RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ENSAO43768 121 aaKnown RBP1.08□□□□□ -2.24
HIF1A-212ENST00000557538 SOD1P00441 154 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF90Q03938 601 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 ELOCQ15369 112 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 OR7A5Q15622 319 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 DEFB121Q5J5C9 76 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 C5orf38Q86SI9 138 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 MKXQ8IYA7 352 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 TMEM256Q8N2U0 113 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 OR10P1Q8NGE3 313 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 RNASE6Q93091 150 aaKnown RBP1.08□□□□□ -2.24
HIF1A-212ENST00000557538 SPACA5Q96QH8 159 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 WASHC3Q9Y3C0 194 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 KCNE3Q9Y6H6 103 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 PXMP4Q9Y6I8 212 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 IGHV3OR16-9A0A0B4J2B5 98 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 IGKV1D-13A0A0B4J2D9 117 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 A0A0G2JND7 137 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 MEIS3P1A6NDR6 274 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 J3QT63 122 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 K7EQS6 105 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 WISP3O95389 354 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-212ENST00000557538 IGKV1-13P0DP09 117 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 CCL4P13236 92 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 HLA-DRB4P13762 266 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 COX7CP15954 63 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF823P16415 610 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 MPV17P39210 176 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 LSM3P62310 102 aaKnown RBP1.08□□□□□ -2.24
HIF1A-212ENST00000557538 PNOCQ13519 176 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 LGALS9BQ3B8N2 356 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 LCE3EQ5T5B0 92 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 LGALS9CQ6DKI2 356 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF322Q6U7Q0 402 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-212ENST00000557538 ANKRD29Q8N6D5 301 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 NT5CQ8TCD5 201 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 GNPNAT1Q96EK6 184 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-212ENST00000557538 AQP10Q96PS8 301 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 POLR2J2Q9GZM3 115 aaKnown RBP1.08□□□□□ -2.24
HIF1A-212ENST00000557538 CXCL16Q9H2A7 254 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF222Q9UK12 451 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 HLA-DRB4X5D2U9 266 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 CCDC88CQ9P219 2028 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 TNRC6AQ8NDV7 1962 aaKnown RBP1.08□□□□□ -2.24
HIF1A-212ENST00000557538 TRAV12-2A0A075B6T6 113 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 TRGV5A0A0B4J1U4 118 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 SPRR5A0A1B0GTR4 108 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 C2orf70A6NJV1 201 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 A6NN06 94 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 CYSRT1A8MQ03 144 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 A8MUN3 132 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 E7EQL1 145 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 H7C1H1 209 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 J3QR89 54 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 NDUFC2O95298 119 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 TCL1BO95988 128 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 IGLV2-23P01705 113 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 BGLAPP02818 100 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 GUCA1AP43080 201 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-212ENST00000557538 LINC00313P59037 77 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 VMA21Q3ZAQ7 101 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 Q6P435 159 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 LYPD5Q6UWN5 251 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 IGFL3Q6UXB1 125 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 OR8B3Q8NGG8 313 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 OR5H2Q8NGV7 314 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 OR10AG1Q8NH19 301 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 LRRC29Q8WV35 223 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 AQP3Q92482 292 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 PRELID3AQ96N28 172 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 OR8B2Q96RD0 313 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 ULBP3Q9BZM4 244 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 SLC35B3Q9H1N7 401 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 CCDC167Q9P0B6 97 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 RABAC1Q9UI14 185 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 PCTPQ9UKL6 214 aa1.08□□□□□ -2.24
HIF1A-212ENST00000557538 ANKRD36A6QL64 1941 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 MUC22E2RYF6 1773 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-212ENST00000557538 PLXNB2O15031 1838 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 IGLV11-55A0A075B6I3 123 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 CCL15-CCL14A0A0B4J2E2 113 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 C3orf85A0A1B0GTC6 90 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 C19orf71A6NCJ1 209 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 GABARAPH6UMI1 98 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 ANGPTL7O43827 346 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 APOMO95445 188 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 P01737 135 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 GYPAP02724 150 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 LINC00032P0C843 101 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 PIPP12273 146 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-212ENST00000557538 CD70P32970 193 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 PPP1CCP36873 323 aaKnown RBP1.07□□□□□ -2.24
HIF1A-212ENST00000557538 DSCR4P56555 118 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-212ENST00000557538 KRTAP12-2P59991 146 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 PPP1CAP62136 330 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 CRADDP78560 199 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 HES1Q14469 280 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 MSMO1Q15800 293 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 Q8N9L7 120 aa1.07□□□□□ -2.24
HIF1A-212ENST00000557538 APCDD1LQ8NCL9 501 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms