RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 TMBIM6P55061 237 aa6.01□□□□□ -1.45
VRK1-206ENST00000557222 UBE2MP61081 183 aaKnown RBP6.01□□□□□ -1.45
VRK1-206ENST00000557222 HIST1H1AQ02539 215 aaPredicted RBP6.01□□□□□ -1.45
VRK1-206ENST00000557222 FGL1Q08830 312 aa6.01□□□□□ -1.45
VRK1-206ENST00000557222 FCN2Q15485 313 aa6.01□□□□□ -1.45
VRK1-206ENST00000557222 SPANXN5Q5MJ07 72 aa6.01□□□□□ -1.45
VRK1-206ENST00000557222 SPATA12Q7Z6I5 190 aa6.01□□□□□ -1.45
VRK1-206ENST00000557222 RNF182Q8N6D2 247 aa6.01□□□□□ -1.45
VRK1-206ENST00000557222 DYNC2LI1Q8TCX1 351 aa6.01□□□□□ -1.45
VRK1-206ENST00000557222 RNASE8Q8TDE3 154 aaKnown RBP6.01□□□□□ -1.45
VRK1-206ENST00000557222 GNPNAT1Q96EK6 184 aaPredicted RBP6.01□□□□□ -1.45
VRK1-206ENST00000557222 MRPS26Q9BYN8 205 aaKnown RBP6.01□□□□□ -1.45
VRK1-206ENST00000557222 NOP10Q9NPE3 64 aaKnown RBP6.01□□□□□ -1.45
VRK1-206ENST00000557222 SFT2D2O95562 160 aa6□□□□□ -1.45
VRK1-206ENST00000557222 TNFSF8P32971 234 aa6□□□□□ -1.45
VRK1-206ENST00000557222 LCN15Q6UWW0 184 aa6□□□□□ -1.45
VRK1-206ENST00000557222 TMED4Q7Z7H5 227 aa6□□□□□ -1.45
VRK1-206ENST00000557222 CCDC190Q86UF4 302 aa6□□□□□ -1.45
VRK1-206ENST00000557222 CCDC28AQ8IWP9 274 aa6□□□□□ -1.45
VRK1-206ENST00000557222 CLRN3Q8NCR9 226 aa6□□□□□ -1.45
VRK1-206ENST00000557222 LRRC20Q8TCA0 184 aa6□□□□□ -1.45
VRK1-206ENST00000557222 RPUSD4Q96CM3 377 aaKnown RBP6□□□□□ -1.45
VRK1-206ENST00000557222 SLC50A1Q9BRV3 221 aa6□□□□□ -1.45
VRK1-206ENST00000557222 NPVFQ9HCQ7 196 aa6□□□□□ -1.45
VRK1-206ENST00000557222 SCRT2Q9NQ03 307 aa6□□□□□ -1.45
VRK1-206ENST00000557222 MRPS16Q9Y3D3 137 aaKnown RBP6□□□□□ -1.45
VRK1-206ENST00000557222 TRAV26-1A0A087WT03 109 aa5.99□□□□□ -1.45
VRK1-206ENST00000557222 ZNF701M0R085 212 aaPredicted RBP5.99□□□□□ -1.45
VRK1-206ENST00000557222 MRPS12O15235 138 aaKnown RBP5.99□□□□□ -1.45
VRK1-206ENST00000557222 OR5G3P0C626 314 aa5.99□□□□□ -1.45
VRK1-206ENST00000557222 LINC00869P0C866 280 aa5.99□□□□□ -1.45
VRK1-206ENST00000557222 DLK1P80370 383 aa5.99□□□□□ -1.45
VRK1-206ENST00000557222 DAZ2Q13117 558 aaKnown RBP5.99□□□□□ -1.45
VRK1-206ENST00000557222 OR5I1Q13606 314 aa5.99□□□□□ -1.45
VRK1-206ENST00000557222 TOMM5Q8N4H5 51 aa5.99□□□□□ -1.45
VRK1-206ENST00000557222 SMIM8Q96KF7 97 aa5.99□□□□□ -1.45
VRK1-206ENST00000557222 C18orf15Q96N68 181 aa5.99□□□□□ -1.45
VRK1-206ENST00000557222 ODF3Q96PU9 254 aa5.99□□□□□ -1.45
VRK1-206ENST00000557222 SLIRPQ9GZT3 109 aaKnown RBP5.99□□□□□ -1.45
VRK1-206ENST00000557222 ZNF331Q9NQX6 463 aaPredicted RBP5.99□□□□□ -1.45
VRK1-206ENST00000557222 SMCO3A2RU48 225 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 PMS2P5A8MQ11 134 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 B5MCH6 92 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 RLN2P04090 185 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 HOXB5P09067 269 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 HTN1P15515 57 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 ANXA7P20073 488 aaKnown RBP5.98□□□□□ -1.45
VRK1-206ENST00000557222 TAS2R30P59541 319 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 POLR2GP62487 172 aaKnown RBP eCLIP5.98□□□□□ -1.45
VRK1-206ENST00000557222 NHLH2Q02577 135 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 PPP1R1AQ13522 171 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 ESRGQ1W209 222 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 TMEM14EPQ6UXP3 125 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 TRIM63Q969Q1 353 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 GGACTQ9BVM4 153 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 ARL6Q9H0F7 186 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 ARV1Q9H2C2 271 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 PSENENQ9NZ42 101 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 PXMP4Q9Y6I8 212 aa5.98□□□□□ -1.45
VRK1-206ENST00000557222 SRRM2Q9UQ35 2752 aaKnown RBP5.97□□□□□ -1.45
VRK1-206ENST00000557222 SNURFLB1AK76 121 aa5.97□□□□□ -1.45
VRK1-206ENST00000557222 H3BP45 60 aa5.97□□□□□ -1.45
VRK1-206ENST00000557222 PATE2Q6UY27 113 aa5.97□□□□□ -1.45
VRK1-206ENST00000557222 ZNF546Q86UE3 836 aa5.97□□□□□ -1.45
VRK1-206ENST00000557222 BPIFA4PQ86YQ2 179 aa5.97□□□□□ -1.45
VRK1-206ENST00000557222 OR10P1Q8NGE3 313 aa5.97□□□□□ -1.45
VRK1-206ENST00000557222 UHRF2Q96PU4 802 aa5.97□□□□□ -1.45
VRK1-206ENST00000557222 PYGO2Q9BRQ0 406 aa5.97□□□□□ -1.45
VRK1-206ENST00000557222 KRTAP1-5Q9BYS1 174 aa5.97□□□□□ -1.45
VRK1-206ENST00000557222 MGAT4CQ9UBM8 478 aa5.97□□□□□ -1.45
VRK1-206ENST00000557222 GAGE12BA1L429 117 aa5.96□□□□□ -1.46
VRK1-206ENST00000557222 C9orf170A2RU37 121 aa5.96□□□□□ -1.46
VRK1-206ENST00000557222 GAGE12HA6NDE8 117 aa5.96□□□□□ -1.46
VRK1-206ENST00000557222 DIRC3C9JPN6 131 aa5.96□□□□□ -1.46
VRK1-206ENST00000557222 GOSR2O14653 212 aa5.96□□□□□ -1.46
VRK1-206ENST00000557222 TSC22D2O75157 780 aa5.96□□□□□ -1.46
VRK1-206ENST00000557222 LEPP41159 167 aa5.96□□□□□ -1.46
VRK1-206ENST00000557222 GUK1Q16774 197 aa5.96□□□□□ -1.46
VRK1-206ENST00000557222 PYDC2Q56P42 97 aa5.96□□□□□ -1.46
VRK1-206ENST00000557222 GFI1BQ5VTD9 330 aa5.96□□□□□ -1.46
VRK1-206ENST00000557222 LINC00305Q7Z4B0 112 aa5.96□□□□□ -1.46
VRK1-206ENST00000557222 MCFD2Q8NI22 146 aa5.96□□□□□ -1.46
VRK1-206ENST00000557222 LINC00467Q9BRT7 94 aa5.96□□□□□ -1.46
VRK1-206ENST00000557222 PTTG2Q9NZH5 202 aa5.96□□□□□ -1.46
VRK1-206ENST00000557222 MYCBP2O75592 4640 aa5.95□□□□□ -1.46
VRK1-206ENST00000557222 A0A0J9YY99 117 aa5.95□□□□□ -1.46
VRK1-206ENST00000557222 EPM2AB3EWF7 344 aa5.95□□□□□ -1.46
VRK1-206ENST00000557222 K7EP13 123 aa5.95□□□□□ -1.46
VRK1-206ENST00000557222 NOL3O60936 208 aaKnown RBP5.95□□□□□ -1.46
VRK1-206ENST00000557222 ZNF253O75346 499 aa5.95□□□□□ -1.46
VRK1-206ENST00000557222 GAGE7O76087 117 aa5.95□□□□□ -1.46
VRK1-206ENST00000557222 SLC25A5P05141 298 aaKnown RBP5.95□□□□□ -1.46
VRK1-206ENST00000557222 GAGE12FP0CL80 117 aa5.95□□□□□ -1.46
VRK1-206ENST00000557222 GAGE12GP0CL81 117 aa5.95□□□□□ -1.46
VRK1-206ENST00000557222 GAGE12IP0CL82 117 aa5.95□□□□□ -1.46
VRK1-206ENST00000557222 Q6ZRN7 208 aaPredicted RBP5.95□□□□□ -1.46
VRK1-206ENST00000557222 ZNF680Q8NEM1 530 aa5.95□□□□□ -1.46
VRK1-206ENST00000557222 MRPL53Q96EL3 112 aaKnown RBP5.95□□□□□ -1.46
VRK1-206ENST00000557222 SAT2Q96F10 170 aaPredicted RBP5.95□□□□□ -1.46
VRK1-206ENST00000557222 ZNF586Q9NXT0 402 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms