LDLR-208ENST00000558518 TMEM178BH3BS89 294 aa8.93□□□□□ -0.98
LDLR-208ENST00000558518 ARL3P36405 182 aa8.93□□□□□ -0.98
LDLR-208ENST00000558518 ARL17AQ8IVW1 177 aa8.93□□□□□ -0.98
LDLR-208ENST00000558518 DEFB123Q8N688 67 aa8.93□□□□□ -0.98
LDLR-208ENST00000558518 SPOCK3Q9BQ16 436 aa8.93□□□□□ -0.98
LDLR-208ENST00000558518 COLQQ9Y215 455 aaPredicted RBP8.93□□□□□ -0.98
LDLR-208ENST00000558518 FGF6P10767 208 aa8.93□□□□□ -0.98
LDLR-208ENST00000558518 EFNA4P52798 201 aa8.93□□□□□ -0.98
LDLR-208ENST00000558518 CSPG4Q6UVK1 2322 aa8.93□□□□□ -0.98
LDLR-208ENST00000558518 C16orf97H3BN30 126 aa8.92□□□□□ -0.98
LDLR-208ENST00000558518 ATP5G2Q06055 141 aa8.92□□□□□ -0.98
LDLR-208ENST00000558518 SIGLEC15Q6ZMC9 328 aa8.92□□□□□ -0.98
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