RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 IGHV1-69-2A0A0G2JMI3 117 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 SERTM2A0A1B0GWG4 89 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 A0A1W2PPI3 338 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 A6NNC1 897 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 TMEM178BH3BS89 294 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 LEPROTL1O95214 131 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 CA1P00915 261 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-241ENST00000556374 RBP4P02753 201 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 OR5AL1P0C617 328 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 NBEAP1P0C6P0 100 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 IGLC2P0DOY2 106 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 IGLC3P0DOY3 106 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 IGHV1-8P0DP01 117 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 CEACAM8P31997 349 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-241ENST00000556374 CEACAM3P40198 252 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 CSN1S1P47710 185 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 ZNF137PP52743 207 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 WT1-ASQ06250 92 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 BSPH1Q075Z2 132 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 FAM27E3Q08E93 113 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 SPRNQ5BIV9 151 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 C10orf55Q5SWW7 151 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 PVRIGQ6DKI7 326 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 GFRALQ6UXV0 394 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 Q6ZS92 163 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 FA2HQ7L5A8 372 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 MED12LQ86YW9 2145 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 ZCCHC24Q8N2G6 241 aaKnown RBP3.48□□□□□ -1.85
ATXN3-241ENST00000556374 ZNF738Q8NE65 137 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 NUP35Q8NFH5 326 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 SVIPQ8NHG7 77 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 C8orf46Q8TAG6 207 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 ITLN2Q8WWU7 325 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-241ENST00000556374 CCL17Q92583 94 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 FAM167A-AS1Q96KT0 104 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 RCHY1Q96PM5 261 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 OR8B2Q96RD0 313 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 PMCHL2Q9BQD1 86 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 SRSF8Q9BRL6 282 aaKnown RBP3.48□□□□□ -1.85
ATXN3-241ENST00000556374 ALKBH7Q9BT30 221 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-241ENST00000556374 TMEM208Q9BTX3 173 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 CLEC7AQ9BXN2 247 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 AAMDCQ9H7C9 122 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 ST20Q9HBF5 79 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 OTORQ9NRC9 128 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 TMEM14CQ9P0S9 112 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 ZNRD1Q9P1U0 126 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 LAMTOR2Q9Y2Q5 125 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 MRPS16Q9Y3D3 137 aaKnown RBP3.48□□□□□ -1.85
ATXN3-241ENST00000556374 INSIG2Q9Y5U4 225 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 YLPM1P49750 1951 aaKnown RBP3.48□□□□□ -1.85
ATXN3-241ENST00000556374 MXRA5Q9NR99 2828 aa3.48□□□□□ -1.85
ATXN3-241ENST00000556374 AKAP6Q13023 2319 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 ANK2Q01484 3957 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.47□□□□□ -1.85
ATXN3-241ENST00000556374 IGHV2-26A0A0B4J1V2 119 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 A0A1B0GXF2 115 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 PSMB11A5LHX3 300 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 FAM231BA6NCW3 169 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 OR4C46A6NHA9 309 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 FBLL1A6NHQ2 334 aaKnown RBP3.47□□□□□ -1.85
ATXN3-241ENST00000556374 SRRM4A7MD48 611 aaKnown RBP3.47□□□□□ -1.85
ATXN3-241ENST00000556374 CNIH1O95406 144 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 LTAP01374 205 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 IGLV2-8P01709 118 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 TCRAP04437 139 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 GP9P14770 177 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 COX7A1P24310 79 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 LOXP28300 417 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-241ENST00000556374 CTRLP40313 264 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 PLP1P60201 277 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 SLAQ13239 276 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 MMDQ15546 238 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 ADIPOQQ15848 244 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 TMEM155Q4W5P6 130 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 HCP5Q6MZN7 132 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 PET117Q6UWS5 81 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 Q71RC1 249 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-241ENST00000556374 TCF24Q7RTU0 167 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 PRNTQ86SH4 94 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 NIT1Q86X76 327 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 BPIFA4PQ86YQ2 179 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 ATOH7Q8N100 152 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 CIARTQ8N365 385 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-241ENST00000556374 FAM19A2Q8N3H0 131 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 TMEM75Q8N9X5 138 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 TMEM116Q8NCL8 245 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 OR8B3Q8NGG8 313 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 ORAOV1Q8WV07 137 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 TIMD4Q96H15 378 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 PGLYRP4Q96LB8 373 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 FOXC2Q99958 501 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 NDFIP1Q9BT67 221 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 RAB1BQ9H0U4 201 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 FNDC4Q9H6D8 234 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-241ENST00000556374 KAAG1Q9UBP8 84 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 SH3BGRL2Q9UJC5 107 aa3.47□□□□□ -1.85
ATXN3-241ENST00000556374 F11RQ9Y624 299 aaKnown RBP3.47□□□□□ -1.85
ATXN3-241ENST00000556374 CUBNO60494 3623 aa3.46□□□□□ -1.85
ATXN3-241ENST00000556374 TLN2Q9Y4G6 2542 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms