RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 C16orf92Q96LL3 132 aa17.91■□□□□ 0.46
SIX4-203ENST00000556952 SOCS3O14543 225 aa17.91■□□□□ 0.46
SIX4-203ENST00000556952 PF4P02776 101 aa17.91■□□□□ 0.46
SIX4-203ENST00000556952 CSN1S1P47710 185 aa17.91■□□□□ 0.46
SIX4-203ENST00000556952 GNG5P63218 68 aa17.91■□□□□ 0.46
SIX4-203ENST00000556952 DYNLRB2Q8TF09 96 aa17.91■□□□□ 0.46
SIX4-203ENST00000556952 MRPL53Q96EL3 112 aaKnown RBP17.91■□□□□ 0.46
SIX4-203ENST00000556952 DERL1Q9BUN8 251 aa17.91■□□□□ 0.46
SIX4-203ENST00000556952 SERTM2A0A1B0GWG4 89 aa17.9■□□□□ 0.46
SIX4-203ENST00000556952 CNN1P51911 297 aaKnown RBP17.9■□□□□ 0.46
SIX4-203ENST00000556952 SVBPQ8N300 66 aa17.9■□□□□ 0.46
SIX4-203ENST00000556952 TRAV8-2A0A0B4J237 113 aa17.89■□□□□ 0.45
SIX4-203ENST00000556952 M0R3E3 92 aa17.89■□□□□ 0.45
SIX4-203ENST00000556952 ISLRO14498 428 aa17.89■□□□□ 0.45
SIX4-203ENST00000556952 RPL35P42766 123 aaKnown RBP17.89■□□□□ 0.45
SIX4-203ENST00000556952 PRR31Q5SQ13 230 aa17.89■□□□□ 0.45
SIX4-203ENST00000556952 RPH3ALQ9UNE2 315 aa17.89■□□□□ 0.45
SIX4-203ENST00000556952 MGAM2Q2M2H8 2515 aa17.89■□□□□ 0.45
SIX4-203ENST00000556952 DCANP1Q8TF63 244 aa17.88■□□□□ 0.45
SIX4-203ENST00000556952 NAT8Q9UHE5 227 aa17.88■□□□□ 0.45
SIX4-203ENST00000556952 NBEAL1Q6ZS30 2694 aa17.88■□□□□ 0.45
SIX4-203ENST00000556952 IGKV3-7A0A075B6H7 116 aa17.87■□□□□ 0.45
SIX4-203ENST00000556952 C9JCJ5 164 aa17.87■□□□□ 0.45
SIX4-203ENST00000556952 DIRC3C9JPN6 131 aa17.87■□□□□ 0.45
SIX4-203ENST00000556952 K7EQM0 130 aa17.87■□□□□ 0.45
SIX4-203ENST00000556952 S100A9P06702 114 aaKnown RBP17.87■□□□□ 0.45
SIX4-203ENST00000556952 GUCA2BQ16661 112 aa17.87■□□□□ 0.45
SIX4-203ENST00000556952 MS4A6AQ9H2W1 248 aa17.87■□□□□ 0.45
SIX4-203ENST00000556952 KLF12Q9Y4X4 402 aa17.87■□□□□ 0.45
SIX4-203ENST00000556952 TAS2R60P59551 318 aa17.87■□□□□ 0.45
SIX4-203ENST00000556952 PAFAH1B2P68402 229 aa17.87■□□□□ 0.45
SIX4-203ENST00000556952 IGFL4Q6B9Z1 124 aa17.87■□□□□ 0.45
SIX4-203ENST00000556952 FMC1Q96HJ9 113 aa17.87■□□□□ 0.45
SIX4-203ENST00000556952 HLA-DMBP28068 263 aa17.86■□□□□ 0.45
SIX4-203ENST00000556952 ID1P41134 155 aa17.86■□□□□ 0.45
SIX4-203ENST00000556952 UBE2G1P62253 170 aa17.86■□□□□ 0.45
SIX4-203ENST00000556952 PNRC1Q12796 327 aaPredicted RBP17.86■□□□□ 0.45
SIX4-203ENST00000556952 PSG3Q16557 428 aa17.86■□□□□ 0.45
SIX4-203ENST00000556952 TMEM183BQ1AE95 376 aa17.86■□□□□ 0.45
SIX4-203ENST00000556952 TMEM241Q24JQ0 296 aa17.86■□□□□ 0.45
SIX4-203ENST00000556952 LCN12Q6JVE5 192 aa17.86■□□□□ 0.45
SIX4-203ENST00000556952 GOLT1AQ6ZVE7 132 aa17.86■□□□□ 0.45
SIX4-203ENST00000556952 RNF182Q8N6D2 247 aa17.86■□□□□ 0.45
SIX4-203ENST00000556952 LINC00482Q8N8I6 264 aa17.86■□□□□ 0.45
SIX4-203ENST00000556952 TVP23CQ96ET8 276 aa17.86■□□□□ 0.45
SIX4-203ENST00000556952 SELENOKQ9Y6D0 94 aa17.86■□□□□ 0.45
SIX4-203ENST00000556952 TRAV2A0A0B4J234 112 aa17.85■□□□□ 0.45
SIX4-203ENST00000556952 DNASE2O00115 360 aaPredicted RBP17.85■□□□□ 0.45
SIX4-203ENST00000556952 DEFB114Q30KQ6 69 aa17.85■□□□□ 0.45
SIX4-203ENST00000556952 RBPMS2Q6ZRY4 209 aaKnown RBP17.85■□□□□ 0.45
SIX4-203ENST00000556952 TMEM75Q8N9X5 138 aa17.85■□□□□ 0.45
SIX4-203ENST00000556952 SDF2L1Q9HCN8 221 aa17.85■□□□□ 0.45
SIX4-203ENST00000556952 TSPAN4O14817 238 aa17.84■□□□□ 0.45
SIX4-203ENST00000556952 SNAPINO95295 136 aa17.84■□□□□ 0.45
SIX4-203ENST00000556952 GBGT1Q8N5D6 347 aa17.84■□□□□ 0.45
SIX4-203ENST00000556952 LINC00479Q96M42 142 aa17.84■□□□□ 0.45
SIX4-203ENST00000556952 TRBV20OR9-2A0A075B6H5 130 aa17.83■□□□□ 0.45
SIX4-203ENST00000556952 TRAV25A0A0B4J276 109 aa17.83■□□□□ 0.45
SIX4-203ENST00000556952 FBLL1A6NHQ2 334 aaKnown RBP17.83■□□□□ 0.45
SIX4-203ENST00000556952 K7EQG2 157 aa17.83■□□□□ 0.45
SIX4-203ENST00000556952 GNG4P50150 75 aa17.83■□□□□ 0.45
SIX4-203ENST00000556952 CENPWQ5EE01 88 aa17.83■□□□□ 0.45
SIX4-203ENST00000556952 IGF2BP2-AS1Q96M15 143 aa17.83■□□□□ 0.45
SIX4-203ENST00000556952 LY96Q9Y6Y9 160 aa17.83■□□□□ 0.45
SIX4-203ENST00000556952 TRBV6-1A0A0K0K1D8 114 aa17.83■□□□□ 0.44
SIX4-203ENST00000556952 TMEM61Q8N0U2 210 aa17.83■□□□□ 0.44
SIX4-203ENST00000556952 TRAV34A0A0B4J273 112 aa17.82■□□□□ 0.44
SIX4-203ENST00000556952 RBAKDNA6NC62 111 aa17.82■□□□□ 0.44
SIX4-203ENST00000556952 ZNF705FA8MVS1 300 aaPredicted RBP17.81■□□□□ 0.44
SIX4-203ENST00000556952 SAP30O75446 220 aa17.81■□□□□ 0.44
SIX4-203ENST00000556952 SNRPD3P62318 126 aaKnown RBP17.81■□□□□ 0.44
SIX4-203ENST00000556952 CD300EQ496F6 205 aaPredicted RBP17.81■□□□□ 0.44
SIX4-203ENST00000556952 WFDC3Q8IUB2 231 aa17.81■□□□□ 0.44
SIX4-203ENST00000556952 CLRN3Q8NCR9 226 aa17.81■□□□□ 0.44
SIX4-203ENST00000556952 ZNF738Q8NE65 137 aa17.81■□□□□ 0.44
SIX4-203ENST00000556952 SMIM12Q96EX1 92 aa17.81■□□□□ 0.44
SIX4-203ENST00000556952 C20orf173Q96LM9 149 aa17.81■□□□□ 0.44
SIX4-203ENST00000556952 M0R036 132 aa17.8■□□□□ 0.44
SIX4-203ENST00000556952 RPL23P62829 140 aaKnown RBP17.8■□□□□ 0.44
SIX4-203ENST00000556952 Q86TA4 180 aa17.8■□□□□ 0.44
SIX4-203ENST00000556952 LINC01551Q86U37 167 aa17.8■□□□□ 0.44
SIX4-203ENST00000556952 SPAG8Q99932 426 aaPredicted RBP17.8■□□□□ 0.44
SIX4-203ENST00000556952 IGKV2-40A0A087WW87 121 aaPredicted RBP17.79■□□□□ 0.44
SIX4-203ENST00000556952 IGKV2D-40P01614 121 aaPredicted RBP17.79■□□□□ 0.44
SIX4-203ENST00000556952 IGLV2-11P01706 119 aa17.79■□□□□ 0.44
SIX4-203ENST00000556952 TFPI2P48307 235 aa17.79■□□□□ 0.44
SIX4-203ENST00000556952 FLI1Q01543 452 aaPredicted RBP17.79■□□□□ 0.44
SIX4-203ENST00000556952 OR2K2Q8NGT1 345 aa17.79■□□□□ 0.44
SIX4-203ENST00000556952 FBN3Q75N90 2809 aa17.79■□□□□ 0.44
SIX4-203ENST00000556952 TRAV8-1A0A0A6YYK1 113 aa17.79■□□□□ 0.44
SIX4-203ENST00000556952 LTAP01374 205 aa17.79■□□□□ 0.44
SIX4-203ENST00000556952 RHEBQ15382 184 aa17.79■□□□□ 0.44
SIX4-203ENST00000556952 ADIRFQ15847 76 aa17.79■□□□□ 0.44
SIX4-203ENST00000556952 B4DEV8 164 aa17.78■□□□□ 0.44
SIX4-203ENST00000556952 PRAC2D3DTV9 90 aa17.78■□□□□ 0.44
SIX4-203ENST00000556952 BAGE2Q86Y30 109 aa17.78■□□□□ 0.44
SIX4-203ENST00000556952 SGK494Q96LW2 274 aa17.78■□□□□ 0.44
SIX4-203ENST00000556952 PSG8Q9UQ74 426 aa17.78■□□□□ 0.44
SIX4-203ENST00000556952 PGPEP1LA6NFU8 196 aa17.77■□□□□ 0.44
SIX4-203ENST00000556952 IGLV1-51P01701 117 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms