RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 OR2G3Q8NGZ4 309 aa7.73□□□□□ -1.17
LINC00239-201ENST00000556973 FXYD5Q96DB9 178 aa7.73□□□□□ -1.17
LINC00239-201ENST00000556973 GNPNAT1Q96EK6 184 aaPredicted RBP7.73□□□□□ -1.17
LINC00239-201ENST00000556973 IGF2BP2-AS1Q96M15 143 aa7.73□□□□□ -1.17
LINC00239-201ENST00000556973 GOLT1BQ9Y3E0 138 aa7.73□□□□□ -1.17
LINC00239-201ENST00000556973 IGHV3OR16-12A0A075B7B8 117 aa7.72□□□□□ -1.17
LINC00239-201ENST00000556973 PRAC2D3DTV9 90 aa7.72□□□□□ -1.17
LINC00239-201ENST00000556973 ARPC5O15511 151 aa7.72□□□□□ -1.17
LINC00239-201ENST00000556973 JTBO76095 146 aa7.72□□□□□ -1.17
LINC00239-201ENST00000556973 ATP6V0CP27449 155 aa7.72□□□□□ -1.17
LINC00239-201ENST00000556973 SPINK13Q1W4C9 94 aa7.72□□□□□ -1.17
LINC00239-201ENST00000556973 RPL7L1Q6DKI1 246 aaKnown RBP7.72□□□□□ -1.17
LINC00239-201ENST00000556973 C1orf158Q8N1D5 194 aa7.72□□□□□ -1.17
LINC00239-201ENST00000556973 LYPD1Q8N2G4 141 aa7.72□□□□□ -1.17
LINC00239-201ENST00000556973 TMEM189A5PLL7 270 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 CXorf65A6NEN9 183 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 HMSDA8MTL9 139 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 BOLA2-SMG1P6H3BVE0 249 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 M0R2Z0 102 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 CRXO43186 299 aaPredicted RBP7.71□□□□□ -1.18
LINC00239-201ENST00000556973 OR10J4P0C629 311 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 TSPOP30536 169 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 CDKN1BP46527 198 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 ICAM4Q14773 271 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 FAM122CQ6P4D5 195 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 PQLC2Q6ZP29 291 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 EXOC3-AS1Q8N2X6 119 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 ZNF503Q96F45 646 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 LINC00477Q96M19 166 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 TMEM208Q9BTX3 173 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 STAB2Q8WWQ8 2551 aa7.71□□□□□ -1.18
LINC00239-201ENST00000556973 DNAH7Q8WXX0 4024 aa7.7□□□□□ -1.18
LINC00239-201ENST00000556973 NUPR2A6NF83 97 aa7.7□□□□□ -1.18
LINC00239-201ENST00000556973 NPIPB6E9PJ23 425 aa7.7□□□□□ -1.18
LINC00239-201ENST00000556973 SMLR1H3BR10 107 aa7.7□□□□□ -1.18
LINC00239-201ENST00000556973 M0R3E3 92 aa7.7□□□□□ -1.18
LINC00239-201ENST00000556973 INSP01308 110 aa7.7□□□□□ -1.18
LINC00239-201ENST00000556973 PRB4P10163 310 aaPredicted RBP7.7□□□□□ -1.18
LINC00239-201ENST00000556973 NANOS2P60321 138 aaKnown RBP7.7□□□□□ -1.18
LINC00239-201ENST00000556973 RAB2AP61019 212 aa7.7□□□□□ -1.18
LINC00239-201ENST00000556973 RANP62826 216 aaKnown RBP7.7□□□□□ -1.18
LINC00239-201ENST00000556973 UBE2L3P68036 154 aaKnown RBP7.7□□□□□ -1.18
LINC00239-201ENST00000556973 PMS2P11Q13670 270 aa7.7□□□□□ -1.18
LINC00239-201ENST00000556973 CEMP1Q6PRD7 247 aaPredicted RBP7.7□□□□□ -1.18
LINC00239-201ENST00000556973 TMEM256Q8N2U0 113 aa7.7□□□□□ -1.18
LINC00239-201ENST00000556973 RPP25LQ8N5L8 163 aaKnown RBP7.7□□□□□ -1.18
LINC00239-201ENST00000556973 ODF3Q96PU9 254 aa7.7□□□□□ -1.18
LINC00239-201ENST00000556973 C20orf144Q9BQM9 153 aa7.7□□□□□ -1.18
LINC00239-201ENST00000556973 SH3BGRL3Q9H299 93 aa7.7□□□□□ -1.18
LINC00239-201ENST00000556973 TRAV12-2A0A075B6T6 113 aa7.69□□□□□ -1.18
LINC00239-201ENST00000556973 A0A0D9SG52 128 aa7.69□□□□□ -1.18
LINC00239-201ENST00000556973 HBE1P02100 147 aa7.69□□□□□ -1.18
LINC00239-201ENST00000556973 CT45A10P0DMU9 189 aa7.69□□□□□ -1.18
LINC00239-201ENST00000556973 LEPP41159 167 aa7.69□□□□□ -1.18
LINC00239-201ENST00000556973 CSN1S1P47710 185 aa7.69□□□□□ -1.18
LINC00239-201ENST00000556973 CDC34P49427 236 aaPredicted RBP7.69□□□□□ -1.18
LINC00239-201ENST00000556973 ZNF345Q14585 488 aa7.69□□□□□ -1.18
LINC00239-201ENST00000556973 RRN3P1Q2M238 152 aa7.69□□□□□ -1.18
LINC00239-201ENST00000556973 Q6ZNX1 250 aa7.69□□□□□ -1.18
LINC00239-201ENST00000556973 C9orf47Q6ZRZ4 202 aa7.69□□□□□ -1.18
LINC00239-201ENST00000556973 KCNRGQ8N5I3 272 aa7.69□□□□□ -1.18
LINC00239-201ENST00000556973 PHLDA1Q8WV24 401 aaPredicted RBP7.69□□□□□ -1.18
LINC00239-201ENST00000556973 ACTR3CQ9C0K3 210 aaPredicted RBP7.69□□□□□ -1.18
LINC00239-201ENST00000556973 CYTL1Q9NRR1 136 aa7.69□□□□□ -1.18
LINC00239-201ENST00000556973 KLK5Q9Y337 293 aaPredicted RBP7.69□□□□□ -1.18
LINC00239-201ENST00000556973 CSMD3Q7Z407 3707 aa7.68□□□□□ -1.18
LINC00239-201ENST00000556973 RBAKDNA6NC62 111 aa7.68□□□□□ -1.18
LINC00239-201ENST00000556973 EIF3GO75821 320 aaKnown RBP eCLIP7.68□□□□□ -1.18
LINC00239-201ENST00000556973 STAG3L2P0CL84 134 aa7.68□□□□□ -1.18
LINC00239-201ENST00000556973 STAG3L3P0CL85 134 aa7.68□□□□□ -1.18
LINC00239-201ENST00000556973 ERCC8Q13216 396 aa7.68□□□□□ -1.18
LINC00239-201ENST00000556973 FAM74A1Q5RGS3 127 aa7.68□□□□□ -1.18
LINC00239-201ENST00000556973 BAP18Q8IXM2 172 aa7.68□□□□□ -1.18
LINC00239-201ENST00000556973 OR11H4Q8NGC9 324 aa7.68□□□□□ -1.18
LINC00239-201ENST00000556973 RXFP4Q8TDU9 374 aa7.68□□□□□ -1.18
LINC00239-201ENST00000556973 RAB24Q969Q5 203 aa7.68□□□□□ -1.18
LINC00239-201ENST00000556973 PHYHIPLQ96FC7 376 aa7.68□□□□□ -1.18
LINC00239-201ENST00000556973 LINC01587Q99440 93 aa7.68□□□□□ -1.18
LINC00239-201ENST00000556973 ARPC5LQ9BPX5 153 aa7.68□□□□□ -1.18
LINC00239-201ENST00000556973 AGPAT4-IT1Q9H0P7 198 aa7.68□□□□□ -1.18
LINC00239-201ENST00000556973 Q9H3A6 140 aa7.68□□□□□ -1.18
LINC00239-201ENST00000556973 TEX48A0A1B0GUV7 120 aa7.67□□□□□ -1.18
LINC00239-201ENST00000556973 LOC102723971A0A1B0GUV8 181 aa7.67□□□□□ -1.18
LINC00239-201ENST00000556973 PGPA6NDG6 321 aa7.67□□□□□ -1.18
LINC00239-201ENST00000556973 C11orf94C9JXX5 98 aa7.67□□□□□ -1.18
LINC00239-201ENST00000556973 HMGB3O15347 200 aaKnown RBP7.67□□□□□ -1.18
LINC00239-201ENST00000556973 CXorf1O96002 111 aa7.67□□□□□ -1.18
LINC00239-201ENST00000556973 SLC25A5P05141 298 aaKnown RBP7.67□□□□□ -1.18
LINC00239-201ENST00000556973 SPART-AS1P0CW21 52 aa7.67□□□□□ -1.18
LINC00239-201ENST00000556973 ARL14EPLP0DKL9 152 aa7.67□□□□□ -1.18
LINC00239-201ENST00000556973 EMP1P54849 157 aa7.67□□□□□ -1.18
LINC00239-201ENST00000556973 TAS2R60P59551 318 aa7.67□□□□□ -1.18
LINC00239-201ENST00000556973 TMEM78Q5T7P6 136 aa7.67□□□□□ -1.18
LINC00239-201ENST00000556973 ARL6IP6Q8N6S5 226 aa7.67□□□□□ -1.18
LINC00239-201ENST00000556973 SUN5Q8TC36 379 aa7.67□□□□□ -1.18
LINC00239-201ENST00000556973 FAM19A4Q96LR4 140 aa7.67□□□□□ -1.18
LINC00239-201ENST00000556973 OTORQ9NRC9 128 aa7.67□□□□□ -1.18
LINC00239-201ENST00000556973 ZNF705GA8MUZ8 300 aaPredicted RBP7.66□□□□□ -1.18
LINC00239-201ENST00000556973 DIRC3C9JPN6 131 aa7.66□□□□□ -1.18
LINC00239-201ENST00000556973 H7BYZ3 331 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms