RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 HMGB3O15347 200 aaKnown RBP9.09□□□□□ -0.95
LRRC28-206ENST00000558471 MBP02144 154 aa9.09□□□□□ -0.95
LRRC28-206ENST00000558471 HIST1H1AQ02539 215 aaPredicted RBP9.09□□□□□ -0.95
LRRC28-206ENST00000558471 KHDC3LQ587J8 217 aa9.09□□□□□ -0.95
LRRC28-206ENST00000558471 EXOC3-AS1Q8N2X6 119 aa9.09□□□□□ -0.95
LRRC28-206ENST00000558471 ARPC5LQ9BPX5 153 aa9.09□□□□□ -0.95
LRRC28-206ENST00000558471 C1QTNF4Q9BXJ3 329 aa9.09□□□□□ -0.95
LRRC28-206ENST00000558471 M0R3E3 92 aa9.08□□□□□ -0.96
LRRC28-206ENST00000558471 CDC34P49427 236 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-206ENST00000558471 ICAM4Q14773 271 aa9.08□□□□□ -0.96
LRRC28-206ENST00000558471 RAB24Q969Q5 203 aa9.08□□□□□ -0.96
LRRC28-206ENST00000558471 A0A0J9YWU9 116 aa9.07□□□□□ -0.96
LRRC28-206ENST00000558471 STAG3L2P0CL84 134 aa9.07□□□□□ -0.96
LRRC28-206ENST00000558471 STAG3L3P0CL85 134 aa9.07□□□□□ -0.96
LRRC28-206ENST00000558471 RANP62826 216 aaKnown RBP9.07□□□□□ -0.96
LRRC28-206ENST00000558471 UBE2L3P68036 154 aaKnown RBP9.07□□□□□ -0.96
LRRC28-206ENST00000558471 PQLC2Q6ZP29 291 aa9.07□□□□□ -0.96
LRRC28-206ENST00000558471 TMUB2Q71RG4 321 aa9.07□□□□□ -0.96
LRRC28-206ENST00000558471 AKAP14Q86UN6 197 aa9.07□□□□□ -0.96
LRRC28-206ENST00000558471 MRPL53Q96EL3 112 aaKnown RBP9.07□□□□□ -0.96
LRRC28-206ENST00000558471 PHYHIPLQ96FC7 376 aa9.07□□□□□ -0.96
LRRC28-206ENST00000558471 ACTR3CQ9C0K3 210 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-206ENST00000558471 AAMDCQ9H7C9 122 aa9.07□□□□□ -0.96
LRRC28-206ENST00000558471 PRELID1Q9Y255 219 aa9.07□□□□□ -0.96
LRRC28-206ENST00000558471 X6R8D5 127 aa9.07□□□□□ -0.96
LRRC28-206ENST00000558471 KANTRA0A1W2PQU2 76 aa9.06□□□□□ -0.96
LRRC28-206ENST00000558471 ZNF705EA8MWA4 302 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-206ENST00000558471 M0R2Z0 102 aa9.06□□□□□ -0.96
LRRC28-206ENST00000558471 BCL2L11O43521 198 aa9.06□□□□□ -0.96
LRRC28-206ENST00000558471 C1QBP02746 253 aa9.06□□□□□ -0.96
LRRC28-206ENST00000558471 CD300CQ08708 224 aa9.06□□□□□ -0.96
LRRC28-206ENST00000558471 SPINK13Q1W4C9 94 aa9.06□□□□□ -0.96
LRRC28-206ENST00000558471 LGALSLQ3ZCW2 172 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-206ENST00000558471 SSX7Q7RTT5 188 aa9.06□□□□□ -0.96
LRRC28-206ENST00000558471 OR10J6PQ8NGY7 276 aa9.06□□□□□ -0.96
LRRC28-206ENST00000558471 ZNF471Q9BX82 626 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-206ENST00000558471 CRXO43186 299 aaPredicted RBP9.05□□□□□ -0.96
LRRC28-206ENST00000558471 ARL14EPLP0DKL9 152 aa9.05□□□□□ -0.96
LRRC28-206ENST00000558471 ZNF726P1Q15940 193 aa9.05□□□□□ -0.96
LRRC28-206ENST00000558471 AKR1C8PQ5T2L2 129 aa9.05□□□□□ -0.96
LRRC28-206ENST00000558471 ZNF705AQ6ZN79 300 aaPredicted RBP9.05□□□□□ -0.96
LRRC28-206ENST00000558471 C1orf158Q8N1D5 194 aa9.05□□□□□ -0.96
LRRC28-206ENST00000558471 LYPD1Q8N2G4 141 aa9.05□□□□□ -0.96
LRRC28-206ENST00000558471 MUC7Q8TAX7 377 aa9.05□□□□□ -0.96
LRRC28-206ENST00000558471 Q9H3A6 140 aa9.05□□□□□ -0.96
LRRC28-206ENST00000558471 PPP1R14DQ9NXH3 145 aa9.05□□□□□ -0.96
LRRC28-206ENST00000558471 PLA2G2EQ9NZK7 142 aa9.05□□□□□ -0.96
LRRC28-206ENST00000558471 TRAV12-2A0A075B6T6 113 aa9.04□□□□□ -0.96
LRRC28-206ENST00000558471 NPIPB6E9PJ23 425 aa9.04□□□□□ -0.96
LRRC28-206ENST00000558471 BOLA2-SMG1P6H3BVE0 249 aa9.04□□□□□ -0.96
LRRC28-206ENST00000558471 DEFB4AO15263 64 aa9.04□□□□□ -0.96
LRRC28-206ENST00000558471 PFDN1O60925 122 aa9.04□□□□□ -0.96
LRRC28-206ENST00000558471 AMBPP02760 352 aa9.04□□□□□ -0.96
LRRC28-206ENST00000558471 CT45A10P0DMU9 189 aa9.04□□□□□ -0.96
LRRC28-206ENST00000558471 GCHFRP30047 84 aa9.04□□□□□ -0.96
LRRC28-206ENST00000558471 ERCC8Q13216 396 aa9.04□□□□□ -0.96
LRRC28-206ENST00000558471 Q8NAQ8 132 aa9.04□□□□□ -0.96
LRRC28-206ENST00000558471 HYLS1Q96M11 299 aa9.04□□□□□ -0.96
LRRC28-206ENST00000558471 IGF2BP2-AS1Q96M15 143 aa9.04□□□□□ -0.96
LRRC28-206ENST00000558471 IGHV3OR16-12A0A075B7B8 117 aa9.03□□□□□ -0.96
LRRC28-206ENST00000558471 IGHV4-28A0A0C4DH34 117 aa9.03□□□□□ -0.96
LRRC28-206ENST00000558471 CTXND1A0A1B0GTU2 59 aa9.03□□□□□ -0.96
LRRC28-206ENST00000558471 CXorf1O96002 111 aa9.03□□□□□ -0.96
LRRC28-206ENST00000558471 SEC11BP0C7V7 166 aa9.03□□□□□ -0.96
LRRC28-206ENST00000558471 RBMY1A1P0DJD3 496 aaKnown RBP9.03□□□□□ -0.96
LRRC28-206ENST00000558471 RBMY1CP0DJD4 496 aa9.03□□□□□ -0.96
LRRC28-206ENST00000558471 MIFP14174 115 aa9.03□□□□□ -0.96
LRRC28-206ENST00000558471 RBMY1FQ15415 496 aaKnown RBP9.03□□□□□ -0.96
LRRC28-206ENST00000558471 BAP18Q8IXM2 172 aa9.03□□□□□ -0.96
LRRC28-206ENST00000558471 SUN5Q8TC36 379 aa9.03□□□□□ -0.96
LRRC28-206ENST00000558471 AGPAT4-IT1Q9H0P7 198 aa9.03□□□□□ -0.96
LRRC28-206ENST00000558471 IGKV2-40A0A087WW87 121 aaPredicted RBP9.02□□□□□ -0.97
LRRC28-206ENST00000558471 PGPA6NDG6 321 aa9.02□□□□□ -0.97
LRRC28-206ENST00000558471 C3orf84H3BNL1 204 aa9.02□□□□□ -0.97
LRRC28-206ENST00000558471 IGKV2D-40P01614 121 aaPredicted RBP9.02□□□□□ -0.97
LRRC28-206ENST00000558471 CDKN1BP46527 198 aa9.02□□□□□ -0.97
LRRC28-206ENST00000558471 EIF5AP63241 154 aaKnown RBP9.02□□□□□ -0.97
LRRC28-206ENST00000558471 KIR3DS1Q14943 382 aa9.02□□□□□ -0.97
LRRC28-206ENST00000558471 C9orf47Q6ZRZ4 202 aa9.02□□□□□ -0.97
LRRC28-206ENST00000558471 IL17DQ8TAD2 202 aa9.02□□□□□ -0.97
LRRC28-206ENST00000558471 LINC00477Q96M19 166 aa9.02□□□□□ -0.97
LRRC28-206ENST00000558471 NEU1Q99519 415 aa9.02□□□□□ -0.97
LRRC28-206ENST00000558471 VGLL1Q99990 258 aa9.02□□□□□ -0.97
LRRC28-206ENST00000558471 C11orf68Q9H3H3 251 aaKnown RBP9.02□□□□□ -0.97
LRRC28-206ENST00000558471 OTORQ9NRC9 128 aa9.02□□□□□ -0.97
LRRC28-206ENST00000558471 GOLT1BQ9Y3E0 138 aa9.02□□□□□ -0.97
LRRC28-206ENST00000558471 SMIM9A6NGZ8 99 aa9.01□□□□□ -0.97
LRRC28-206ENST00000558471 DIRC3C9JPN6 131 aa9.01□□□□□ -0.97
LRRC28-206ENST00000558471 INSP01308 110 aa9.01□□□□□ -0.97
LRRC28-206ENST00000558471 TPT1P13693 172 aaKnown RBP9.01□□□□□ -0.97
LRRC28-206ENST00000558471 CSN1S1P47710 185 aa9.01□□□□□ -0.97
LRRC28-206ENST00000558471 FHITP49789 147 aa9.01□□□□□ -0.97
LRRC28-206ENST00000558471 ZFAND6Q6FIF0 208 aa9.01□□□□□ -0.97
LRRC28-206ENST00000558471 STOML3Q8TAV4 291 aa9.01□□□□□ -0.97
LRRC28-206ENST00000558471 RXFP4Q8TDU9 374 aa9.01□□□□□ -0.97
LRRC28-206ENST00000558471 ODF3Q96PU9 254 aa9.01□□□□□ -0.97
LRRC28-206ENST00000558471 TMPRSS5Q9H3S3 457 aa9.01□□□□□ -0.97
LRRC28-206ENST00000558471 TMEM167BQ9NRX6 74 aa9.01□□□□□ -0.97
LRRC28-206ENST00000558471 DNAH7Q8WXX0 4024 aa9.01□□□□□ -0.97
LRRC28-206ENST00000558471 J3KRW8 73 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms