RNA–Protein interactions for RNA: ENST00000557307.1

SYNE2-227, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 526 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-227ENST00000557307 HOXA5P20719 270 aa7.62□□□□□ -1.19
SYNE2-227ENST00000557307 TAS2R60P59551 318 aa7.62□□□□□ -1.19
SYNE2-227ENST00000557307 IFITM3Q01628 133 aa7.62□□□□□ -1.19
SYNE2-227ENST00000557307 BAXQ07812 192 aa7.62□□□□□ -1.19
SYNE2-227ENST00000557307 ERCC8Q13216 396 aa7.62□□□□□ -1.19
SYNE2-227ENST00000557307 ZNF846Q147U1 533 aa7.62□□□□□ -1.19
SYNE2-227ENST00000557307 RNF212Q495C1 297 aa7.62□□□□□ -1.19
SYNE2-227ENST00000557307 PXDC1Q5TGL8 231 aa7.62□□□□□ -1.19
SYNE2-227ENST00000557307 Q6ZQT7 251 aa7.62□□□□□ -1.19
SYNE2-227ENST00000557307 BPIFA4PQ86YQ2 179 aa7.62□□□□□ -1.19
SYNE2-227ENST00000557307 TMEM252Q8N6L7 170 aa7.62□□□□□ -1.19
SYNE2-227ENST00000557307 ZNRF2Q8NHG8 242 aa7.62□□□□□ -1.19
SYNE2-227ENST00000557307 SLC50A1Q9BRV3 221 aa7.62□□□□□ -1.19
SYNE2-227ENST00000557307 LYRM2Q9NU23 88 aaPredicted RBP7.62□□□□□ -1.19
SYNE2-227ENST00000557307 NPIPB6E9PJ23 425 aa7.61□□□□□ -1.19
SYNE2-227ENST00000557307 NDUFB4O95168 129 aa7.61□□□□□ -1.19
SYNE2-227ENST00000557307 S100A7P31151 101 aa7.61□□□□□ -1.19
SYNE2-227ENST00000557307 PRR9Q5T870 116 aa7.61□□□□□ -1.19
SYNE2-227ENST00000557307 C16orf74Q96GX8 76 aa7.61□□□□□ -1.19
SYNE2-227ENST00000557307 KRTAP4-5Q9BYR2 181 aa7.61□□□□□ -1.19
SYNE2-227ENST00000557307 KRTAP1-5Q9BYS1 174 aa7.61□□□□□ -1.19
SYNE2-227ENST00000557307 SLC39A9Q9NUM3 307 aa7.61□□□□□ -1.19
SYNE2-227ENST00000557307 UQCC1Q9NVA1 299 aa7.61□□□□□ -1.19
SYNE2-227ENST00000557307 PPP1R14DQ9NXH3 145 aa7.61□□□□□ -1.19
SYNE2-227ENST00000557307 LINC00588Q9Y4M8 146 aa7.61□□□□□ -1.19
SYNE2-227ENST00000557307 PXMP4Q9Y6I8 212 aa7.61□□□□□ -1.19
SYNE2-227ENST00000557307 TRAV12-3A0A0B4J271 114 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 H0YIZ8 118 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 ATP5G1P05496 136 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 FGF7P21781 194 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 ATP5G3P48201 142 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 SULT1A1P50225 295 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 B2MP61769 119 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 NHLH2Q02577 135 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 TNP2Q05952 138 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 BTN1A1Q13410 526 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 CNPY1Q3B7I2 92 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 TMEM256Q8N2U0 113 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 LINC00612Q8N6U2 182 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 C15orf53Q8NAA6 179 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 TMEM263Q8WUH6 116 aaKnown RBP7.6□□□□□ -1.19
SYNE2-227ENST00000557307 CCDC32Q9BV29 185 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 DNAJC4Q9NNZ3 241 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 OR5AC2Q9NZP5 309 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 MUC4Q99102 2169 aa7.6□□□□□ -1.19
SYNE2-227ENST00000557307 TRBV19A0A075B6N1 114 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 A0A0J9YY99 117 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 FAM240BA0A1B0GVZ2 78 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 GAGE12BA1L429 117 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 CBY3A6NI87 242 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 H7BYZ3 331 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 EIF3GO75821 320 aaKnown RBP eCLIP7.59□□□□□ -1.19
SYNE2-227ENST00000557307 GAGE7O76087 117 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 GAGE12FP0CL80 117 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 GAGE12GP0CL81 117 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 GAGE12IP0CL82 117 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 RPL29P47914 159 aaKnown RBP7.59□□□□□ -1.19
SYNE2-227ENST00000557307 CD300CQ08708 224 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 MIR17HGQ75NE6 70 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 EXOC3-AS1Q8N2X6 119 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 OR10J6PQ8NGY7 276 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 THAP6Q8TBB0 222 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 SLC25A2Q9BXI2 301 aa7.59□□□□□ -1.19
SYNE2-227ENST00000557307 GPN1Q9HCN4 374 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-227ENST00000557307 TIMM8BQ9Y5J9 83 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-227ENST00000557307 TRAV26-1A0A087WT03 109 aa7.58□□□□□ -1.2
SYNE2-227ENST00000557307 IGKV2-40A0A087WW87 121 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-227ENST00000557307 NBDYA0A0U1RRE5 68 aa7.58□□□□□ -1.2
SYNE2-227ENST00000557307 IGKV2D-40P01614 121 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-227ENST00000557307 ASAH1Q13510 395 aa7.58□□□□□ -1.2
SYNE2-227ENST00000557307 LRRC37A5PQ49AS3 106 aa7.58□□□□□ -1.2
SYNE2-227ENST00000557307 C1orf134Q5TEV5 83 aa7.58□□□□□ -1.2
SYNE2-227ENST00000557307 Q6ZRG5 221 aa7.58□□□□□ -1.2
SYNE2-227ENST00000557307 Q6ZTI0 123 aa7.58□□□□□ -1.2
SYNE2-227ENST00000557307 OR1L4Q8NGR5 311 aa7.58□□□□□ -1.2
SYNE2-227ENST00000557307 FAM167A-AS1Q96KT0 104 aa7.58□□□□□ -1.2
SYNE2-227ENST00000557307 FAM19A4Q96LR4 140 aa7.58□□□□□ -1.2
SYNE2-227ENST00000557307 ATG101Q9BSB4 218 aa7.58□□□□□ -1.2
SYNE2-227ENST00000557307 NPCDR1Q9BY65 106 aa7.58□□□□□ -1.2
SYNE2-227ENST00000557307 TMPRSS5Q9H3S3 457 aa7.58□□□□□ -1.2
SYNE2-227ENST00000557307 S100A11P31949 105 aa7.57□□□□□ -1.2
SYNE2-227ENST00000557307 OR5I1Q13606 314 aa7.57□□□□□ -1.2
SYNE2-227ENST00000557307 S100A7AQ86SG5 101 aa7.57□□□□□ -1.2
SYNE2-227ENST00000557307 C11orf72Q8NBR9 251 aa7.57□□□□□ -1.2
SYNE2-227ENST00000557307 OR5C1Q8NGR4 320 aa7.57□□□□□ -1.2
SYNE2-227ENST00000557307 BLNKQ8WV28 456 aa7.57□□□□□ -1.2
SYNE2-227ENST00000557307 PFDN5Q99471 154 aa7.57□□□□□ -1.2
SYNE2-227ENST00000557307 C20orf144Q9BQM9 153 aa7.57□□□□□ -1.2
SYNE2-227ENST00000557307 AGPAT4-IT1Q9H0P7 198 aa7.57□□□□□ -1.2
SYNE2-227ENST00000557307 TP53TG3Q9ULZ0 132 aa7.57□□□□□ -1.2
SYNE2-227ENST00000557307 KLLNB2CW77 178 aa7.56□□□□□ -1.2
SYNE2-227ENST00000557307 MED14OSP0DP75 135 aa7.56□□□□□ -1.2
SYNE2-227ENST00000557307 PVALBP20472 110 aaPredicted RBP7.56□□□□□ -1.2
SYNE2-227ENST00000557307 LEPP41159 167 aa7.56□□□□□ -1.2
SYNE2-227ENST00000557307 CLINT1Q14677 625 aa7.56□□□□□ -1.2
SYNE2-227ENST00000557307 ZNF493Q6ZR52 646 aa7.56□□□□□ -1.2
SYNE2-227ENST00000557307 SSX7Q7RTT5 188 aa7.56□□□□□ -1.2
SYNE2-227ENST00000557307 STX12Q86Y82 276 aa7.56□□□□□ -1.2
SYNE2-227ENST00000557307 CHAC2Q8WUX2 184 aa7.56□□□□□ -1.2
SYNE2-227ENST00000557307 ZNF503Q96F45 646 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms