RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 H3BQ15 152 aa8.57□□□□□ -1.04
SYNE2-226ENST00000557084 PTTG1O95997 202 aa8.57□□□□□ -1.04
SYNE2-226ENST00000557084 IFNA5P01569 189 aa8.57□□□□□ -1.04
SYNE2-226ENST00000557084 IGLC2P0DOY2 106 aa8.57□□□□□ -1.04
SYNE2-226ENST00000557084 PRB4P10163 310 aaPredicted RBP8.57□□□□□ -1.04
SYNE2-226ENST00000557084 TSPOP30536 169 aa8.57□□□□□ -1.04
SYNE2-226ENST00000557084 C12orf74Q32Q52 190 aa8.57□□□□□ -1.04
SYNE2-226ENST00000557084 BAP18Q8IXM2 172 aa8.57□□□□□ -1.04
SYNE2-226ENST00000557084 C1orf158Q8N1D5 194 aa8.57□□□□□ -1.04
SYNE2-226ENST00000557084 SCGB1C1Q8TD33 95 aa8.57□□□□□ -1.04
SYNE2-226ENST00000557084 LINC01587Q99440 93 aa8.57□□□□□ -1.04
SYNE2-226ENST00000557084 SLC17A3O00476 420 aa8.56□□□□□ -1.04
SYNE2-226ENST00000557084 HTN1P15515 57 aa8.56□□□□□ -1.04
SYNE2-226ENST00000557084 RPL12P30050 165 aaKnown RBP8.56□□□□□ -1.04
SYNE2-226ENST00000557084 GCSAMLQ5JQS6 135 aa8.56□□□□□ -1.04
SYNE2-226ENST00000557084 FAM222AQ5U5X8 452 aa8.56□□□□□ -1.04
SYNE2-226ENST00000557084 LGALS9CQ6DKI2 356 aa8.56□□□□□ -1.04
SYNE2-226ENST00000557084 BLNKQ8WV28 456 aa8.56□□□□□ -1.04
SYNE2-226ENST00000557084 ATP5SQ99766 215 aa8.56□□□□□ -1.04
SYNE2-226ENST00000557084 TMEM14CQ9P0S9 112 aa8.56□□□□□ -1.04
SYNE2-226ENST00000557084 YTHDF2Q9Y5A9 579 aaKnown RBP8.56□□□□□ -1.04
SYNE2-226ENST00000557084 IGHV4-4A0A075B6R2 117 aa8.55□□□□□ -1.04
SYNE2-226ENST00000557084 ZNF705GA8MUZ8 300 aaPredicted RBP8.55□□□□□ -1.04
SYNE2-226ENST00000557084 HIST1H1EP10412 219 aaKnown RBP8.55□□□□□ -1.04
SYNE2-226ENST00000557084 CDKN1BP46527 198 aa8.55□□□□□ -1.04
SYNE2-226ENST00000557084 TMEM256Q8N2U0 113 aa8.55□□□□□ -1.04
SYNE2-226ENST00000557084 RPP25LQ8N5L8 163 aaKnown RBP8.55□□□□□ -1.04
SYNE2-226ENST00000557084 SAT2Q96F10 170 aaPredicted RBP8.55□□□□□ -1.04
SYNE2-226ENST00000557084 NIPSNAP3BQ9BS92 247 aa8.55□□□□□ -1.04
SYNE2-226ENST00000557084 RNF126Q9BV68 326 aa8.55□□□□□ -1.04
SYNE2-226ENST00000557084 SMIM3Q9BZL3 60 aa8.55□□□□□ -1.04
SYNE2-226ENST00000557084 WDR61Q9GZS3 305 aaKnown RBP8.55□□□□□ -1.04
SYNE2-226ENST00000557084 MED28Q9H204 178 aa8.55□□□□□ -1.04
SYNE2-226ENST00000557084 AAMDCQ9H7C9 122 aa8.55□□□□□ -1.04
SYNE2-226ENST00000557084 ZNF586Q9NXT0 402 aa8.55□□□□□ -1.04
SYNE2-226ENST00000557084 MBD2Q9UBB5 411 aa8.55□□□□□ -1.04
SYNE2-226ENST00000557084 DKK2Q9UBU2 259 aa8.55□□□□□ -1.04
SYNE2-226ENST00000557084 HSPB11Q9Y547 144 aa8.55□□□□□ -1.04
SYNE2-226ENST00000557084 ALG5Q9Y673 324 aa8.55□□□□□ -1.04
SYNE2-226ENST00000557084 TRBV19A0A075B6N1 114 aa8.54□□□□□ -1.04
SYNE2-226ENST00000557084 CRXO43186 299 aaPredicted RBP8.54□□□□□ -1.04
SYNE2-226ENST00000557084 ZNF253O75346 499 aa8.54□□□□□ -1.04
SYNE2-226ENST00000557084 PYYP10082 97 aa8.54□□□□□ -1.04
SYNE2-226ENST00000557084 HTN3P15516 51 aa8.54□□□□□ -1.04
SYNE2-226ENST00000557084 DAD1P61803 113 aa8.54□□□□□ -1.04
SYNE2-226ENST00000557084 NDUFAF3Q9BU61 184 aa8.54□□□□□ -1.04
SYNE2-226ENST00000557084 PRAC2D3DTV9 90 aa8.53□□□□□ -1.04
SYNE2-226ENST00000557084 LEPP41159 167 aa8.53□□□□□ -1.04
SYNE2-226ENST00000557084 TAS2R60P59551 318 aa8.53□□□□□ -1.04
SYNE2-226ENST00000557084 PDE6HQ13956 83 aa8.53□□□□□ -1.04
SYNE2-226ENST00000557084 FFAR4Q5NUL3 377 aa8.53□□□□□ -1.04
SYNE2-226ENST00000557084 MIR17HGQ75NE6 70 aa8.53□□□□□ -1.04
SYNE2-226ENST00000557084 MRPL32Q9BYC8 188 aaKnown RBP8.53□□□□□ -1.04
SYNE2-226ENST00000557084 OR51M1Q9H341 326 aa8.53□□□□□ -1.04
SYNE2-226ENST00000557084 APLNQ9ULZ1 77 aa8.53□□□□□ -1.04
SYNE2-226ENST00000557084 PRELID1Q9Y255 219 aa8.53□□□□□ -1.04
SYNE2-226ENST00000557084 J3KRW8 73 aa8.52□□□□□ -1.05
SYNE2-226ENST00000557084 OR7C2O60412 319 aa8.52□□□□□ -1.05
SYNE2-226ENST00000557084 NBEAP1P0C6P0 100 aa8.52□□□□□ -1.05
SYNE2-226ENST00000557084 CCDC28AQ8IWP9 274 aa8.52□□□□□ -1.05
SYNE2-226ENST00000557084 MRPL53Q96EL3 112 aaKnown RBP8.52□□□□□ -1.05
SYNE2-226ENST00000557084 PAXXQ9BUH6 204 aa8.52□□□□□ -1.05
SYNE2-226ENST00000557084 SLC25A2Q9BXI2 301 aa8.52□□□□□ -1.05
SYNE2-226ENST00000557084 FUT9Q9Y231 359 aa8.52□□□□□ -1.05
SYNE2-226ENST00000557084 EPPK1P58107 5090 aaKnown RBP8.51□□□□□ -1.05
SYNE2-226ENST00000557084 LYRM9A8MSI8 78 aa8.51□□□□□ -1.05
SYNE2-226ENST00000557084 H7BYZ3 331 aa8.51□□□□□ -1.05
SYNE2-226ENST00000557084 M0R3E3 92 aa8.51□□□□□ -1.05
SYNE2-226ENST00000557084 PRM2P04554 102 aa8.51□□□□□ -1.05
SYNE2-226ENST00000557084 OR10J4P0C629 311 aa8.51□□□□□ -1.05
SYNE2-226ENST00000557084 DEFB130BP0DP73 79 aa8.51□□□□□ -1.05
SYNE2-226ENST00000557084 DEFB130AP0DP74 79 aa8.51□□□□□ -1.05
SYNE2-226ENST00000557084 TAS2R45P59539 299 aa8.51□□□□□ -1.05
SYNE2-226ENST00000557084 OXA1LQ15070 435 aa8.51□□□□□ -1.05
SYNE2-226ENST00000557084 EXOC3-AS1Q8N2X6 119 aa8.51□□□□□ -1.05
SYNE2-226ENST00000557084 RNF141Q8WVD5 230 aa8.51□□□□□ -1.05
SYNE2-226ENST00000557084 C16orf74Q96GX8 76 aa8.51□□□□□ -1.05
SYNE2-226ENST00000557084 C20orf144Q9BQM9 153 aa8.51□□□□□ -1.05
SYNE2-226ENST00000557084 PARD6GQ9BYG4 376 aaPredicted RBP8.51□□□□□ -1.05
SYNE2-226ENST00000557084 NPIPB6E9PJ23 425 aa8.5□□□□□ -1.05
SYNE2-226ENST00000557084 NDUFB4O95168 129 aa8.5□□□□□ -1.05
SYNE2-226ENST00000557084 CT45A10P0DMU9 189 aa8.5□□□□□ -1.05
SYNE2-226ENST00000557084 AZU1P20160 251 aa8.5□□□□□ -1.05
SYNE2-226ENST00000557084 CSN1S1P47710 185 aa8.5□□□□□ -1.05
SYNE2-226ENST00000557084 UBE2L3P68036 154 aaKnown RBP8.5□□□□□ -1.05
SYNE2-226ENST00000557084 ICAM4Q14773 271 aa8.5□□□□□ -1.05
SYNE2-226ENST00000557084 FCN2Q15485 313 aa8.5□□□□□ -1.05
SYNE2-226ENST00000557084 KHDC3LQ587J8 217 aa8.5□□□□□ -1.05
SYNE2-226ENST00000557084 TMEM78Q5T7P6 136 aa8.5□□□□□ -1.05
SYNE2-226ENST00000557084 GFI1BQ5VTD9 330 aa8.5□□□□□ -1.05
SYNE2-226ENST00000557084 FAM122CQ6P4D5 195 aa8.5□□□□□ -1.05
SYNE2-226ENST00000557084 ZNF493Q6ZR52 646 aa8.5□□□□□ -1.05
SYNE2-226ENST00000557084 FAM210BQ96KR6 192 aa8.5□□□□□ -1.05
SYNE2-226ENST00000557084 FAM167A-AS1Q96KT0 104 aa8.5□□□□□ -1.05
SYNE2-226ENST00000557084 ODF3Q96PU9 254 aa8.5□□□□□ -1.05
SYNE2-226ENST00000557084 TRAV12-3A0A0B4J271 114 aa8.49□□□□□ -1.05
SYNE2-226ENST00000557084 A0A1W2PPV4 95 aa8.49□□□□□ -1.05
SYNE2-226ENST00000557084 P0DMU3 169 aa8.49□□□□□ -1.05
SYNE2-226ENST00000557084 FAM231AP0DMU4 169 aa8.49□□□□□ -1.05
SYNE2-226ENST00000557084 FAM231CP0DMU5 169 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms