RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 SCGB1C1Q8TD33 95 aa9.25□□□□□ -0.93
TMEM260-215ENST00000557626 UHRF2Q96PU4 802 aa9.25□□□□□ -0.93
TMEM260-215ENST00000557626 PSMG3Q9BT73 122 aaPredicted RBP9.25□□□□□ -0.93
TMEM260-215ENST00000557626 ZNF471Q9BX82 626 aaPredicted RBP9.25□□□□□ -0.93
TMEM260-215ENST00000557626 SMPXQ9UHP9 88 aa9.25□□□□□ -0.93
TMEM260-215ENST00000557626 IGHV7-4-1A0A0J9YVY3 117 aa9.24□□□□□ -0.93
TMEM260-215ENST00000557626 EIF3GO75821 320 aaKnown RBP eCLIP9.24□□□□□ -0.93
TMEM260-215ENST00000557626 HNRNPCP07910 306 aaKnown RBP eCLIP9.24□□□□□ -0.93
TMEM260-215ENST00000557626 SPART-AS1P0CW21 52 aa9.24□□□□□ -0.93
TMEM260-215ENST00000557626 ORM2P19652 201 aa9.24□□□□□ -0.93
TMEM260-215ENST00000557626 RAB31Q13636 194 aa9.24□□□□□ -0.93
TMEM260-215ENST00000557626 TTC32Q5I0X7 151 aa9.24□□□□□ -0.93
TMEM260-215ENST00000557626 SPATA31B1PQ5VZV4 182 aa9.24□□□□□ -0.93
TMEM260-215ENST00000557626 STHQ8IWL8 128 aa9.24□□□□□ -0.93
TMEM260-215ENST00000557626 BAP18Q8IXM2 172 aa9.24□□□□□ -0.93
TMEM260-215ENST00000557626 OR2G3Q8NGZ4 309 aa9.24□□□□□ -0.93
TMEM260-215ENST00000557626 PBDC1Q9BVG4 233 aa9.24□□□□□ -0.93
TMEM260-215ENST00000557626 KRTAP1-5Q9BYS1 174 aa9.24□□□□□ -0.93
TMEM260-215ENST00000557626 SLC25A32Q9H2D1 315 aa9.24□□□□□ -0.93
TMEM260-215ENST00000557626 DAZ1Q9NQZ3 744 aaKnown RBP9.24□□□□□ -0.93
TMEM260-215ENST00000557626 IGHV3-66A0A0C4DH42 116 aa9.23□□□□□ -0.93
TMEM260-215ENST00000557626 H3BRN7 92 aa9.23□□□□□ -0.93
TMEM260-215ENST00000557626 CHEK1O14757 476 aa9.23□□□□□ -0.93
TMEM260-215ENST00000557626 BUB3O43684 328 aa9.23□□□□□ -0.93
TMEM260-215ENST00000557626 HYPMO75409 117 aa9.23□□□□□ -0.93
TMEM260-215ENST00000557626 FABP1P07148 127 aa9.23□□□□□ -0.93
TMEM260-215ENST00000557626 RAB2AP61019 212 aa9.23□□□□□ -0.93
TMEM260-215ENST00000557626 FFAR4Q5NUL3 377 aa9.23□□□□□ -0.93
TMEM260-215ENST00000557626 SLC51BQ86UW2 128 aa9.23□□□□□ -0.93
TMEM260-215ENST00000557626 OR1B1Q8NGR6 318 aa9.23□□□□□ -0.93
TMEM260-215ENST00000557626 ST8SIA2Q92186 375 aa9.23□□□□□ -0.93
TMEM260-215ENST00000557626 SHANK2-AS3Q9BTD1 123 aa9.23□□□□□ -0.93
TMEM260-215ENST00000557626 CLEC5AQ9NY25 188 aa9.23□□□□□ -0.93
TMEM260-215ENST00000557626 TRAV5A0A0B4J249 113 aa9.22□□□□□ -0.93
TMEM260-215ENST00000557626 MRPS12O15235 138 aaKnown RBP9.22□□□□□ -0.93
TMEM260-215ENST00000557626 OR5G3P0C626 314 aa9.22□□□□□ -0.93
TMEM260-215ENST00000557626 NPPCP23582 126 aa9.22□□□□□ -0.93
TMEM260-215ENST00000557626 ZNF726P1Q15940 193 aa9.22□□□□□ -0.93
TMEM260-215ENST00000557626 FAM90A2PQ658T7 463 aa9.22□□□□□ -0.93
TMEM260-215ENST00000557626 LEMD1Q68G75 181 aa9.22□□□□□ -0.93
TMEM260-215ENST00000557626 SSX7Q7RTT5 188 aa9.22□□□□□ -0.93
TMEM260-215ENST00000557626 ZNF709Q8N972 641 aa9.22□□□□□ -0.93
TMEM260-215ENST00000557626 TMED6Q8WW62 240 aa9.22□□□□□ -0.93
TMEM260-215ENST00000557626 GLMPQ8WWB7 406 aa9.22□□□□□ -0.93
TMEM260-215ENST00000557626 PPP1R14BQ96C90 147 aa9.22□□□□□ -0.93
TMEM260-215ENST00000557626 GNPNAT1Q96EK6 184 aaPredicted RBP9.22□□□□□ -0.93
TMEM260-215ENST00000557626 FAM167A-AS1Q96KT0 104 aa9.22□□□□□ -0.93
TMEM260-215ENST00000557626 RHPN1-AS1Q9BWJ2 59 aa9.22□□□□□ -0.93
TMEM260-215ENST00000557626 SLC25A39Q9BZJ4 359 aaPredicted RBP9.22□□□□□ -0.93
TMEM260-215ENST00000557626 SEPSECSQ9HD40 501 aaKnown RBP9.22□□□□□ -0.93
TMEM260-215ENST00000557626 DNAJC4Q9NNZ3 241 aa9.22□□□□□ -0.93
TMEM260-215ENST00000557626 RPRMQ9NS64 109 aa9.22□□□□□ -0.93
TMEM260-215ENST00000557626 ZNF98A6NK75 572 aa9.21□□□□□ -0.94
TMEM260-215ENST00000557626 C17orf112F2Z3M2 114 aa9.21□□□□□ -0.94
TMEM260-215ENST00000557626 SCGB2A1O75556 95 aa9.21□□□□□ -0.94
TMEM260-215ENST00000557626 SEC11BP0C7V7 166 aa9.21□□□□□ -0.94
TMEM260-215ENST00000557626 TPT1P13693 172 aaKnown RBP9.21□□□□□ -0.94
TMEM260-215ENST00000557626 C4BPBP20851 252 aa9.21□□□□□ -0.94
TMEM260-215ENST00000557626 PXDC1Q5TGL8 231 aa9.21□□□□□ -0.94
TMEM260-215ENST00000557626 C16orf54Q6UWD8 224 aa9.21□□□□□ -0.94
TMEM260-215ENST00000557626 MIR17HGQ75NE6 70 aa9.21□□□□□ -0.94
TMEM260-215ENST00000557626 METTL26Q96S19 204 aa9.21□□□□□ -0.94
TMEM260-215ENST00000557626 RNF2Q99496 336 aa9.21□□□□□ -0.94
TMEM260-215ENST00000557626 RABAC1Q9UI14 185 aa9.21□□□□□ -0.94
TMEM260-215ENST00000557626 HIGD1AQ9Y241 93 aa9.21□□□□□ -0.94
TMEM260-215ENST00000557626 MUC2Q02817 5179 aa9.21□□□□□ -0.94
TMEM260-215ENST00000557626 IGKV3-7A0A075B6H7 116 aa9.2□□□□□ -0.94
TMEM260-215ENST00000557626 COX7A2P2O60397 106 aa9.2□□□□□ -0.94
TMEM260-215ENST00000557626 FHITP49789 147 aa9.2□□□□□ -0.94
TMEM260-215ENST00000557626 CCL18P55774 89 aa9.2□□□□□ -0.94
TMEM260-215ENST00000557626 ERVFC1-1P60608 527 aa9.2□□□□□ -0.94
TMEM260-215ENST00000557626 SERF2P84101 59 aa9.2□□□□□ -0.94
TMEM260-215ENST00000557626 C10orf113Q5VZT2 155 aa9.2□□□□□ -0.94
TMEM260-215ENST00000557626 Q6ZRG5 221 aa9.2□□□□□ -0.94
TMEM260-215ENST00000557626 LINC00305Q7Z4B0 112 aa9.2□□□□□ -0.94
TMEM260-215ENST00000557626 A0A1W2PPQ1 181 aa9.19□□□□□ -0.94
TMEM260-215ENST00000557626 M6PRP20645 277 aa9.19□□□□□ -0.94
TMEM260-215ENST00000557626 GCSHP23434 173 aa9.19□□□□□ -0.94
TMEM260-215ENST00000557626 EMP1P54849 157 aa9.19□□□□□ -0.94
TMEM260-215ENST00000557626 FAM74A1Q5RGS3 127 aa9.19□□□□□ -0.94
TMEM260-215ENST00000557626 NIPSNAP3BQ9BS92 247 aa9.19□□□□□ -0.94
TMEM260-215ENST00000557626 SLC25A2Q9BXI2 301 aa9.19□□□□□ -0.94
TMEM260-215ENST00000557626 Q9H3A6 140 aa9.19□□□□□ -0.94
TMEM260-215ENST00000557626 Q9H8V8 135 aa9.19□□□□□ -0.94
TMEM260-215ENST00000557626 KCNIP2Q9NS61 270 aa9.19□□□□□ -0.94
TMEM260-215ENST00000557626 LINC00588Q9Y4M8 146 aa9.19□□□□□ -0.94
TMEM260-215ENST00000557626 TNXBP22105 4242 aa9.19□□□□□ -0.94
TMEM260-215ENST00000557626 DEFB131AP59861 70 aa9.18□□□□□ -0.94
TMEM260-215ENST00000557626 IFITM2Q01629 132 aa9.18□□□□□ -0.94
TMEM260-215ENST00000557626 ACOT6Q3I5F7 207 aaPredicted RBP9.18□□□□□ -0.94
TMEM260-215ENST00000557626 C1orf194Q5T5A4 169 aa9.18□□□□□ -0.94
TMEM260-215ENST00000557626 FAM78BQ5VT40 261 aa9.18□□□□□ -0.94
TMEM260-215ENST00000557626 FAM122CQ6P4D5 195 aa9.18□□□□□ -0.94
TMEM260-215ENST00000557626 GBGT1Q8N5D6 347 aa9.18□□□□□ -0.94
TMEM260-215ENST00000557626 CSNK1G2-AS1Q8NCQ2 148 aa9.18□□□□□ -0.94
TMEM260-215ENST00000557626 OR10G4Q8NGN3 311 aa9.18□□□□□ -0.94
TMEM260-215ENST00000557626 OR10G9Q8NGN4 311 aa9.18□□□□□ -0.94
TMEM260-215ENST00000557626 OR10G7Q8NGN6 311 aa9.18□□□□□ -0.94
TMEM260-215ENST00000557626 OR1L4Q8NGR5 311 aa9.18□□□□□ -0.94
TMEM260-215ENST00000557626 FUT9Q9Y231 359 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms