RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 BMI1P35226 326 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 CMC4P56277 68 aaPredicted RBP5.55□□□□□ -1.52
SPG11-205ENST00000558080 RHOBP62745 196 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 CCL20P78556 96 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 MIC13Q5XKP0 118 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 KIR2DL5AQ8N109 375 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 SVBPQ8N300 66 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 THAP8Q8NA92 274 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 OR4X1Q8NH49 305 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 KIR2DL5BQ8NHK3 375 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 RAB24Q969Q5 203 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 RNF183Q96D59 192 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 ACY3Q96HD9 319 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 LYSTQ99698 3801 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 SCRT1Q9BWW7 348 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 CSTL1Q9H114 145 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 SLC35B3Q9H1N7 401 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 MS4A6AQ9H2W1 248 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 MANBALQ9NQG1 85 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 GNG13Q9P2W3 67 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 RABAC1Q9UI14 185 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 SLC45A2Q9UMX9 530 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 TP53TG1Q9Y2A0 90 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 TRAV30A0A087WSZ9 112 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 CXorf65A6NEN9 183 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 NDUFS6O75380 124 aaKnown RBP5.54□□□□□ -1.52
SPG11-205ENST00000558080 SNAPINO95295 136 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 IGKV1-17P01599 117 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 BCL2P10415 239 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 ADCYAP1P18509 176 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 OR10J1P30954 320 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 PSMB3P49720 205 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 RND2P52198 227 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 DEFB131AP59861 70 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 SELENOTP62341 195 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 LEMD1Q68G75 181 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 CYP2G1PQ6ZSU1 146 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 SSX7Q7RTT5 188 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 FAM24BQ8N5W8 94 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 STXBP6Q8NFX7 210 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 NPIPB3Q92617 1050 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 METTL26Q96S19 204 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 VAX2Q9UIW0 290 aa5.54□□□□□ -1.52
SPG11-205ENST00000558080 PLECQ15149 4684 aaKnown RBP5.53□□□□□ -1.52
SPG11-205ENST00000558080 A0A1W2PS18 150 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 ZFP92A6NM28 416 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 C9JQL5 133 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 SCGB2A1O75556 95 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 CXorf1O96002 111 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 FABP1P07148 127 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 SRP19P09132 144 aaKnown RBP5.53□□□□□ -1.52
SPG11-205ENST00000558080 LINC00869P0C866 280 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 IGLC1P0CG04 106 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 STAG3L2P0CL84 134 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 STAG3L3P0CL85 134 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 CRYBB3P26998 211 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 FGF8P55075 233 aaPredicted RBP5.53□□□□□ -1.52
SPG11-205ENST00000558080 IQCF2Q8IXL9 164 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 OR1L4Q8NGR5 311 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 RXFP4Q8TDU9 374 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 Q8WTZ3 238 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 GATAD1Q8WUU5 269 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 PFDN5Q99471 154 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 TRGV9Q99603 122 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 RARRES2Q99969 163 aa5.53□□□□□ -1.52
SPG11-205ENST00000558080 MRPL32Q9BYC8 188 aaKnown RBP5.53□□□□□ -1.52
SPG11-205ENST00000558080 NKX6-2Q9C056 277 aaPredicted RBP5.53□□□□□ -1.52
SPG11-205ENST00000558080 DNAH1Q9P2D7 4330 aa5.52□□□□□ -1.53
SPG11-205ENST00000558080 IGKV1OR2-108A0A075B7D4 117 aa5.52□□□□□ -1.53
SPG11-205ENST00000558080 TRAV2A0A0B4J234 112 aa5.52□□□□□ -1.53
SPG11-205ENST00000558080 K7EQG2 157 aa5.52□□□□□ -1.53
SPG11-205ENST00000558080 CA1P00915 261 aaPredicted RBP5.52□□□□□ -1.53
SPG11-205ENST00000558080 OR5G3P0C626 314 aa5.52□□□□□ -1.53
SPG11-205ENST00000558080 ZNF688P0C7X2 276 aa5.52□□□□□ -1.53
SPG11-205ENST00000558080 TAS2R45P59539 299 aa5.52□□□□□ -1.53
SPG11-205ENST00000558080 YPEL3P61236 119 aaPredicted RBP5.52□□□□□ -1.53
SPG11-205ENST00000558080 GCSAMLQ5JQS6 135 aa5.52□□□□□ -1.53
SPG11-205ENST00000558080 SOHLH1Q5JUK2 328 aa5.52□□□□□ -1.53
SPG11-205ENST00000558080 OR11H2Q8NH07 326 aa5.52□□□□□ -1.53
SPG11-205ENST00000558080 GRAMD2BQ96HH9 432 aa5.52□□□□□ -1.53
SPG11-205ENST00000558080 TXNDC17Q9BRA2 123 aa5.52□□□□□ -1.53
SPG11-205ENST00000558080 FUT9Q9Y231 359 aa5.52□□□□□ -1.53
SPG11-205ENST00000558080 HYDINQ4G0P3 5121 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 IGKV1D-37A0A075B6S9 117 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 NUPR2A6NF83 97 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 KNCNA6PVL3 124 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 DEFB4AO15263 64 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 HMGB3O15347 200 aaKnown RBP5.51□□□□□ -1.53
SPG11-205ENST00000558080 COX7A2P2O60397 106 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 SCO1O75880 301 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 LY6G6CO95867 125 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 IL4P05112 153 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 RD3LP0DJH9 198 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 ARL14EPLP0DKL9 152 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 MEF2BQ02080 365 aaPredicted RBP5.51□□□□□ -1.53
SPG11-205ENST00000558080 USF2Q15853 346 aaPredicted RBP5.51□□□□□ -1.53
SPG11-205ENST00000558080 FAM78BQ5VT40 261 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 CEMP1Q6PRD7 247 aaPredicted RBP5.51□□□□□ -1.53
SPG11-205ENST00000558080 C16orf54Q6UWD8 224 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 PQLC2Q6ZP29 291 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms