RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 C16orf74Q96GX8 76 aa8.95□□□□□ -0.98
SNX6-207ENST00000556303 ODF3Q96PU9 254 aa8.95□□□□□ -0.98
SNX6-207ENST00000556303 LINC01587Q99440 93 aa8.95□□□□□ -0.98
SNX6-207ENST00000556303 SLC25A31Q9H0C2 315 aa8.95□□□□□ -0.98
SNX6-207ENST00000556303 PTTG2Q9NZH5 202 aa8.95□□□□□ -0.98
SNX6-207ENST00000556303 TRAV12-2A0A075B6T6 113 aa8.94□□□□□ -0.98
SNX6-207ENST00000556303 ZNF705GA8MUZ8 300 aaPredicted RBP8.94□□□□□ -0.98
SNX6-207ENST00000556303 H7BYZ3 331 aa8.94□□□□□ -0.98
SNX6-207ENST00000556303 PDE6HQ13956 83 aa8.94□□□□□ -0.98
SNX6-207ENST00000556303 MORN5Q5VZ52 161 aa8.94□□□□□ -0.98
SNX6-207ENST00000556303 BAP18Q8IXM2 172 aa8.94□□□□□ -0.98
SNX6-207ENST00000556303 C15orf53Q8NAA6 179 aa8.94□□□□□ -0.98
SNX6-207ENST00000556303 TMEM14CQ9P0S9 112 aa8.94□□□□□ -0.98
SNX6-207ENST00000556303 PKHD1P08F94 4074 aa8.94□□□□□ -0.98
SNX6-207ENST00000556303 UBE2L5PA0A1B0GUS4 154 aa8.93□□□□□ -0.98
SNX6-207ENST00000556303 H3BQ15 152 aa8.93□□□□□ -0.98
SNX6-207ENST00000556303 HIST1H1EP10412 219 aaKnown RBP8.93□□□□□ -0.98
SNX6-207ENST00000556303 FGF7P21781 194 aa8.93□□□□□ -0.98
SNX6-207ENST00000556303 FAM3BP58499 235 aaPredicted RBP8.93□□□□□ -0.98
SNX6-207ENST00000556303 LGALS9BQ3B8N2 356 aa8.93□□□□□ -0.98
SNX6-207ENST00000556303 MARVELD1Q9BSK0 173 aa8.93□□□□□ -0.98
SNX6-207ENST00000556303 NPCDR1Q9BY65 106 aa8.93□□□□□ -0.98
SNX6-207ENST00000556303 KCNIP2Q9NS61 270 aa8.93□□□□□ -0.98
SNX6-207ENST00000556303 PRELID1Q9Y255 219 aa8.93□□□□□ -0.98
SNX6-207ENST00000556303 TIMM8BQ9Y5J9 83 aaPredicted RBP8.93□□□□□ -0.98
SNX6-207ENST00000556303 TRBV19A0A075B6N1 114 aa8.92□□□□□ -0.98
SNX6-207ENST00000556303 PLAC8L1A1L4L8 177 aa8.92□□□□□ -0.98
SNX6-207ENST00000556303 INMT-MINDY4F8WBC2 141 aa8.92□□□□□ -0.98
SNX6-207ENST00000556303 SLC17A3O00476 420 aa8.92□□□□□ -0.98
SNX6-207ENST00000556303 TMEM263Q8WUH6 116 aaKnown RBP8.92□□□□□ -0.98
SNX6-207ENST00000556303 TRAV5A0A0B4J249 113 aa8.91□□□□□ -0.98
SNX6-207ENST00000556303 CBY3A6NI87 242 aa8.91□□□□□ -0.98
SNX6-207ENST00000556303 HTN3P15516 51 aa8.91□□□□□ -0.98
SNX6-207ENST00000556303 AZU1P20160 251 aa8.91□□□□□ -0.98
SNX6-207ENST00000556303 LEPP41159 167 aa8.91□□□□□ -0.98
SNX6-207ENST00000556303 DEFA1P59665 94 aa8.91□□□□□ -0.98
SNX6-207ENST00000556303 DEFA3P59666 94 aa8.91□□□□□ -0.98
SNX6-207ENST00000556303 CCDC28AQ8IWP9 274 aa8.91□□□□□ -0.98
SNX6-207ENST00000556303 OR5C1Q8NGR4 320 aa8.91□□□□□ -0.98
SNX6-207ENST00000556303 RNASE8Q8TDE3 154 aaKnown RBP8.91□□□□□ -0.98
SNX6-207ENST00000556303 ZNF586Q9NXT0 402 aa8.91□□□□□ -0.98
SNX6-207ENST00000556303 PRAC2D3DTV9 90 aa8.9□□□□□ -0.98
SNX6-207ENST00000556303 NPIPB6E9PJ23 425 aa8.9□□□□□ -0.98
SNX6-207ENST00000556303 PRM2P04554 102 aa8.9□□□□□ -0.98
SNX6-207ENST00000556303 ATP5G1P05496 136 aa8.9□□□□□ -0.98
SNX6-207ENST00000556303 PET100P0DJ07 73 aa8.9□□□□□ -0.98
SNX6-207ENST00000556303 ATP5G3P48201 142 aa8.9□□□□□ -0.98
SNX6-207ENST00000556303 IFITM3Q01628 133 aa8.9□□□□□ -0.98
SNX6-207ENST00000556303 NHLH2Q02577 135 aa8.9□□□□□ -0.98
SNX6-207ENST00000556303 TMEM88Q6PEY1 159 aa8.9□□□□□ -0.98
SNX6-207ENST00000556303 UBE2DNLQ8IWF7 75 aa8.9□□□□□ -0.98
SNX6-207ENST00000556303 LINC00477Q96M19 166 aa8.9□□□□□ -0.98
SNX6-207ENST00000556303 C17orf112F2Z3M2 114 aa8.89□□□□□ -0.99
SNX6-207ENST00000556303 SIX6O95475 246 aa8.89□□□□□ -0.99
SNX6-207ENST00000556303 SLC25A5P05141 298 aaKnown RBP8.89□□□□□ -0.99
SNX6-207ENST00000556303 SNRPCP09234 159 aaKnown RBP8.89□□□□□ -0.99
SNX6-207ENST00000556303 CT45A10P0DMU9 189 aa8.89□□□□□ -0.99
SNX6-207ENST00000556303 DEFB130BP0DP73 79 aa8.89□□□□□ -0.99
SNX6-207ENST00000556303 DEFB130AP0DP74 79 aa8.89□□□□□ -0.99
SNX6-207ENST00000556303 HTN1P15515 57 aa8.89□□□□□ -0.99
SNX6-207ENST00000556303 GFI1BQ5VTD9 330 aa8.89□□□□□ -0.99
SNX6-207ENST00000556303 PYGO2Q9BRQ0 406 aa8.89□□□□□ -0.99
SNX6-207ENST00000556303 MRPL32Q9BYC8 188 aaKnown RBP8.89□□□□□ -0.99
SNX6-207ENST00000556303 WDR61Q9GZS3 305 aaKnown RBP8.89□□□□□ -0.99
SNX6-207ENST00000556303 AAMDCQ9H7C9 122 aa8.89□□□□□ -0.99
SNX6-207ENST00000556303 BATF3Q9NR55 127 aa8.89□□□□□ -0.99
SNX6-207ENST00000556303 OR5AC2Q9NZP5 309 aa8.89□□□□□ -0.99
SNX6-207ENST00000556303 TIMM9Q9Y5J7 89 aa8.89□□□□□ -0.99
SNX6-207ENST00000556303 PKD1P98161 4303 aa8.89□□□□□ -0.99
SNX6-207ENST00000556303 HERC2O95714 4834 aa8.89□□□□□ -0.99
SNX6-207ENST00000556303 H0YIZ8 118 aa8.88□□□□□ -0.99
SNX6-207ENST00000556303 H3BTX0 84 aa8.88□□□□□ -0.99
SNX6-207ENST00000556303 NDUFB4O95168 129 aa8.88□□□□□ -0.99
SNX6-207ENST00000556303 NMBP08949 121 aa8.88□□□□□ -0.99
SNX6-207ENST00000556303 PPP1R1CQ8WVI7 109 aa8.88□□□□□ -0.99
SNX6-207ENST00000556303 DNAH11Q96DT5 4516 aa8.88□□□□□ -0.99
SNX6-207ENST00000556303 F5H768 121 aa8.87□□□□□ -0.99
SNX6-207ENST00000556303 H2BFSP57053 126 aa8.87□□□□□ -0.99
SNX6-207ENST00000556303 FCN2Q15485 313 aa8.87□□□□□ -0.99
SNX6-207ENST00000556303 LRRC37A5PQ49AS3 106 aa8.87□□□□□ -0.99
SNX6-207ENST00000556303 LINC00612Q8N6U2 182 aa8.87□□□□□ -0.99
SNX6-207ENST00000556303 THAP6Q8TBB0 222 aa8.87□□□□□ -0.99
SNX6-207ENST00000556303 FAM167A-AS1Q96KT0 104 aa8.87□□□□□ -0.99
SNX6-207ENST00000556303 FAM19A4Q96LR4 140 aa8.87□□□□□ -0.99
SNX6-207ENST00000556303 LINC00467Q9BRT7 94 aa8.87□□□□□ -0.99
SNX6-207ENST00000556303 SLC25A2Q9BXI2 301 aa8.87□□□□□ -0.99
SNX6-207ENST00000556303 OR51M1Q9H341 326 aa8.87□□□□□ -0.99
SNX6-207ENST00000556303 NOP10Q9NPE3 64 aaKnown RBP8.87□□□□□ -0.99
SNX6-207ENST00000556303 DYNC1H1Q14204 4646 aaKnown RBP8.86□□□□□ -0.99
SNX6-207ENST00000556303 TRBV7-9A0A0J9YWB2 115 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 KLLNB2CW77 178 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 SSNA1O43805 119 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 MPC2O95563 127 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 NBEAP1P0C6P0 100 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 PYYP10082 97 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 CRISP2P16562 243 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 DAZ2Q13117 558 aaKnown RBP8.86□□□□□ -0.99
SNX6-207ENST00000556303 CLINT1Q14677 625 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 KIR3DS1Q14943 382 aa8.86□□□□□ -0.99
SNX6-207ENST00000556303 SOHLH1Q5JUK2 328 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms