RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 APRG1Q8IVJ8 170 aa10.43□□□□□ -0.74
SUPT16H-208ENST00000557652 RPUSD4Q96CM3 377 aaKnown RBP10.43□□□□□ -0.74
SUPT16H-208ENST00000557652 TCEAL7Q9BRU2 100 aa10.43□□□□□ -0.74
SUPT16H-208ENST00000557652 C1QTNF4Q9BXJ3 329 aa10.43□□□□□ -0.74
SUPT16H-208ENST00000557652 MEGF8Q7Z7M0 2845 aa10.43□□□□□ -0.74
SUPT16H-208ENST00000557652 RBAKDNA6NC62 111 aa10.42□□□□□ -0.74
SUPT16H-208ENST00000557652 AMBPP02760 352 aa10.42□□□□□ -0.74
SUPT16H-208ENST00000557652 SLC25A5P05141 298 aaKnown RBP10.42□□□□□ -0.74
SUPT16H-208ENST00000557652 NHLRC4P0CG21 123 aaPredicted RBP10.42□□□□□ -0.74
SUPT16H-208ENST00000557652 FHITP49789 147 aa10.42□□□□□ -0.74
SUPT16H-208ENST00000557652 BLOC1S1P78537 153 aa10.42□□□□□ -0.74
SUPT16H-208ENST00000557652 ACTL10Q5JWF8 245 aa10.42□□□□□ -0.74
SUPT16H-208ENST00000557652 OR8A1Q8NGG7 326 aa10.42□□□□□ -0.74
SUPT16H-208ENST00000557652 OR10J6PQ8NGY7 276 aa10.42□□□□□ -0.74
SUPT16H-208ENST00000557652 SFT2D1Q8WV19 159 aa10.42□□□□□ -0.74
SUPT16H-208ENST00000557652 C20orf173Q96LM9 149 aa10.42□□□□□ -0.74
SUPT16H-208ENST00000557652 CITED4Q96RK1 184 aa10.42□□□□□ -0.74
SUPT16H-208ENST00000557652 WFDC10AQ9H1F0 79 aa10.42□□□□□ -0.74
SUPT16H-208ENST00000557652 Q9H3A6 140 aa10.42□□□□□ -0.74
SUPT16H-208ENST00000557652 RBMY1BA6NDE4 496 aaKnown RBP10.41□□□□□ -0.74
SUPT16H-208ENST00000557652 RBMY1EA6NEQ0 496 aaKnown RBP10.41□□□□□ -0.74
SUPT16H-208ENST00000557652 FBLL1A6NHQ2 334 aaKnown RBP10.41□□□□□ -0.74
SUPT16H-208ENST00000557652 RBMY1DP0C7P1 496 aaKnown RBP10.41□□□□□ -0.74
SUPT16H-208ENST00000557652 RANP62826 216 aaKnown RBP10.41□□□□□ -0.74
SUPT16H-208ENST00000557652 PMS2P11Q13670 270 aa10.41□□□□□ -0.74
SUPT16H-208ENST00000557652 ICAM4Q14773 271 aa10.41□□□□□ -0.74
SUPT16H-208ENST00000557652 Q6ZWC4 215 aa10.41□□□□□ -0.74
SUPT16H-208ENST00000557652 RNF182Q8N6D2 247 aa10.41□□□□□ -0.74
SUPT16H-208ENST00000557652 CMTM2Q8TAZ6 248 aa10.41□□□□□ -0.74
SUPT16H-208ENST00000557652 ODF3Q96PU9 254 aa10.41□□□□□ -0.74
SUPT16H-208ENST00000557652 TXNDC17Q9BRA2 123 aa10.41□□□□□ -0.74
SUPT16H-208ENST00000557652 CSTL1Q9H114 145 aa10.41□□□□□ -0.74
SUPT16H-208ENST00000557652 PLA2G2EQ9NZK7 142 aa10.41□□□□□ -0.74
SUPT16H-208ENST00000557652 TRBV7-9A0A0J9YWB2 115 aa10.4□□□□□ -0.74
SUPT16H-208ENST00000557652 BOLA2-SMG1P6H3BVE0 249 aa10.4□□□□□ -0.74
SUPT16H-208ENST00000557652 HMGB3O15347 200 aaKnown RBP10.4□□□□□ -0.74
SUPT16H-208ENST00000557652 TAGLN2P37802 199 aaKnown RBP10.4□□□□□ -0.74
SUPT16H-208ENST00000557652 SSX7Q7RTT5 188 aa10.4□□□□□ -0.74
SUPT16H-208ENST00000557652 C5orf17Q8NAS9 161 aa10.4□□□□□ -0.74
SUPT16H-208ENST00000557652 TP53TG1Q9Y2A0 90 aa10.4□□□□□ -0.74
SUPT16H-208ENST00000557652 KNCNA6PVL3 124 aa10.39□□□□□ -0.75
SUPT16H-208ENST00000557652 H3BTX0 84 aa10.39□□□□□ -0.75
SUPT16H-208ENST00000557652 K7EQM0 130 aa10.39□□□□□ -0.75
SUPT16H-208ENST00000557652 IFNA7P01567 189 aa10.39□□□□□ -0.75
SUPT16H-208ENST00000557652 HAGHQ16775 308 aa10.39□□□□□ -0.75
SUPT16H-208ENST00000557652 IQCF2Q8IXL9 164 aa10.39□□□□□ -0.75
SUPT16H-208ENST00000557652 LINC00477Q96M19 166 aa10.39□□□□□ -0.75
SUPT16H-208ENST00000557652 MANBALQ9NQG1 85 aa10.39□□□□□ -0.75
SUPT16H-208ENST00000557652 PPP1R14DQ9NXH3 145 aa10.39□□□□□ -0.75
SUPT16H-208ENST00000557652 PGPA6NDG6 321 aa10.38□□□□□ -0.75
SUPT16H-208ENST00000557652 ZNF705EA8MWA4 302 aaPredicted RBP10.38□□□□□ -0.75
SUPT16H-208ENST00000557652 NPIPB6E9PJ23 425 aa10.38□□□□□ -0.75
SUPT16H-208ENST00000557652 NMBP08949 121 aa10.38□□□□□ -0.75
SUPT16H-208ENST00000557652 SNRPCP09234 159 aaKnown RBP10.38□□□□□ -0.75
SUPT16H-208ENST00000557652 TSPOP30536 169 aa10.38□□□□□ -0.75
SUPT16H-208ENST00000557652 CNN1P51911 297 aaKnown RBP10.38□□□□□ -0.75
SUPT16H-208ENST00000557652 ZNF124Q15973 351 aa10.38□□□□□ -0.75
SUPT16H-208ENST00000557652 IGFL4Q6B9Z1 124 aa10.38□□□□□ -0.75
SUPT16H-208ENST00000557652 ALKAL2Q6UX46 152 aa10.38□□□□□ -0.75
SUPT16H-208ENST00000557652 C9orf47Q6ZRZ4 202 aa10.38□□□□□ -0.75
SUPT16H-208ENST00000557652 EXOC3-AS1Q8N2X6 119 aa10.38□□□□□ -0.75
SUPT16H-208ENST00000557652 SPATA25Q9BR10 227 aa10.38□□□□□ -0.75
SUPT16H-208ENST00000557652 BOLA1Q9Y3E2 137 aa10.38□□□□□ -0.75
SUPT16H-208ENST00000557652 LENEPQ9Y5L5 61 aa10.38□□□□□ -0.75
SUPT16H-208ENST00000557652 F6UZH7 168 aa10.37□□□□□ -0.75
SUPT16H-208ENST00000557652 M0R3E3 92 aa10.37□□□□□ -0.75
SUPT16H-208ENST00000557652 IFNA1P01562 189 aa10.37□□□□□ -0.75
SUPT16H-208ENST00000557652 HLA-DMBP28068 263 aa10.37□□□□□ -0.75
SUPT16H-208ENST00000557652 FGF8P55075 233 aaPredicted RBP10.37□□□□□ -0.75
SUPT16H-208ENST00000557652 HIST1H1AQ02539 215 aaPredicted RBP10.37□□□□□ -0.75
SUPT16H-208ENST00000557652 GDF5OSQ5U4N7 250 aa10.37□□□□□ -0.75
SUPT16H-208ENST00000557652 TEX261Q6UWH6 196 aa10.37□□□□□ -0.75
SUPT16H-208ENST00000557652 OR4B1Q8NGF8 309 aa10.37□□□□□ -0.75
SUPT16H-208ENST00000557652 HIST1H2BAQ96A08 127 aa10.37□□□□□ -0.75
SUPT16H-208ENST00000557652 TM2D3Q9BRN9 247 aa10.37□□□□□ -0.75
SUPT16H-208ENST00000557652 ZMAT4Q9H898 229 aa10.37□□□□□ -0.75
SUPT16H-208ENST00000557652 FAM74A7A6NL05 159 aa10.36□□□□□ -0.75
SUPT16H-208ENST00000557652 ZNF705FA8MVS1 300 aaPredicted RBP10.36□□□□□ -0.75
SUPT16H-208ENST00000557652 DIRC3C9JPN6 131 aa10.36□□□□□ -0.75
SUPT16H-208ENST00000557652 RPL35AP18077 110 aaKnown RBP10.36□□□□□ -0.75
SUPT16H-208ENST00000557652 TMEM78Q5T7P6 136 aa10.36□□□□□ -0.75
SUPT16H-208ENST00000557652 LYPD6BQ8NI32 183 aa10.36□□□□□ -0.75
SUPT16H-208ENST00000557652 C20orf144Q9BQM9 153 aa10.36□□□□□ -0.75
SUPT16H-208ENST00000557652 F6UB75 175 aa10.35□□□□□ -0.75
SUPT16H-208ENST00000557652 EIF3GO75821 320 aaKnown RBP eCLIP10.35□□□□□ -0.75
SUPT16H-208ENST00000557652 CA1P00915 261 aaPredicted RBP10.35□□□□□ -0.75
SUPT16H-208ENST00000557652 SUMO1P63165 101 aaKnown RBP10.35□□□□□ -0.75
SUPT16H-208ENST00000557652 AMTNQ6UX39 209 aa10.35□□□□□ -0.75
SUPT16H-208ENST00000557652 SBSPONQ8IVN8 264 aa10.35□□□□□ -0.75
SUPT16H-208ENST00000557652 ZNF680Q8NEM1 530 aa10.35□□□□□ -0.75
SUPT16H-208ENST00000557652 ATG101Q9BSB4 218 aa10.35□□□□□ -0.75
SUPT16H-208ENST00000557652 TMPRSS5Q9H3S3 457 aa10.35□□□□□ -0.75
SUPT16H-208ENST00000557652 GGTLC3B5MD39 225 aa10.34□□□□□ -0.75
SUPT16H-208ENST00000557652 NDUFS6O75380 124 aaKnown RBP10.34□□□□□ -0.75
SUPT16H-208ENST00000557652 TCRAP04437 139 aa10.34□□□□□ -0.75
SUPT16H-208ENST00000557652 LEPP41159 167 aa10.34□□□□□ -0.75
SUPT16H-208ENST00000557652 CDKN1BP46527 198 aa10.34□□□□□ -0.75
SUPT16H-208ENST00000557652 CYB561D1Q8N8Q1 229 aa10.34□□□□□ -0.75
SUPT16H-208ENST00000557652 RNF183Q96D59 192 aa10.34□□□□□ -0.75
SUPT16H-208ENST00000557652 EPDR1Q9UM22 224 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms