RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 FHITP49789 147 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 BLOC1S1P78537 153 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 ICAM4Q14773 271 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 ZNF726P1Q15940 193 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 LCE2CQ5TA81 110 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 IGFL4Q6B9Z1 124 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 MORN3Q6PF18 240 aaPredicted RBP5.66□□□□□ -1.5
TDP1-214ENST00000556063 ALKAL2Q6UX46 152 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 KIR2DL5AQ8N109 375 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 RNF182Q8N6D2 247 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 ARL6IP6Q8N6S5 226 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 OR10J6PQ8NGY7 276 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 KIR2DL5BQ8NHK3 375 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 WFDC10AQ9H1F0 79 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 Q9H3A6 140 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 SAV1Q9H4B6 383 aaPredicted RBP5.66□□□□□ -1.5
TDP1-214ENST00000556063 OTORQ9NRC9 128 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 PPP1R14DQ9NXH3 145 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 HLA-DRB4X5D2U9 266 aa5.66□□□□□ -1.5
TDP1-214ENST00000556063 A0A0J9YX75 114 aa5.65□□□□□ -1.5
TDP1-214ENST00000556063 A0A1W2PRE2 83 aa5.65□□□□□ -1.5
TDP1-214ENST00000556063 PGPA6NDG6 321 aa5.65□□□□□ -1.5
TDP1-214ENST00000556063 H3BMM0 161 aa5.65□□□□□ -1.5
TDP1-214ENST00000556063 RPL35AP18077 110 aaKnown RBP5.65□□□□□ -1.5
TDP1-214ENST00000556063 FGF8P55075 233 aaPredicted RBP5.65□□□□□ -1.5
TDP1-214ENST00000556063 HIST1H1AQ02539 215 aaPredicted RBP5.65□□□□□ -1.5
TDP1-214ENST00000556063 EXOC3-AS1Q8N2X6 119 aa5.65□□□□□ -1.5
TDP1-214ENST00000556063 OR4B1Q8NGF8 309 aa5.65□□□□□ -1.5
TDP1-214ENST00000556063 OR8A1Q8NGG7 326 aa5.65□□□□□ -1.5
TDP1-214ENST00000556063 SUN5Q8TC36 379 aa5.65□□□□□ -1.5
TDP1-214ENST00000556063 C20orf173Q96LM9 149 aa5.65□□□□□ -1.5
TDP1-214ENST00000556063 CLUHP3Q96NS8 147 aa5.65□□□□□ -1.5
TDP1-214ENST00000556063 C1QTNF4Q9BXJ3 329 aa5.65□□□□□ -1.5
TDP1-214ENST00000556063 CSTL1Q9H114 145 aa5.65□□□□□ -1.5
TDP1-214ENST00000556063 ARL2-SNX15V9GYD0 113 aa5.65□□□□□ -1.5
TDP1-214ENST00000556063 ANK2Q01484 3957 aa5.65□□□□□ -1.51
TDP1-214ENST00000556063 SERTM2A0A1B0GWG4 89 aa5.64□□□□□ -1.51
TDP1-214ENST00000556063 RBMY1BA6NDE4 496 aaKnown RBP5.64□□□□□ -1.51
TDP1-214ENST00000556063 RBMY1EA6NEQ0 496 aaKnown RBP5.64□□□□□ -1.51
TDP1-214ENST00000556063 F6UZH7 168 aa5.64□□□□□ -1.51
TDP1-214ENST00000556063 K7EQM0 130 aa5.64□□□□□ -1.51
TDP1-214ENST00000556063 M0R3E3 92 aa5.64□□□□□ -1.51
TDP1-214ENST00000556063 IFNA1P01562 189 aa5.64□□□□□ -1.51
TDP1-214ENST00000556063 AMBPP02760 352 aa5.64□□□□□ -1.51
TDP1-214ENST00000556063 SLC25A5P05141 298 aaKnown RBP5.64□□□□□ -1.51
TDP1-214ENST00000556063 RBMY1DP0C7P1 496 aaKnown RBP5.64□□□□□ -1.51
TDP1-214ENST00000556063 HLA-DMBP28068 263 aa5.64□□□□□ -1.51
TDP1-214ENST00000556063 TSPOP30536 169 aa5.64□□□□□ -1.51
TDP1-214ENST00000556063 TAGLN2P37802 199 aaKnown RBP5.64□□□□□ -1.51
TDP1-214ENST00000556063 SUMO1P63165 101 aaKnown RBP5.64□□□□□ -1.51
TDP1-214ENST00000556063 ZNF124Q15973 351 aa5.64□□□□□ -1.51
TDP1-214ENST00000556063 LINC00322Q6ZN03 302 aaPredicted RBP5.64□□□□□ -1.51
TDP1-214ENST00000556063 SSX7Q7RTT5 188 aa5.64□□□□□ -1.51
TDP1-214ENST00000556063 TRPT1Q86TN4 253 aaKnown RBP5.64□□□□□ -1.51
TDP1-214ENST00000556063 C5orf17Q8NAS9 161 aa5.64□□□□□ -1.51
TDP1-214ENST00000556063 LINC00477Q96M19 166 aa5.64□□□□□ -1.51
TDP1-214ENST00000556063 CITED4Q96RK1 184 aa5.64□□□□□ -1.51
TDP1-214ENST00000556063 TMPRSS5Q9H3S3 457 aa5.64□□□□□ -1.51
TDP1-214ENST00000556063 MANBALQ9NQG1 85 aa5.64□□□□□ -1.51
TDP1-214ENST00000556063 A0A1B0GV50 99 aa5.63□□□□□ -1.51
TDP1-214ENST00000556063 RBAKDNA6NC62 111 aa5.63□□□□□ -1.51
TDP1-214ENST00000556063 FBLL1A6NHQ2 334 aaKnown RBP5.63□□□□□ -1.51
TDP1-214ENST00000556063 ZNF705FA8MVS1 300 aaPredicted RBP5.63□□□□□ -1.51
TDP1-214ENST00000556063 F6UB75 175 aa5.63□□□□□ -1.51
TDP1-214ENST00000556063 IGKV3-20P01619 116 aa5.63□□□□□ -1.51
TDP1-214ENST00000556063 NHLRC4P0CG21 123 aaPredicted RBP5.63□□□□□ -1.51
TDP1-214ENST00000556063 CNN1P51911 297 aaKnown RBP5.63□□□□□ -1.51
TDP1-214ENST00000556063 UBE2G2P60604 165 aa5.63□□□□□ -1.51
TDP1-214ENST00000556063 HAGHQ16775 308 aa5.63□□□□□ -1.51
TDP1-214ENST00000556063 TMEM78Q5T7P6 136 aa5.63□□□□□ -1.51
TDP1-214ENST00000556063 CST9LP1Q5W188 147 aa5.63□□□□□ -1.51
TDP1-214ENST00000556063 TEX261Q6UWH6 196 aa5.63□□□□□ -1.51
TDP1-214ENST00000556063 ZNF680Q8NEM1 530 aa5.63□□□□□ -1.51
TDP1-214ENST00000556063 B9D2Q9BPU9 175 aa5.63□□□□□ -1.51
TDP1-214ENST00000556063 TXNDC17Q9BRA2 123 aa5.63□□□□□ -1.51
TDP1-214ENST00000556063 TCEAL7Q9BRU2 100 aa5.63□□□□□ -1.51
TDP1-214ENST00000556063 ZMAT4Q9H898 229 aa5.63□□□□□ -1.51
TDP1-214ENST00000556063 FAM74A7A6NL05 159 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 DIRC3C9JPN6 131 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 NPIPB6E9PJ23 425 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 PAGE4O60829 102 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 CA1P00915 261 aaPredicted RBP5.62□□□□□ -1.51
TDP1-214ENST00000556063 LEPP41159 167 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 DEFB1P60022 68 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 RAB14P61106 215 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 PMS2P11Q13670 270 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 GDF5OSQ5U4N7 250 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 C9orf47Q6ZRZ4 202 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 Q6ZWC4 215 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 HIST1H2BAQ96A08 127 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 ODF3Q96PU9 254 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 SPATA25Q9BR10 227 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 GNG13Q9P2W3 67 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 EPDR1Q9UM22 224 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 RPH3ALQ9UNE2 315 aa5.62□□□□□ -1.51
TDP1-214ENST00000556063 YTHDF2Q9Y5A9 579 aaKnown RBP5.62□□□□□ -1.51
TDP1-214ENST00000556063 IGKV2-40A0A087WW87 121 aaPredicted RBP5.61□□□□□ -1.51
TDP1-214ENST00000556063 TRBV7-9A0A0J9YWB2 115 aa5.61□□□□□ -1.51
TDP1-214ENST00000556063 A8MTW9 85 aa5.61□□□□□ -1.51
TDP1-214ENST00000556063 GGTLC3B5MD39 225 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms