RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 SLC25A2Q9BXI2 301 aa14.68□□□□□ -0.06
VTI1B-205ENST00000555543 TMEM14CQ9P0S9 112 aa14.68□□□□□ -0.06
VTI1B-205ENST00000555543 TRBV19A0A075B6N1 114 aa14.67□□□□□ -0.06
VTI1B-205ENST00000555543 TMEM189A5PLL7 270 aa14.67□□□□□ -0.06
VTI1B-205ENST00000555543 HBE1P02100 147 aa14.67□□□□□ -0.06
VTI1B-205ENST00000555543 PRM2P04554 102 aa14.67□□□□□ -0.06
VTI1B-205ENST00000555543 MIR17HGQ75NE6 70 aa14.67□□□□□ -0.06
VTI1B-205ENST00000555543 ST6GAL2Q96JF0 529 aa14.67□□□□□ -0.06
VTI1B-205ENST00000555543 FAM167A-AS1Q96KT0 104 aa14.67□□□□□ -0.06
VTI1B-205ENST00000555543 TMEM208Q9BTX3 173 aa14.67□□□□□ -0.06
VTI1B-205ENST00000555543 TRAV10A0A0B4J240 114 aa14.66□□□□□ -0.06
VTI1B-205ENST00000555543 LOC102723971A0A1B0GUV8 181 aa14.66□□□□□ -0.06
VTI1B-205ENST00000555543 IGLL5B9A064 214 aa14.66□□□□□ -0.06
VTI1B-205ENST00000555543 ZNF253O75346 499 aa14.66□□□□□ -0.06
VTI1B-205ENST00000555543 NDUFB4O95168 129 aa14.66□□□□□ -0.06
VTI1B-205ENST00000555543 PARD6GQ9BYG4 376 aaPredicted RBP14.66□□□□□ -0.06
VTI1B-205ENST00000555543 WFDC1Q9HC57 220 aa14.66□□□□□ -0.06
VTI1B-205ENST00000555543 KCNIP2Q9NS61 270 aa14.66□□□□□ -0.06
VTI1B-205ENST00000555543 HIST1H1EP10412 219 aaKnown RBP14.65□□□□□ -0.06
VTI1B-205ENST00000555543 RRN3P1Q2M238 152 aa14.65□□□□□ -0.06
VTI1B-205ENST00000555543 FAM222AQ5U5X8 452 aa14.65□□□□□ -0.06
VTI1B-205ENST00000555543 PPP1R14DQ9NXH3 145 aa14.65□□□□□ -0.06
VTI1B-205ENST00000555543 DKK2Q9UBU2 259 aa14.65□□□□□ -0.06
VTI1B-205ENST00000555543 YTHDF2Q9Y5A9 579 aaKnown RBP14.65□□□□□ -0.06
VTI1B-205ENST00000555543 ZNF705GA8MUZ8 300 aaPredicted RBP14.64□□□□□ -0.07
VTI1B-205ENST00000555543 M0R3E3 92 aa14.64□□□□□ -0.07
VTI1B-205ENST00000555543 SPART-AS1P0CW21 52 aa14.64□□□□□ -0.07
VTI1B-205ENST00000555543 CD300CQ08708 224 aa14.64□□□□□ -0.07
VTI1B-205ENST00000555543 KIR3DS1Q14943 382 aa14.64□□□□□ -0.07
VTI1B-205ENST00000555543 OR10J6PQ8NGY7 276 aa14.64□□□□□ -0.07
VTI1B-205ENST00000555543 APLNQ9ULZ1 77 aa14.64□□□□□ -0.07
VTI1B-205ENST00000555543 C17orf112F2Z3M2 114 aa14.63□□□□□ -0.07
VTI1B-205ENST00000555543 TCTE3Q8IZS6 198 aa14.63□□□□□ -0.07
VTI1B-205ENST00000555543 RPP25LQ8N5L8 163 aaKnown RBP14.63□□□□□ -0.07
VTI1B-205ENST00000555543 BLNKQ8WV28 456 aa14.63□□□□□ -0.07
VTI1B-205ENST00000555543 PLA2G2EQ9NZK7 142 aa14.63□□□□□ -0.07
VTI1B-205ENST00000555543 FUT9Q9Y231 359 aa14.63□□□□□ -0.07
VTI1B-205ENST00000555543 DEFB131BA0A096LNP1 70 aa14.62□□□□□ -0.07
VTI1B-205ENST00000555543 IFNA5P01569 189 aa14.62□□□□□ -0.07
VTI1B-205ENST00000555543 CDKN1BP46527 198 aa14.62□□□□□ -0.07
VTI1B-205ENST00000555543 PDE6HQ13956 83 aa14.62□□□□□ -0.07
VTI1B-205ENST00000555543 FFAR4Q5NUL3 377 aa14.62□□□□□ -0.07
VTI1B-205ENST00000555543 LGALS9CQ6DKI2 356 aa14.62□□□□□ -0.07
VTI1B-205ENST00000555543 EXOC3-AS1Q8N2X6 119 aa14.62□□□□□ -0.07
VTI1B-205ENST00000555543 MRPL53Q96EL3 112 aaKnown RBP14.62□□□□□ -0.07
VTI1B-205ENST00000555543 MRPL32Q9BYC8 188 aaKnown RBP14.62□□□□□ -0.07
VTI1B-205ENST00000555543 TIMM9Q9Y5J7 89 aa14.62□□□□□ -0.07
VTI1B-205ENST00000555543 IGHV4-4A0A075B6R2 117 aa14.61□□□□□ -0.07
VTI1B-205ENST00000555543 NPIPB6E9PJ23 425 aa14.61□□□□□ -0.07
VTI1B-205ENST00000555543 AZU1P20160 251 aa14.61□□□□□ -0.07
VTI1B-205ENST00000555543 Q5BKY6 102 aa14.61□□□□□ -0.07
VTI1B-205ENST00000555543 ASB13Q8WXK3 278 aa14.61□□□□□ -0.07
VTI1B-205ENST00000555543 DNAH6Q9C0G6 4158 aa14.6□□□□□ -0.07
VTI1B-205ENST00000555543 GIPP09681 153 aaPredicted RBP14.6□□□□□ -0.07
VTI1B-205ENST00000555543 OR10J4P0C629 311 aa14.6□□□□□ -0.07
VTI1B-205ENST00000555543 CT45A10P0DMU9 189 aa14.6□□□□□ -0.07
VTI1B-205ENST00000555543 TCTAP57738 103 aa14.6□□□□□ -0.07
VTI1B-205ENST00000555543 SCGB1C1Q8TD33 95 aa14.6□□□□□ -0.07
VTI1B-205ENST00000555543 FXYD5Q96DB9 178 aa14.6□□□□□ -0.07
VTI1B-205ENST00000555543 ZNF503Q96F45 646 aa14.6□□□□□ -0.07
VTI1B-205ENST00000555543 NIPSNAP3BQ9BS92 247 aa14.6□□□□□ -0.07
VTI1B-205ENST00000555543 OR51M1Q9H341 326 aa14.6□□□□□ -0.07
VTI1B-205ENST00000555543 TEX48A0A1B0GUV7 120 aa14.59□□□□□ -0.07
VTI1B-205ENST00000555543 PLAC8L1A1L4L8 177 aa14.59□□□□□ -0.07
VTI1B-205ENST00000555543 GFI1BQ5VTD9 330 aa14.59□□□□□ -0.07
VTI1B-205ENST00000555543 TMEM256Q8N2U0 113 aa14.59□□□□□ -0.07
VTI1B-205ENST00000555543 LINC01587Q99440 93 aa14.59□□□□□ -0.07
VTI1B-205ENST00000555543 PAXXQ9BUH6 204 aa14.59□□□□□ -0.07
VTI1B-205ENST00000555543 EIF3GO75821 320 aaKnown RBP eCLIP14.58□□□□□ -0.08
VTI1B-205ENST00000555543 NBEAP1P0C6P0 100 aa14.58□□□□□ -0.08
VTI1B-205ENST00000555543 TSPOP30536 169 aa14.58□□□□□ -0.08
VTI1B-205ENST00000555543 ERCC8Q13216 396 aa14.58□□□□□ -0.08
VTI1B-205ENST00000555543 ICAM4Q14773 271 aa14.58□□□□□ -0.08
VTI1B-205ENST00000555543 RNF141Q8WVD5 230 aa14.58□□□□□ -0.08
VTI1B-205ENST00000555543 PHYHIPLQ96FC7 376 aa14.58□□□□□ -0.08
VTI1B-205ENST00000555543 PRELID1Q9Y255 219 aa14.58□□□□□ -0.08
VTI1B-205ENST00000555543 J3KRW8 73 aa14.57□□□□□ -0.08
VTI1B-205ENST00000555543 OR7C2O60412 319 aa14.57□□□□□ -0.08
VTI1B-205ENST00000555543 TAS2R60P59551 318 aa14.57□□□□□ -0.08
VTI1B-205ENST00000555543 AQP10Q96PS8 301 aa14.57□□□□□ -0.08
VTI1B-205ENST00000555543 ODF3Q96PU9 254 aa14.57□□□□□ -0.08
VTI1B-205ENST00000555543 HTN1P15515 57 aa14.56□□□□□ -0.08
VTI1B-205ENST00000555543 FAM122CQ6P4D5 195 aa14.56□□□□□ -0.08
VTI1B-205ENST00000555543 AAMDCQ9H7C9 122 aa14.56□□□□□ -0.08
VTI1B-205ENST00000555543 BIRC6Q9NR09 4857 aa14.55□□□□□ -0.08
VTI1B-205ENST00000555543 IGKV2-40A0A087WW87 121 aaPredicted RBP14.55□□□□□ -0.08
VTI1B-205ENST00000555543 IGKV2D-40P01614 121 aaPredicted RBP14.55□□□□□ -0.08
VTI1B-205ENST00000555543 LEPP41159 167 aa14.55□□□□□ -0.08
VTI1B-205ENST00000555543 DAD1P61803 113 aa14.55□□□□□ -0.08
VTI1B-205ENST00000555543 UBE2L3P68036 154 aaKnown RBP14.55□□□□□ -0.08
VTI1B-205ENST00000555543 ZFP69Q49AA0 526 aa14.55□□□□□ -0.08
VTI1B-205ENST00000555543 C20orf144Q9BQM9 153 aa14.55□□□□□ -0.08
VTI1B-205ENST00000555543 AGPAT4-IT1Q9H0P7 198 aa14.55□□□□□ -0.08
VTI1B-205ENST00000555543 DNAH10Q8IVF4 4471 aa14.55□□□□□ -0.08
VTI1B-205ENST00000555543 H7BYZ3 331 aa14.54□□□□□ -0.08
VTI1B-205ENST00000555543 C1QBP02746 253 aa14.54□□□□□ -0.08
VTI1B-205ENST00000555543 HTN3P15516 51 aa14.54□□□□□ -0.08
VTI1B-205ENST00000555543 RAB2AP61019 212 aa14.54□□□□□ -0.08
VTI1B-205ENST00000555543 KHDC3LQ587J8 217 aa14.54□□□□□ -0.08
VTI1B-205ENST00000555543 OR2T35Q8NGX2 323 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms