RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 MAP1LC3BQ9GZQ8 125 aa12.92□□□□□ -0.34
PSEN1-218ENST00000556864 ZNF726P1Q15940 193 aa12.91□□□□□ -0.34
PSEN1-218ENST00000556864 FAM74A1Q5RGS3 127 aa12.91□□□□□ -0.34
PSEN1-218ENST00000556864 SBSPONQ8IVN8 264 aa12.91□□□□□ -0.34
PSEN1-218ENST00000556864 CLUHP3Q96NS8 147 aa12.91□□□□□ -0.34
PSEN1-218ENST00000556864 ASCL2Q99929 193 aa12.91□□□□□ -0.34
PSEN1-218ENST00000556864 SPATA25Q9BR10 227 aa12.91□□□□□ -0.34
PSEN1-218ENST00000556864 ZMAT4Q9H898 229 aa12.91□□□□□ -0.34
PSEN1-218ENST00000556864 F6UB75 175 aa12.9□□□□□ -0.34
PSEN1-218ENST00000556864 HIST1H1AQ02539 215 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-218ENST00000556864 ICAM4Q14773 271 aa12.9□□□□□ -0.34
PSEN1-218ENST00000556864 SSX7Q7RTT5 188 aa12.9□□□□□ -0.34
PSEN1-218ENST00000556864 OR4B1Q8NGF8 309 aa12.9□□□□□ -0.34
PSEN1-218ENST00000556864 OR8A1Q8NGG7 326 aa12.9□□□□□ -0.34
PSEN1-218ENST00000556864 OR10J6PQ8NGY7 276 aa12.9□□□□□ -0.34
PSEN1-218ENST00000556864 CSTL1Q9H114 145 aa12.9□□□□□ -0.34
PSEN1-218ENST00000556864 CA1P00915 261 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-218ENST00000556864 CSN1S1P47710 185 aa12.89□□□□□ -0.35
PSEN1-218ENST00000556864 DEFB1P60022 68 aa12.89□□□□□ -0.35
PSEN1-218ENST00000556864 GDF5OSQ5U4N7 250 aa12.89□□□□□ -0.35
PSEN1-218ENST00000556864 C1QTNF4Q9BXJ3 329 aa12.89□□□□□ -0.35
PSEN1-218ENST00000556864 Q9H3A6 140 aa12.89□□□□□ -0.35
PSEN1-218ENST00000556864 OTORQ9NRC9 128 aa12.89□□□□□ -0.35
PSEN1-218ENST00000556864 CNN1P51911 297 aaKnown RBP12.88□□□□□ -0.35
PSEN1-218ENST00000556864 RANP62826 216 aaKnown RBP12.88□□□□□ -0.35
PSEN1-218ENST00000556864 Q6ZWC4 215 aa12.88□□□□□ -0.35
PSEN1-218ENST00000556864 EXOC3-AS1Q8N2X6 119 aa12.88□□□□□ -0.35
PSEN1-218ENST00000556864 CMTM2Q8TAZ6 248 aa12.88□□□□□ -0.35
PSEN1-218ENST00000556864 SUN5Q8TC36 379 aa12.88□□□□□ -0.35
PSEN1-218ENST00000556864 TM2D3Q9BRN9 247 aa12.88□□□□□ -0.35
PSEN1-218ENST00000556864 A8MTW9 85 aa12.87□□□□□ -0.35
PSEN1-218ENST00000556864 M0R3E3 92 aa12.87□□□□□ -0.35
PSEN1-218ENST00000556864 IGKV3-20P01619 116 aa12.87□□□□□ -0.35
PSEN1-218ENST00000556864 AMBPP02760 352 aa12.87□□□□□ -0.35
PSEN1-218ENST00000556864 SULT1A2P50226 295 aa12.87□□□□□ -0.35
PSEN1-218ENST00000556864 RXFP4Q8TDU9 374 aa12.87□□□□□ -0.35
PSEN1-218ENST00000556864 PPP1R14DQ9NXH3 145 aa12.87□□□□□ -0.35
PSEN1-218ENST00000556864 ZNF705FA8MVS1 300 aaPredicted RBP12.86□□□□□ -0.35
PSEN1-218ENST00000556864 TEX46H3BTG2 121 aa12.86□□□□□ -0.35
PSEN1-218ENST00000556864 H2AFB1P0C5Y9 115 aa12.86□□□□□ -0.35
PSEN1-218ENST00000556864 FHITP49789 147 aa12.86□□□□□ -0.35
PSEN1-218ENST00000556864 FGF8P55075 233 aaPredicted RBP12.86□□□□□ -0.35
PSEN1-218ENST00000556864 SFT2D1Q8WV19 159 aa12.86□□□□□ -0.35
PSEN1-218ENST00000556864 TP53TG1Q9Y2A0 90 aa12.86□□□□□ -0.35
PSEN1-218ENST00000556864 BOLA2-SMG1P6H3BVE0 249 aa12.85□□□□□ -0.35
PSEN1-218ENST00000556864 DEFB135Q30KP9 77 aa12.85□□□□□ -0.35
PSEN1-218ENST00000556864 ARL6IP6Q8N6S5 226 aa12.85□□□□□ -0.35
PSEN1-218ENST00000556864 MBD3L1Q8WWY6 194 aa12.85□□□□□ -0.35
PSEN1-218ENST00000556864 RCHY1Q96PM5 261 aa12.85□□□□□ -0.35
PSEN1-218ENST00000556864 PLA2G2EQ9NZK7 142 aa12.85□□□□□ -0.35
PSEN1-218ENST00000556864 NPIPB6E9PJ23 425 aa12.84□□□□□ -0.35
PSEN1-218ENST00000556864 ZNF705DP0CH99 300 aaPredicted RBP12.84□□□□□ -0.35
PSEN1-218ENST00000556864 ZNF705BP0CI00 300 aaPredicted RBP12.84□□□□□ -0.35
PSEN1-218ENST00000556864 PPT1P50897 306 aa12.84□□□□□ -0.35
PSEN1-218ENST00000556864 ODF3Q96PU9 254 aa12.84□□□□□ -0.35
PSEN1-218ENST00000556864 BOLA1Q9Y3E2 137 aa12.84□□□□□ -0.35
PSEN1-218ENST00000556864 ARL2-SNX15V9GYD0 113 aa12.84□□□□□ -0.35
PSEN1-218ENST00000556864 PRKDCP78527 4128 aaKnown RBP12.84□□□□□ -0.35
PSEN1-218ENST00000556864 A0A1W2PRE2 83 aa12.83□□□□□ -0.36
PSEN1-218ENST00000556864 PGPA6NDG6 321 aa12.83□□□□□ -0.36
PSEN1-218ENST00000556864 PRAC2D3DTV9 90 aa12.83□□□□□ -0.36
PSEN1-218ENST00000556864 HBE1P02100 147 aa12.83□□□□□ -0.36
PSEN1-218ENST00000556864 TSPOP30536 169 aa12.83□□□□□ -0.36
PSEN1-218ENST00000556864 TMEM78Q5T7P6 136 aa12.83□□□□□ -0.36
PSEN1-218ENST00000556864 AMTNQ6UX39 209 aa12.83□□□□□ -0.36
PSEN1-218ENST00000556864 C5orf17Q8NAS9 161 aa12.83□□□□□ -0.36
PSEN1-218ENST00000556864 NKX6-2Q9C056 277 aaPredicted RBP12.83□□□□□ -0.36
PSEN1-218ENST00000556864 RETNQ9HD89 108 aa12.83□□□□□ -0.36
PSEN1-218ENST00000556864 IGKV2-40A0A087WW87 121 aaPredicted RBP12.82□□□□□ -0.36
PSEN1-218ENST00000556864 SERTM2A0A1B0GWG4 89 aa12.82□□□□□ -0.36
PSEN1-218ENST00000556864 RBAKDNA6NC62 111 aa12.82□□□□□ -0.36
PSEN1-218ENST00000556864 SPRY2O43597 315 aa12.82□□□□□ -0.36
PSEN1-218ENST00000556864 INSP01308 110 aa12.82□□□□□ -0.36
PSEN1-218ENST00000556864 IGKV2D-40P01614 121 aaPredicted RBP12.82□□□□□ -0.36
PSEN1-218ENST00000556864 SLC25A5P05141 298 aaKnown RBP12.82□□□□□ -0.36
PSEN1-218ENST00000556864 LEPP41159 167 aa12.82□□□□□ -0.36
PSEN1-218ENST00000556864 ALKAL2Q6UX46 152 aa12.82□□□□□ -0.36
PSEN1-218ENST00000556864 RNF183Q96D59 192 aa12.82□□□□□ -0.36
PSEN1-218ENST00000556864 SLC35B3Q9H1N7 401 aa12.82□□□□□ -0.36
PSEN1-218ENST00000556864 RPH3ALQ9UNE2 315 aa12.82□□□□□ -0.36
PSEN1-218ENST00000556864 U3KQK5 164 aa12.82□□□□□ -0.36
PSEN1-218ENST00000556864 ZNF705EA8MWA4 302 aaPredicted RBP12.81□□□□□ -0.36
PSEN1-218ENST00000556864 GGTLC3B5MD39 225 aa12.81□□□□□ -0.36
PSEN1-218ENST00000556864 K7EQM0 130 aa12.81□□□□□ -0.36
PSEN1-218ENST00000556864 UBE2G2P60604 165 aa12.81□□□□□ -0.36
PSEN1-218ENST00000556864 LINC00477Q96M19 166 aa12.81□□□□□ -0.36
PSEN1-218ENST00000556864 TMPRSS5Q9H3S3 457 aa12.81□□□□□ -0.36
PSEN1-218ENST00000556864 XCL2Q9UBD3 114 aa12.81□□□□□ -0.36
PSEN1-218ENST00000556864 TRAV1-1A0A0B4J248 108 aa12.8□□□□□ -0.36
PSEN1-218ENST00000556864 A0A1B0GV50 99 aa12.8□□□□□ -0.36
PSEN1-218ENST00000556864 DIRC3C9JPN6 131 aa12.8□□□□□ -0.36
PSEN1-218ENST00000556864 FXYD7P58549 80 aa12.8□□□□□ -0.36
PSEN1-218ENST00000556864 SPINK13Q1W4C9 94 aa12.8□□□□□ -0.36
PSEN1-218ENST00000556864 C9orf47Q6ZRZ4 202 aa12.8□□□□□ -0.36
PSEN1-218ENST00000556864 OVOL2Q9BRP0 275 aa12.8□□□□□ -0.36
PSEN1-218ENST00000556864 TCEAL7Q9BRU2 100 aa12.8□□□□□ -0.36
PSEN1-218ENST00000556864 MANBALQ9NQG1 85 aa12.8□□□□□ -0.36
PSEN1-218ENST00000556864 GOLT1BQ9Y3E0 138 aa12.8□□□□□ -0.36
PSEN1-218ENST00000556864 FAM74A7A6NL05 159 aa12.79□□□□□ -0.36
PSEN1-218ENST00000556864 IFNA1P01562 189 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms