RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 PCP2Q8IVA1 136 aa9.52□□□□□ -0.89
CSPG4P12-201ENST00000558282 C1orf210Q8IVY1 113 aa9.51□□□□□ -0.89
CSPG4P12-201ENST00000558282 DOCK3Q8IZD9 2030 aa9.51□□□□□ -0.89
CSPG4P12-201ENST00000558282 TMEM14BQ9NUH8 114 aa9.51□□□□□ -0.89
CSPG4P12-201ENST00000558282 RBX1P62877 108 aa9.51□□□□□ -0.89
CSPG4P12-201ENST00000558282 CEP350Q5VT06 3117 aa9.51□□□□□ -0.89
CSPG4P12-201ENST00000558282 SRRM4A7MD48 611 aaKnown RBP9.51□□□□□ -0.89
CSPG4P12-201ENST00000558282 CELA3BP08861 270 aa9.51□□□□□ -0.89
CSPG4P12-201ENST00000558282 FHL1Q13642 323 aa9.51□□□□□ -0.89
CSPG4P12-201ENST00000558282 FLVCR1-AS1Q8TAF5 88 aa9.51□□□□□ -0.89
CSPG4P12-201ENST00000558282 OOSP1A8MZH6 123 aa9.51□□□□□ -0.89
CSPG4P12-201ENST00000558282 NUPR1O60356 82 aa9.51□□□□□ -0.89
CSPG4P12-201ENST00000558282 CNOT1A5YKK6 2376 aaKnown RBP9.51□□□□□ -0.89
CSPG4P12-201ENST00000558282 TRBV19A0A075B6N1 114 aa9.5□□□□□ -0.89
CSPG4P12-201ENST00000558282 F8WEM9 126 aa9.5□□□□□ -0.89
CSPG4P12-201ENST00000558282 K7EN84 100 aa9.5□□□□□ -0.89
CSPG4P12-201ENST00000558282 CCL21O00585 134 aa9.5□□□□□ -0.89
CSPG4P12-201ENST00000558282 ZNF71Q9NQZ8 489 aaPredicted RBP9.5□□□□□ -0.89
CSPG4P12-201ENST00000558282 SCN10AQ9Y5Y9 1956 aa9.5□□□□□ -0.89
CSPG4P12-201ENST00000558282 IGKV1-6A0A0C4DH72 117 aa9.5□□□□□ -0.89
CSPG4P12-201ENST00000558282 DEFB124Q8NES8 71 aa9.5□□□□□ -0.89
CSPG4P12-201ENST00000558282 TRGV4A0A0C4DH28 118 aa9.5□□□□□ -0.89
CSPG4P12-201ENST00000558282 Q8NFD4 153 aa9.5□□□□□ -0.89
CSPG4P12-201ENST00000558282 ZDBF2Q9HCK1 2354 aa9.5□□□□□ -0.89
CSPG4P12-201ENST00000558282 TIMM23O14925 209 aa9.5□□□□□ -0.89
CSPG4P12-201ENST00000558282 TDRD15B5MCY1 1934 aaKnown RBP9.49□□□□□ -0.89
CSPG4P12-201ENST00000558282 A0A1B0GX51 115 aa9.49□□□□□ -0.89
CSPG4P12-201ENST00000558282 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.49□□□□□ -0.89
CSPG4P12-201ENST00000558282 FOXG1P55316 489 aaPredicted RBP9.49□□□□□ -0.89
CSPG4P12-201ENST00000558282 DTX2Q86UW9 622 aa9.49□□□□□ -0.89
CSPG4P12-201ENST00000558282 ZSWIM8A7E2V4 1837 aa9.49□□□□□ -0.89
CSPG4P12-201ENST00000558282 ROS1P08922 2347 aa9.49□□□□□ -0.89
CSPG4P12-201ENST00000558282 I3L3M4 83 aa9.49□□□□□ -0.89
CSPG4P12-201ENST00000558282 NDUFB8O95169 186 aa9.49□□□□□ -0.89
CSPG4P12-201ENST00000558282 RNF183Q96D59 192 aa9.49□□□□□ -0.89
CSPG4P12-201ENST00000558282 BRCA1P38398 1863 aaKnown RBP9.49□□□□□ -0.89
CSPG4P12-201ENST00000558282 CACNA1GO43497 2377 aa9.49□□□□□ -0.89
CSPG4P12-201ENST00000558282 TRBV7-1A0A0A6YYK4 115 aa9.49□□□□□ -0.89
CSPG4P12-201ENST00000558282 SMRP1Q8NCR6 262 aa9.49□□□□□ -0.89
CSPG4P12-201ENST00000558282 C1orf159Q96HA4 380 aa9.49□□□□□ -0.89
CSPG4P12-201ENST00000558282 SAP25Q8TEE9 199 aa9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 EFNA2O43921 213 aa9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 BAALC-AS2P0C853 105 aa9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 CD24P25063 80 aa9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 CR1LQ2VPA4 569 aa9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 LINC01620Q4KN68 170 aa9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 DSCR8Q96T75 97 aa9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 LRRC37A2A6NM11 1700 aa9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 SRSF2Q01130 221 aaKnown RBP9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 C15orf32Q32M92 178 aa9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 POLEQ07864 2286 aa9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 SPTBN1Q01082 2364 aaKnown RBP9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 H3BT86 120 aa9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 RHODO00212 210 aa9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 LTAP01374 205 aa9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 PRR25Q96S07 402 aa9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 SIGLEC9Q9Y336 463 aa9.48□□□□□ -0.89
CSPG4P12-201ENST00000558282 MRPL23Q16540 153 aaKnown RBP9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 ZNF493Q6ZR52 646 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 STHQ8IWL8 128 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 CD177Q8N6Q3 437 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 HS3ST6Q96QI5 342 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 WIPF3A6NGB9 483 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 IGKV1-39P01597 117 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 IGKV1D-39P04432 117 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 IGHV1-3A0A0C4DH29 117 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 PRR20EP86478 221 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 PRR20CP86479 221 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 PRR20DP86480 221 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 PRR20BP86481 221 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 PRR20AP86496 221 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 C20orf204Q6ZNR8 217 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 K7EM74 188 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 IGHV3-11P01762 117 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 Q6ZUT4 128 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 ZNF581Q9P0T4 197 aa9.47□□□□□ -0.89
CSPG4P12-201ENST00000558282 FREM3P0C091 2139 aa9.46□□□□□ -0.89
CSPG4P12-201ENST00000558282 DOCK4Q8N1I0 1966 aa9.46□□□□□ -0.89
CSPG4P12-201ENST00000558282 FXYD2P54710 66 aa9.46□□□□□ -0.89
CSPG4P12-201ENST00000558282 CMC4P56277 68 aaPredicted RBP9.46□□□□□ -0.89
CSPG4P12-201ENST00000558282 Q71RC1 249 aaPredicted RBP9.46□□□□□ -0.89
CSPG4P12-201ENST00000558282 IGHV1-69DA0A0B4J2H0 117 aa9.46□□□□□ -0.9
CSPG4P12-201ENST00000558282 C5orf63A6NC05 138 aa9.46□□□□□ -0.9
CSPG4P12-201ENST00000558282 INS-IGF2F8WCM5 200 aa9.46□□□□□ -0.9
CSPG4P12-201ENST00000558282 INSP01308 110 aa9.46□□□□□ -0.9
CSPG4P12-201ENST00000558282 IGHV1-8P0DP01 117 aa9.46□□□□□ -0.9
CSPG4P12-201ENST00000558282 NDUFV3P56181 108 aaKnown RBP9.46□□□□□ -0.9
CSPG4P12-201ENST00000558282 SDHAF1A6NFY7 115 aa9.46□□□□□ -0.9
CSPG4P12-201ENST00000558282 CDK2AP2O75956 126 aa9.46□□□□□ -0.9
CSPG4P12-201ENST00000558282 DUX4L9Q6RFH8 374 aaPredicted RBP9.46□□□□□ -0.9
CSPG4P12-201ENST00000558282 NDUFA4L2Q9NRX3 87 aa9.46□□□□□ -0.9
CSPG4P12-201ENST00000558282 F6UB75 175 aa9.45□□□□□ -0.9
CSPG4P12-201ENST00000558282 IGHG3P01860 377 aa9.45□□□□□ -0.9
CSPG4P12-201ENST00000558282 MLANAQ16655 118 aa9.45□□□□□ -0.9
CSPG4P12-201ENST00000558282 TFF1P04155 84 aa9.45□□□□□ -0.9
CSPG4P12-201ENST00000558282 C5orf24Q7Z6I8 188 aa9.45□□□□□ -0.9
CSPG4P12-201ENST00000558282 DPH3Q96FX2 82 aa9.45□□□□□ -0.9
CSPG4P12-201ENST00000558282 MPDZO75970 2070 aa9.45□□□□□ -0.9
CSPG4P12-201ENST00000558282 C5orf64Q2M2E5 130 aa9.45□□□□□ -0.9
CSPG4P12-201ENST00000558282 C8orf49Q96NF6 230 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms