RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 ENKURQ8TC29 256 aa10.91□□□□□ -0.66
SNX6-205ENST00000555648 C20orf144Q9BQM9 153 aa10.91□□□□□ -0.66
SNX6-205ENST00000555648 BOLA1Q9Y3E2 137 aa10.91□□□□□ -0.66
SNX6-205ENST00000555648 TRAV5A0A0B4J249 113 aa10.9□□□□□ -0.66
SNX6-205ENST00000555648 CBY3A6NI87 242 aa10.9□□□□□ -0.66
SNX6-205ENST00000555648 J3KRW8 73 aa10.9□□□□□ -0.66
SNX6-205ENST00000555648 SLC17A3O00476 420 aa10.9□□□□□ -0.66
SNX6-205ENST00000555648 IGLC2P0DOY2 106 aa10.9□□□□□ -0.66
SNX6-205ENST00000555648 LEPP41159 167 aa10.9□□□□□ -0.66
SNX6-205ENST00000555648 FAM3BP58499 235 aaPredicted RBP10.9□□□□□ -0.66
SNX6-205ENST00000555648 LINC00299Q6ZSB3 139 aa10.9□□□□□ -0.66
SNX6-205ENST00000555648 TMEM263Q8WUH6 116 aaKnown RBP10.9□□□□□ -0.66
SNX6-205ENST00000555648 NOP10Q9NPE3 64 aaKnown RBP10.9□□□□□ -0.66
SNX6-205ENST00000555648 IGSF23A1L1A6 192 aa10.89□□□□□ -0.67
SNX6-205ENST00000555648 H3BQ15 152 aa10.89□□□□□ -0.67
SNX6-205ENST00000555648 VWC2Q2TAL6 325 aa10.89□□□□□ -0.67
SNX6-205ENST00000555648 C11orf1Q9H5F2 150 aa10.89□□□□□ -0.67
SNX6-205ENST00000555648 TIMM9Q9Y5J7 89 aa10.89□□□□□ -0.67
SNX6-205ENST00000555648 KMT2AQ03164 3969 aa10.89□□□□□ -0.67
SNX6-205ENST00000555648 PLAC8L1A1L4L8 177 aa10.88□□□□□ -0.67
SNX6-205ENST00000555648 PRAC2D3DTV9 90 aa10.88□□□□□ -0.67
SNX6-205ENST00000555648 MPDU1O75352 247 aa10.88□□□□□ -0.67
SNX6-205ENST00000555648 CCL18P55774 89 aa10.88□□□□□ -0.67
SNX6-205ENST00000555648 ASAH1Q13510 395 aa10.88□□□□□ -0.67
SNX6-205ENST00000555648 CLINT1Q14677 625 aa10.88□□□□□ -0.67
SNX6-205ENST00000555648 GFI1BQ5VTD9 330 aa10.88□□□□□ -0.67
SNX6-205ENST00000555648 SAT2Q96F10 170 aaPredicted RBP10.88□□□□□ -0.67
SNX6-205ENST00000555648 PARD6GQ9BYG4 376 aaPredicted RBP10.88□□□□□ -0.67
SNX6-205ENST00000555648 SLC25A31Q9H0C2 315 aa10.88□□□□□ -0.67
SNX6-205ENST00000555648 SNURFLB1AK76 121 aa10.87□□□□□ -0.67
SNX6-205ENST00000555648 ZNF253O75346 499 aa10.87□□□□□ -0.67
SNX6-205ENST00000555648 C1orf134Q5TEV5 83 aa10.87□□□□□ -0.67
SNX6-205ENST00000555648 RNASE8Q8TDE3 154 aaKnown RBP10.87□□□□□ -0.67
SNX6-205ENST00000555648 AAMDCQ9H7C9 122 aa10.87□□□□□ -0.67
SNX6-205ENST00000555648 RTL8CO15255 209 aa10.86□□□□□ -0.67
SNX6-205ENST00000555648 HIST1H1EP10412 219 aaKnown RBP10.86□□□□□ -0.67
SNX6-205ENST00000555648 IL15RAQ13261 267 aa10.86□□□□□ -0.67
SNX6-205ENST00000555648 OR5I1Q13606 314 aa10.86□□□□□ -0.67
SNX6-205ENST00000555648 CHAC2Q8WUX2 184 aa10.86□□□□□ -0.67
SNX6-205ENST00000555648 MRPL53Q96EL3 112 aaKnown RBP10.86□□□□□ -0.67
SNX6-205ENST00000555648 ODF3Q96PU9 254 aa10.86□□□□□ -0.67
SNX6-205ENST00000555648 ZNF586Q9NXT0 402 aa10.86□□□□□ -0.67
SNX6-205ENST00000555648 PRELID1Q9Y255 219 aa10.86□□□□□ -0.67
SNX6-205ENST00000555648 TRBV19A0A075B6N1 114 aa10.85□□□□□ -0.67
SNX6-205ENST00000555648 TRAV12-3A0A0B4J271 114 aa10.85□□□□□ -0.67
SNX6-205ENST00000555648 E5RGE8 158 aa10.85□□□□□ -0.67
SNX6-205ENST00000555648 NPIPB6E9PJ23 425 aa10.85□□□□□ -0.67
SNX6-205ENST00000555648 CT45A10P0DMU9 189 aa10.85□□□□□ -0.67
SNX6-205ENST00000555648 CYCSP99999 105 aaKnown RBP10.85□□□□□ -0.67
SNX6-205ENST00000555648 KIR3DS1Q14943 382 aa10.85□□□□□ -0.67
SNX6-205ENST00000555648 LRRC37A5PQ49AS3 106 aa10.85□□□□□ -0.67
SNX6-205ENST00000555648 Q6ZR54 194 aa10.85□□□□□ -0.67
SNX6-205ENST00000555648 BLNKQ8WV28 456 aa10.85□□□□□ -0.67
SNX6-205ENST00000555648 NPCDR1Q9BY65 106 aa10.85□□□□□ -0.67
SNX6-205ENST00000555648 KCNIP2Q9NS61 270 aa10.85□□□□□ -0.67
SNX6-205ENST00000555648 TMEM14CQ9P0S9 112 aa10.85□□□□□ -0.67
SNX6-205ENST00000555648 GAGE12BA1L429 117 aa10.84□□□□□ -0.67
SNX6-205ENST00000555648 PRAF2O60831 178 aa10.84□□□□□ -0.67
SNX6-205ENST00000555648 GAGE7O76087 117 aa10.84□□□□□ -0.67
SNX6-205ENST00000555648 SIX6O95475 246 aa10.84□□□□□ -0.67
SNX6-205ENST00000555648 SLC25A5P05141 298 aaKnown RBP10.84□□□□□ -0.67
SNX6-205ENST00000555648 GAGE12FP0CL80 117 aa10.84□□□□□ -0.67
SNX6-205ENST00000555648 GAGE12GP0CL81 117 aa10.84□□□□□ -0.67
SNX6-205ENST00000555648 GAGE12IP0CL82 117 aa10.84□□□□□ -0.67
SNX6-205ENST00000555648 PDE6HQ13956 83 aa10.84□□□□□ -0.67
SNX6-205ENST00000555648 OR5C1Q8NGR4 320 aa10.84□□□□□ -0.67
SNX6-205ENST00000555648 THAP6Q8TBB0 222 aa10.84□□□□□ -0.67
SNX6-205ENST00000555648 PYGO2Q9BRQ0 406 aa10.84□□□□□ -0.67
SNX6-205ENST00000555648 M0R3E3 92 aa10.83□□□□□ -0.68
SNX6-205ENST00000555648 UPK1BO75841 260 aa10.83□□□□□ -0.68
SNX6-205ENST00000555648 PYYP10082 97 aa10.83□□□□□ -0.68
SNX6-205ENST00000555648 NHLH2Q02577 135 aa10.83□□□□□ -0.68
SNX6-205ENST00000555648 RNF141Q8WVD5 230 aa10.83□□□□□ -0.68
SNX6-205ENST00000555648 GNPNAT1Q96EK6 184 aaPredicted RBP10.83□□□□□ -0.68
SNX6-205ENST00000555648 LINC00477Q96M19 166 aa10.83□□□□□ -0.68
SNX6-205ENST00000555648 NMES1Q9C002 83 aa10.83□□□□□ -0.68
SNX6-205ENST00000555648 A0A1B0GVY2 172 aa10.82□□□□□ -0.68
SNX6-205ENST00000555648 C7orf71A4D174 169 aa10.82□□□□□ -0.68
SNX6-205ENST00000555648 C17orf112F2Z3M2 114 aa10.82□□□□□ -0.68
SNX6-205ENST00000555648 INMT-MINDY4F8WBC2 141 aa10.82□□□□□ -0.68
SNX6-205ENST00000555648 M6PRP20645 277 aa10.82□□□□□ -0.68
SNX6-205ENST00000555648 ZNF680Q8NEM1 530 aa10.82□□□□□ -0.68
SNX6-205ENST00000555648 TRAV26-1A0A087WT03 109 aa10.81□□□□□ -0.68
SNX6-205ENST00000555648 GPX1P07203 203 aa10.81□□□□□ -0.68
SNX6-205ENST00000555648 ERCC8Q13216 396 aa10.81□□□□□ -0.68
SNX6-205ENST00000555648 ICAM4Q14773 271 aa10.81□□□□□ -0.68
SNX6-205ENST00000555648 GCSAMLQ5JQS6 135 aa10.81□□□□□ -0.68
SNX6-205ENST00000555648 TMEM78Q5T7P6 136 aa10.81□□□□□ -0.68
SNX6-205ENST00000555648 EXOC3-AS1Q8N2X6 119 aa10.81□□□□□ -0.68
SNX6-205ENST00000555648 OR51M1Q9H341 326 aa10.81□□□□□ -0.68
SNX6-205ENST00000555648 TRGV2A0A075B6R0 118 aa10.8□□□□□ -0.68
SNX6-205ENST00000555648 A0A0J9YY99 117 aa10.8□□□□□ -0.68
SNX6-205ENST00000555648 SSNA1O43805 119 aa10.8□□□□□ -0.68
SNX6-205ENST00000555648 NDUFB4O95168 129 aa10.8□□□□□ -0.68
SNX6-205ENST00000555648 NBEAP1P0C6P0 100 aa10.8□□□□□ -0.68
SNX6-205ENST00000555648 PET100P0DJ07 73 aa10.8□□□□□ -0.68
SNX6-205ENST00000555648 RNASE4P34096 147 aaKnown RBP10.8□□□□□ -0.68
SNX6-205ENST00000555648 DEFA1P59665 94 aa10.8□□□□□ -0.68
SNX6-205ENST00000555648 DEFA3P59666 94 aa10.8□□□□□ -0.68
SNX6-205ENST00000555648 FAM122CQ6P4D5 195 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms