RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 A0A0J9YX75 114 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 RBMY1BA6NDE4 496 aaKnown RBP7.73□□□□□ -1.17
LRRC28-204ENST00000558172 RBMY1EA6NEQ0 496 aaKnown RBP7.73□□□□□ -1.17
LRRC28-204ENST00000558172 KNCNA6PVL3 124 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 H3BMM0 161 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 UBE2CO00762 179 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 HBE1P02100 147 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 RBMY1DP0C7P1 496 aaKnown RBP7.73□□□□□ -1.17
LRRC28-204ENST00000558172 HLA-DMBP28068 263 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 CSN1S1P47710 185 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 FHITP49789 147 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 PPT1P50897 306 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 NUTF2P61970 127 aaKnown RBP7.73□□□□□ -1.17
LRRC28-204ENST00000558172 ICAM4Q14773 271 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 MORN3Q6PF18 240 aaPredicted RBP7.73□□□□□ -1.17
LRRC28-204ENST00000558172 TRPT1Q86TN4 253 aaKnown RBP7.73□□□□□ -1.17
LRRC28-204ENST00000558172 IQCF2Q8IXL9 164 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 ARL6IP6Q8N6S5 226 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 SFT2D1Q8WV19 159 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 B9D2Q9BPU9 175 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 NKX6-2Q9C056 277 aaPredicted RBP7.73□□□□□ -1.17
LRRC28-204ENST00000558172 Q9H3A6 140 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 OTORQ9NRC9 128 aa7.73□□□□□ -1.17
LRRC28-204ENST00000558172 DNAH9Q9NYC9 4486 aa7.72□□□□□ -1.17
LRRC28-204ENST00000558172 PRKDCP78527 4128 aaKnown RBP7.72□□□□□ -1.17
LRRC28-204ENST00000558172 TRAV1-1A0A0B4J248 108 aa7.72□□□□□ -1.17
LRRC28-204ENST00000558172 A0A1W2PRE2 83 aa7.72□□□□□ -1.17
LRRC28-204ENST00000558172 PGPA6NDG6 321 aa7.72□□□□□ -1.17
LRRC28-204ENST00000558172 RPL35AP18077 110 aaKnown RBP7.72□□□□□ -1.17
LRRC28-204ENST00000558172 FGF8P55075 233 aaPredicted RBP7.72□□□□□ -1.17
LRRC28-204ENST00000558172 GDF5OSQ5U4N7 250 aa7.72□□□□□ -1.17
LRRC28-204ENST00000558172 ALKAL2Q6UX46 152 aa7.72□□□□□ -1.17
LRRC28-204ENST00000558172 EXOC3-AS1Q8N2X6 119 aa7.72□□□□□ -1.17
LRRC28-204ENST00000558172 OR8A1Q8NGG7 326 aa7.72□□□□□ -1.17
LRRC28-204ENST00000558172 OR10J6PQ8NGY7 276 aa7.72□□□□□ -1.17
LRRC28-204ENST00000558172 CMTM2Q8TAZ6 248 aa7.72□□□□□ -1.17
LRRC28-204ENST00000558172 CSTL1Q9H114 145 aa7.72□□□□□ -1.17
LRRC28-204ENST00000558172 A8MTW9 85 aa7.71□□□□□ -1.18
LRRC28-204ENST00000558172 ZNF705FA8MVS1 300 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-204ENST00000558172 ZNF705EA8MWA4 302 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-204ENST00000558172 F6UB75 175 aa7.71□□□□□ -1.18
LRRC28-204ENST00000558172 M0R3E3 92 aa7.71□□□□□ -1.18
LRRC28-204ENST00000558172 NHLRC4P0CG21 123 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-204ENST00000558172 BLOC1S1P78537 153 aa7.71□□□□□ -1.18
LRRC28-204ENST00000558172 HAGHQ16775 308 aa7.71□□□□□ -1.18
LRRC28-204ENST00000558172 OR4B1Q8NGF8 309 aa7.71□□□□□ -1.18
LRRC28-204ENST00000558172 TMPRSS5Q9H3S3 457 aa7.71□□□□□ -1.18
LRRC28-204ENST00000558172 ARL2-SNX15V9GYD0 113 aa7.71□□□□□ -1.18
LRRC28-204ENST00000558172 RBAKDNA6NC62 111 aa7.7□□□□□ -1.18
LRRC28-204ENST00000558172 SLC25A5P05141 298 aaKnown RBP7.7□□□□□ -1.18
LRRC28-204ENST00000558172 CNN1P51911 297 aaKnown RBP7.7□□□□□ -1.18
LRRC28-204ENST00000558172 DEFB1P60022 68 aa7.7□□□□□ -1.18
LRRC28-204ENST00000558172 SUMO1P63165 101 aaKnown RBP7.7□□□□□ -1.18
LRRC28-204ENST00000558172 HIST1H1AQ02539 215 aaPredicted RBP7.7□□□□□ -1.18
LRRC28-204ENST00000558172 TEX261Q6UWH6 196 aa7.7□□□□□ -1.18
LRRC28-204ENST00000558172 SBSPONQ8IVN8 264 aa7.7□□□□□ -1.18
LRRC28-204ENST00000558172 LINC00477Q96M19 166 aa7.7□□□□□ -1.18
LRRC28-204ENST00000558172 C1QTNF4Q9BXJ3 329 aa7.7□□□□□ -1.18
LRRC28-204ENST00000558172 PPP1R14DQ9NXH3 145 aa7.7□□□□□ -1.18
LRRC28-204ENST00000558172 SERTM2A0A1B0GWG4 89 aa7.69□□□□□ -1.18
LRRC28-204ENST00000558172 FAM74A7A6NL05 159 aa7.69□□□□□ -1.18
LRRC28-204ENST00000558172 DIRC3C9JPN6 131 aa7.69□□□□□ -1.18
LRRC28-204ENST00000558172 PRAC2D3DTV9 90 aa7.69□□□□□ -1.18
LRRC28-204ENST00000558172 NPIPB6E9PJ23 425 aa7.69□□□□□ -1.18
LRRC28-204ENST00000558172 IFNA7P01567 189 aa7.69□□□□□ -1.18
LRRC28-204ENST00000558172 IGKV3-20P01619 116 aa7.69□□□□□ -1.18
LRRC28-204ENST00000558172 AMBPP02760 352 aa7.69□□□□□ -1.18
LRRC28-204ENST00000558172 PMS2P11Q13670 270 aa7.69□□□□□ -1.18
LRRC28-204ENST00000558172 C9orf47Q6ZRZ4 202 aa7.69□□□□□ -1.18
LRRC28-204ENST00000558172 Q6ZWC4 215 aa7.69□□□□□ -1.18
LRRC28-204ENST00000558172 C5orf17Q8NAS9 161 aa7.69□□□□□ -1.18
LRRC28-204ENST00000558172 TCEAL7Q9BRU2 100 aa7.69□□□□□ -1.18
LRRC28-204ENST00000558172 ZMAT4Q9H898 229 aa7.69□□□□□ -1.18
LRRC28-204ENST00000558172 A0A1B0GV50 99 aa7.68□□□□□ -1.18
LRRC28-204ENST00000558172 K7EQM0 130 aa7.68□□□□□ -1.18
LRRC28-204ENST00000558172 CA1P00915 261 aaPredicted RBP7.68□□□□□ -1.18
LRRC28-204ENST00000558172 IFNA1P01562 189 aa7.68□□□□□ -1.18
LRRC28-204ENST00000558172 ZNF705DP0CH99 300 aaPredicted RBP7.68□□□□□ -1.18
LRRC28-204ENST00000558172 ZNF705BP0CI00 300 aaPredicted RBP7.68□□□□□ -1.18
LRRC28-204ENST00000558172 UBE2G2P60604 165 aa7.68□□□□□ -1.18
LRRC28-204ENST00000558172 TMEM78Q5T7P6 136 aa7.68□□□□□ -1.18
LRRC28-204ENST00000558172 ZNF680Q8NEM1 530 aa7.68□□□□□ -1.18
LRRC28-204ENST00000558172 ODF3Q96PU9 254 aa7.68□□□□□ -1.18
LRRC28-204ENST00000558172 ASCL2Q99929 193 aa7.68□□□□□ -1.18
LRRC28-204ENST00000558172 SPATA25Q9BR10 227 aa7.68□□□□□ -1.18
LRRC28-204ENST00000558172 TXNDC17Q9BRA2 123 aa7.68□□□□□ -1.18
LRRC28-204ENST00000558172 TM2D3Q9BRN9 247 aa7.68□□□□□ -1.18
LRRC28-204ENST00000558172 MANBALQ9NQG1 85 aa7.68□□□□□ -1.18
LRRC28-204ENST00000558172 EPDR1Q9UM22 224 aa7.68□□□□□ -1.18
LRRC28-204ENST00000558172 TP53TG1Q9Y2A0 90 aa7.68□□□□□ -1.18
LRRC28-204ENST00000558172 YTHDF2Q9Y5A9 579 aaKnown RBP7.68□□□□□ -1.18
LRRC28-204ENST00000558172 FBLL1A6NHQ2 334 aaKnown RBP7.67□□□□□ -1.18
LRRC28-204ENST00000558172 GGTLC3B5MD39 225 aa7.67□□□□□ -1.18
LRRC28-204ENST00000558172 F6UZH7 168 aa7.67□□□□□ -1.18
LRRC28-204ENST00000558172 PAGE4O60829 102 aa7.67□□□□□ -1.18
LRRC28-204ENST00000558172 TSPOP30536 169 aa7.67□□□□□ -1.18
LRRC28-204ENST00000558172 TAGLN2P37802 199 aaKnown RBP7.67□□□□□ -1.18
LRRC28-204ENST00000558172 CST9LP1Q5W188 147 aa7.67□□□□□ -1.18
LRRC28-204ENST00000558172 AMTNQ6UX39 209 aa7.67□□□□□ -1.18
LRRC28-204ENST00000558172 LYPD6BQ8NI32 183 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms