RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 PRAC2D3DTV9 90 aa7.46□□□□□ -1.22
SPTLC2-205ENST00000556607 H3BQ15 152 aa7.46□□□□□ -1.22
SPTLC2-205ENST00000556607 H7BYZ3 331 aa7.46□□□□□ -1.22
SPTLC2-205ENST00000556607 CLINT1Q14677 625 aa7.46□□□□□ -1.22
SPTLC2-205ENST00000556607 KIR3DS1Q14943 382 aa7.46□□□□□ -1.22
SPTLC2-205ENST00000556607 GUK1Q16774 197 aa7.46□□□□□ -1.22
SPTLC2-205ENST00000556607 TMEM252Q8N6L7 170 aa7.46□□□□□ -1.22
SPTLC2-205ENST00000556607 LYRM2Q9NU23 88 aaPredicted RBP7.46□□□□□ -1.22
SPTLC2-205ENST00000556607 SLC39A9Q9NUM3 307 aa7.46□□□□□ -1.22
SPTLC2-205ENST00000556607 TIMM9Q9Y5J7 89 aa7.46□□□□□ -1.22
SPTLC2-205ENST00000556607 NACAE9PAV3 2078 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 TRAV12-3A0A0B4J271 114 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 PLAC8L1A1L4L8 177 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 SNURFLB1AK76 121 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 RTL8CO15255 209 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 RLN2P04090 185 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 IGLC2P0DOY2 106 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 LEPP41159 167 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 RPL29P47914 159 aaKnown RBP7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 OR5I1Q13606 314 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 ATP6V1FQ16864 119 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 C1orf134Q5TEV5 83 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 ZNF493Q6ZR52 646 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 ENKURQ8TC29 256 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 TMEM263Q8WUH6 116 aaKnown RBP7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 BLNKQ8WV28 456 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 S100ZQ8WXG8 99 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 C20orf144Q9BQM9 153 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 ZNF586Q9NXT0 402 aa7.45□□□□□ -1.22
SPTLC2-205ENST00000556607 SIX6O95475 246 aa7.44□□□□□ -1.22
SPTLC2-205ENST00000556607 CCL18P55774 89 aa7.44□□□□□ -1.22
SPTLC2-205ENST00000556607 VWC2Q2TAL6 325 aa7.44□□□□□ -1.22
SPTLC2-205ENST00000556607 LRRC37A5PQ49AS3 106 aa7.44□□□□□ -1.22
SPTLC2-205ENST00000556607 GFI1BQ5VTD9 330 aa7.44□□□□□ -1.22
SPTLC2-205ENST00000556607 THAP6Q8TBB0 222 aa7.44□□□□□ -1.22
SPTLC2-205ENST00000556607 SAT2Q96F10 170 aaPredicted RBP7.44□□□□□ -1.22
SPTLC2-205ENST00000556607 C11orf1Q9H5F2 150 aa7.44□□□□□ -1.22
SPTLC2-205ENST00000556607 DNAH10Q8IVF4 4471 aa7.43□□□□□ -1.22
SPTLC2-205ENST00000556607 GAGE12BA1L429 117 aa7.43□□□□□ -1.22
SPTLC2-205ENST00000556607 MPDU1O75352 247 aa7.43□□□□□ -1.22
SPTLC2-205ENST00000556607 GAGE7O76087 117 aa7.43□□□□□ -1.22
SPTLC2-205ENST00000556607 GAGE12FP0CL80 117 aa7.43□□□□□ -1.22
SPTLC2-205ENST00000556607 GAGE12GP0CL81 117 aa7.43□□□□□ -1.22
SPTLC2-205ENST00000556607 GAGE12IP0CL82 117 aa7.43□□□□□ -1.22
SPTLC2-205ENST00000556607 CT45A10P0DMU9 189 aa7.43□□□□□ -1.22
SPTLC2-205ENST00000556607 PYYP10082 97 aa7.43□□□□□ -1.22
SPTLC2-205ENST00000556607 NHLH2Q02577 135 aa7.43□□□□□ -1.22
SPTLC2-205ENST00000556607 ERCC8Q13216 396 aa7.43□□□□□ -1.22
SPTLC2-205ENST00000556607 RNASE8Q8TDE3 154 aaKnown RBP7.43□□□□□ -1.22
SPTLC2-205ENST00000556607 NPCDR1Q9BY65 106 aa7.43□□□□□ -1.22
SPTLC2-205ENST00000556607 SLC25A31Q9H0C2 315 aa7.43□□□□□ -1.22
SPTLC2-205ENST00000556607 AAMDCQ9H7C9 122 aa7.43□□□□□ -1.22
SPTLC2-205ENST00000556607 TRBV19A0A075B6N1 114 aa7.42□□□□□ -1.22
SPTLC2-205ENST00000556607 A0A0J9YY99 117 aa7.42□□□□□ -1.22
SPTLC2-205ENST00000556607 A0A1B0GVY2 172 aa7.42□□□□□ -1.22
SPTLC2-205ENST00000556607 NPIPB6E9PJ23 425 aa7.42□□□□□ -1.22
SPTLC2-205ENST00000556607 M0R3E3 92 aa7.42□□□□□ -1.22
SPTLC2-205ENST00000556607 ZNF253O75346 499 aa7.42□□□□□ -1.22
SPTLC2-205ENST00000556607 HIST1H1EP10412 219 aaKnown RBP7.42□□□□□ -1.22
SPTLC2-205ENST00000556607 FAM3BP58499 235 aaPredicted RBP7.42□□□□□ -1.22
SPTLC2-205ENST00000556607 IL15RAQ13261 267 aa7.42□□□□□ -1.22
SPTLC2-205ENST00000556607 ASAH1Q13510 395 aa7.42□□□□□ -1.22
SPTLC2-205ENST00000556607 Q6ZR54 194 aa7.42□□□□□ -1.22
SPTLC2-205ENST00000556607 OR5C1Q8NGR4 320 aa7.42□□□□□ -1.22
SPTLC2-205ENST00000556607 RNF141Q8WVD5 230 aa7.42□□□□□ -1.22
SPTLC2-205ENST00000556607 GNPNAT1Q96EK6 184 aaPredicted RBP7.42□□□□□ -1.22
SPTLC2-205ENST00000556607 DNAH6Q9C0G6 4158 aa7.41□□□□□ -1.22
SPTLC2-205ENST00000556607 TRAV26-1A0A087WT03 109 aa7.41□□□□□ -1.22
SPTLC2-205ENST00000556607 E5RGE8 158 aa7.41□□□□□ -1.22
SPTLC2-205ENST00000556607 ICAM4Q14773 271 aa7.41□□□□□ -1.22
SPTLC2-205ENST00000556607 GCSAMLQ5JQS6 135 aa7.41□□□□□ -1.22
SPTLC2-205ENST00000556607 FAM122CQ6P4D5 195 aa7.41□□□□□ -1.22
SPTLC2-205ENST00000556607 EXOC3-AS1Q8N2X6 119 aa7.41□□□□□ -1.22
SPTLC2-205ENST00000556607 PYGO2Q9BRQ0 406 aa7.41□□□□□ -1.22
SPTLC2-205ENST00000556607 TMEM14CQ9P0S9 112 aa7.41□□□□□ -1.22
SPTLC2-205ENST00000556607 PRELID1Q9Y255 219 aa7.41□□□□□ -1.22
SPTLC2-205ENST00000556607 TRGV2A0A075B6R0 118 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 NBDYA0A0U1RRE5 68 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 C7orf71A4D174 169 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 C17orf112F2Z3M2 114 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 UPK1BO75841 260 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 SLC25A5P05141 298 aaKnown RBP7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 GPX1P07203 203 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 RNASE4P34096 147 aaKnown RBP7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 CYCSP99999 105 aaKnown RBP7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 BTN1A1Q13410 526 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 TMEM78Q5T7P6 136 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 LINC00299Q6ZSB3 139 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 MIR17HGQ75NE6 70 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 SSX7Q7RTT5 188 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 CHAC2Q8WUX2 184 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 MRPL53Q96EL3 112 aaKnown RBP7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 LINC00477Q96M19 166 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 ODF3Q96PU9 254 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 NMES1Q9C002 83 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 OR51M1Q9H341 326 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 OR5AC2Q9NZP5 309 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 LINC00588Q9Y4M8 146 aa7.4□□□□□ -1.22
SPTLC2-205ENST00000556607 IGKV2-40A0A087WW87 121 aaPredicted RBP7.39□□□□□ -1.23
SPTLC2-205ENST00000556607 INMT-MINDY4F8WBC2 141 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms