RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 C9orf85Q96MD7 179 aa8.7□□□□□ -1.02
SEMA4B-204ENST00000558065 HS3ST6Q96QI5 342 aa8.7□□□□□ -1.02
SEMA4B-204ENST00000558065 FAM173AQ9BQD7 235 aa8.7□□□□□ -1.02
SEMA4B-204ENST00000558065 PFN2P35080 140 aa8.7□□□□□ -1.02
SEMA4B-204ENST00000558065 BRWD1-AS2P59051 145 aa8.7□□□□□ -1.02
SEMA4B-204ENST00000558065 MLST8Q9BVC4 326 aa8.7□□□□□ -1.02
SEMA4B-204ENST00000558065 SLC25A2Q9BXI2 301 aa8.7□□□□□ -1.02
SEMA4B-204ENST00000558065 AAMDCQ9H7C9 122 aa8.7□□□□□ -1.02
SEMA4B-204ENST00000558065 CLPSP04118 112 aa8.7□□□□□ -1.02
SEMA4B-204ENST00000558065 MRPS21P82921 87 aaKnown RBP8.7□□□□□ -1.02
SEMA4B-204ENST00000558065 DRAM1Q8N682 238 aa8.7□□□□□ -1.02
SEMA4B-204ENST00000558065 SDK2Q58EX2 2172 aa8.7□□□□□ -1.02
SEMA4B-204ENST00000558065 C2orf16Q68DN1 1984 aa8.7□□□□□ -1.02
SEMA4B-204ENST00000558065 PEX7O00628 323 aa8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 AVPP01185 164 aa8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 MNX1P50219 401 aaPredicted RBP8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 MBD3L2Q8NHZ7 208 aaPredicted RBP8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 SCNM1Q9BWG6 230 aa8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 OCIAD1Q9NX40 245 aa8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 SVILO95425 2214 aa8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 CACNA1GO43497 2377 aa8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 INS-IGF2F8WCM5 200 aa8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 HLA-DMBP28068 263 aa8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 ITLN1Q8WWA0 313 aa8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 SLC25A39Q9BZJ4 359 aaPredicted RBP8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 NPIPB11E5RHQ5 1161 aa8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 GFERP55789 205 aa8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 KLRB1Q12918 225 aa8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 C16orf47Q6ZP98 133 aaPredicted RBP8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 DEFB126Q9BYW3 111 aa8.69□□□□□ -1.02
SEMA4B-204ENST00000558065 A0A0U1RRA0 63 aa8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 FAM240AA0A1B0GVK7 77 aa8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 MRPL20Q9BYC9 149 aaKnown RBP8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 ZNF492Q9P255 531 aa8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 RIF1Q5UIP0 2472 aaKnown RBP8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 TRAV17A0A0B4J275 112 aa8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 FAM90A10PA6NDY2 464 aa8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 FAM90A20PA6NIJ5 464 aa8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 FAM90A7PA6NKC0 464 aa8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 FAM90A22PA8MWA6 464 aa8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 FAM90A12PA8MX19 464 aa8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 TRACP01848 142 aa8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 LGALS1P09382 135 aaKnown RBP8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 IL17RELQ6ZVW7 336 aa8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 ZNF329Q86UD4 541 aa8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 NDUFA11Q86Y39 141 aa8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 IL17DQ8TAD2 202 aa8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 C1orf195Q5TG92 126 aa8.68□□□□□ -1.02
SEMA4B-204ENST00000558065 ATP5G1P05496 136 aa8.67□□□□□ -1.02
SEMA4B-204ENST00000558065 PLXDC1Q8IUK5 500 aa8.67□□□□□ -1.02
SEMA4B-204ENST00000558065 MUC22E2RYF6 1773 aaPredicted RBP8.67□□□□□ -1.02
SEMA4B-204ENST00000558065 DPM2O94777 84 aa8.67□□□□□ -1.02
SEMA4B-204ENST00000558065 U3KQK5 164 aa8.67□□□□□ -1.02
SEMA4B-204ENST00000558065 P01737 135 aa8.67□□□□□ -1.02
SEMA4B-204ENST00000558065 SLC25A16P16260 332 aa8.67□□□□□ -1.02
SEMA4B-204ENST00000558065 BRCA2P51587 3418 aa8.67□□□□□ -1.02
SEMA4B-204ENST00000558065 D6R8Y8 96 aa8.66□□□□□ -1.02
SEMA4B-204ENST00000558065 ARMS2P0C7Q2 107 aa8.66□□□□□ -1.02
SEMA4B-204ENST00000558065 EIF4EBP1Q13541 118 aaPredicted RBP8.66□□□□□ -1.02
SEMA4B-204ENST00000558065 UBALD1Q8TB05 177 aa8.66□□□□□ -1.02
SEMA4B-204ENST00000558065 TRBV6-6A0A0A6YYG2 114 aa8.66□□□□□ -1.02
SEMA4B-204ENST00000558065 CDSNQ15517 529 aa8.66□□□□□ -1.02
SEMA4B-204ENST00000558065 TRAV40A0A0B4J280 105 aa8.66□□□□□ -1.02
SEMA4B-204ENST00000558065 EPOPA6NHQ4 379 aa8.65□□□□□ -1.02
SEMA4B-204ENST00000558065 C6orf226Q5I0X4 101 aa8.65□□□□□ -1.02
SEMA4B-204ENST00000558065 NABP1Q96AH0 204 aa8.65□□□□□ -1.02
SEMA4B-204ENST00000558065 FAM167A-AS1Q96KT0 104 aa8.65□□□□□ -1.02
SEMA4B-204ENST00000558065 SHANK2-AS3Q9BTD1 123 aa8.65□□□□□ -1.02
SEMA4B-204ENST00000558065 SPANXDQ9BXN6 97 aa8.65□□□□□ -1.02
SEMA4B-204ENST00000558065 MORN5Q5VZ52 161 aa8.65□□□□□ -1.02
SEMA4B-204ENST00000558065 Q6ZT83 130 aa8.65□□□□□ -1.02
SEMA4B-204ENST00000558065 FLVCR1-AS1Q8TAF5 88 aa8.65□□□□□ -1.02
SEMA4B-204ENST00000558065 METRNQ9UJH8 293 aa8.65□□□□□ -1.02
SEMA4B-204ENST00000558065 MKI67P46013 3256 aaKnown RBP8.65□□□□□ -1.02
SEMA4B-204ENST00000558065 H3BMM0 161 aa8.65□□□□□ -1.03
SEMA4B-204ENST00000558065 ZNF22P17026 224 aaPredicted RBP8.65□□□□□ -1.03
SEMA4B-204ENST00000558065 TWIST1Q15672 202 aa8.65□□□□□ -1.03
SEMA4B-204ENST00000558065 MRPL14Q6P1L8 145 aaKnown RBP8.65□□□□□ -1.03
SEMA4B-204ENST00000558065 SLC25A48Q6ZT89 311 aaKnown RBP8.65□□□□□ -1.03
SEMA4B-204ENST00000558065 MDP1Q86V88 176 aa8.65□□□□□ -1.03
SEMA4B-204ENST00000558065 LINC00311Q8N616 119 aa8.65□□□□□ -1.03
SEMA4B-204ENST00000558065 UBE2WQ96B02 151 aa8.65□□□□□ -1.03
SEMA4B-204ENST00000558065 IGHV3-15A0A0B4J1V0 119 aa8.64□□□□□ -1.03
SEMA4B-204ENST00000558065 TRAV13-1A0A0B4J241 112 aa8.64□□□□□ -1.03
SEMA4B-204ENST00000558065 C17orf98A8MV24 154 aa8.64□□□□□ -1.03
SEMA4B-204ENST00000558065 TMEM178BH3BS89 294 aa8.64□□□□□ -1.03
SEMA4B-204ENST00000558065 GFRA3O60609 400 aa8.64□□□□□ -1.03
SEMA4B-204ENST00000558065 PLGLB1Q02325 96 aa8.64□□□□□ -1.03
SEMA4B-204ENST00000558065 GOLT1AQ6ZVE7 132 aa8.64□□□□□ -1.03
SEMA4B-204ENST00000558065 LAMA3Q16787 3333 aa8.64□□□□□ -1.03
SEMA4B-204ENST00000558065 A0A1B0GUT8 65 aa8.64□□□□□ -1.03
SEMA4B-204ENST00000558065 UPK3BQ9BT76 320 aa8.64□□□□□ -1.03
SEMA4B-204ENST00000558065 FOXC2Q99958 501 aa8.64□□□□□ -1.03
SEMA4B-204ENST00000558065 PROK2Q9HC23 129 aa8.64□□□□□ -1.03
SEMA4B-204ENST00000558065 TNRC6BQ9UPQ9 1833 aaKnown RBP8.64□□□□□ -1.03
SEMA4B-204ENST00000558065 INTS1Q8N201 2190 aaKnown RBP8.63□□□□□ -1.03
SEMA4B-204ENST00000558065 FGF12P61328 243 aa8.63□□□□□ -1.03
SEMA4B-204ENST00000558065 C3orf36Q3SXR2 165 aa8.63□□□□□ -1.03
SEMA4B-204ENST00000558065 AAED1Q7RTV5 226 aa8.63□□□□□ -1.03
SEMA4B-204ENST00000558065 FAM19A1Q7Z5A9 133 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms