RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 GOLT1BQ9Y3E0 138 aa9.79□□□□□ -0.84
SNX6-203ENST00000555416 ZNF705GA8MUZ8 300 aaPredicted RBP9.78□□□□□ -0.84
SNX6-203ENST00000555416 HIST1H1EP10412 219 aaKnown RBP9.78□□□□□ -0.84
SNX6-203ENST00000555416 FFAR4Q5NUL3 377 aa9.78□□□□□ -0.84
SNX6-203ENST00000555416 BLNKQ8WV28 456 aa9.78□□□□□ -0.84
SNX6-203ENST00000555416 ZNF503Q96F45 646 aa9.78□□□□□ -0.84
SNX6-203ENST00000555416 KLK5Q9Y337 293 aaPredicted RBP9.78□□□□□ -0.84
SNX6-203ENST00000555416 LOC102723971A0A1B0GUV8 181 aa9.77□□□□□ -0.85
SNX6-203ENST00000555416 SMIM9A6NGZ8 99 aa9.77□□□□□ -0.85
SNX6-203ENST00000555416 OR10J4P0C629 311 aa9.77□□□□□ -0.85
SNX6-203ENST00000555416 OXA1LQ15070 435 aa9.77□□□□□ -0.85
SNX6-203ENST00000555416 GUK1Q16774 197 aa9.77□□□□□ -0.85
SNX6-203ENST00000555416 RGS21Q2M5E4 152 aa9.77□□□□□ -0.85
SNX6-203ENST00000555416 EXOC3-AS1Q8N2X6 119 aa9.77□□□□□ -0.85
SNX6-203ENST00000555416 RPP25LQ8N5L8 163 aaKnown RBP9.77□□□□□ -0.85
SNX6-203ENST00000555416 G3V3Q6 166 aa9.76□□□□□ -0.85
SNX6-203ENST00000555416 ZNF253O75346 499 aa9.76□□□□□ -0.85
SNX6-203ENST00000555416 LY6G6CO95867 125 aa9.76□□□□□ -0.85
SNX6-203ENST00000555416 INSP01308 110 aa9.76□□□□□ -0.85
SNX6-203ENST00000555416 IFNA5P01569 189 aa9.76□□□□□ -0.85
SNX6-203ENST00000555416 HBE1P02100 147 aa9.76□□□□□ -0.85
SNX6-203ENST00000555416 AMBPP02760 352 aa9.76□□□□□ -0.85
SNX6-203ENST00000555416 GIPP09681 153 aaPredicted RBP9.76□□□□□ -0.85
SNX6-203ENST00000555416 CT45A10P0DMU9 189 aa9.76□□□□□ -0.85
SNX6-203ENST00000555416 AZU1P20160 251 aa9.76□□□□□ -0.85
SNX6-203ENST00000555416 ERCC8Q13216 396 aa9.76□□□□□ -0.85
SNX6-203ENST00000555416 FAM222AQ5U5X8 452 aa9.76□□□□□ -0.85
SNX6-203ENST00000555416 SCGB1C1Q8TD33 95 aa9.76□□□□□ -0.85
SNX6-203ENST00000555416 FXYD5Q96DB9 178 aa9.76□□□□□ -0.85
SNX6-203ENST00000555416 DKK2Q9UBU2 259 aa9.76□□□□□ -0.85
SNX6-203ENST00000555416 FUT9Q9Y231 359 aa9.76□□□□□ -0.85
SNX6-203ENST00000555416 YTHDF2Q9Y5A9 579 aaKnown RBP9.76□□□□□ -0.85
SNX6-203ENST00000555416 PLAC8L1A1L4L8 177 aa9.75□□□□□ -0.85
SNX6-203ENST00000555416 IGLL5B9A064 214 aa9.75□□□□□ -0.85
SNX6-203ENST00000555416 NPIPB6E9PJ23 425 aa9.75□□□□□ -0.85
SNX6-203ENST00000555416 C17orf112F2Z3M2 114 aa9.75□□□□□ -0.85
SNX6-203ENST00000555416 NBEAP1P0C6P0 100 aa9.75□□□□□ -0.85
SNX6-203ENST00000555416 RRN3P1Q2M238 152 aa9.75□□□□□ -0.85
SNX6-203ENST00000555416 OR10J6PQ8NGY7 276 aa9.75□□□□□ -0.85
SNX6-203ENST00000555416 C2CD4CQ8TF44 421 aa9.75□□□□□ -0.85
SNX6-203ENST00000555416 PHYHIPLQ96FC7 376 aa9.75□□□□□ -0.85
SNX6-203ENST00000555416 AQP10Q96PS8 301 aa9.75□□□□□ -0.85
SNX6-203ENST00000555416 TMEM208Q9BTX3 173 aa9.75□□□□□ -0.85
SNX6-203ENST00000555416 MRPL32Q9BYC8 188 aaKnown RBP9.75□□□□□ -0.85
SNX6-203ENST00000555416 OR51M1Q9H341 326 aa9.75□□□□□ -0.85
SNX6-203ENST00000555416 KCNIP2Q9NS61 270 aa9.75□□□□□ -0.85
SNX6-203ENST00000555416 TIMM9Q9Y5J7 89 aa9.75□□□□□ -0.85
SNX6-203ENST00000555416 TRAV10A0A0B4J240 114 aa9.74□□□□□ -0.85
SNX6-203ENST00000555416 CDKN1BP46527 198 aa9.74□□□□□ -0.85
SNX6-203ENST00000555416 RAB2AP61019 212 aa9.74□□□□□ -0.85
SNX6-203ENST00000555416 ICAM4Q14773 271 aa9.74□□□□□ -0.85
SNX6-203ENST00000555416 RNF141Q8WVD5 230 aa9.74□□□□□ -0.85
SNX6-203ENST00000555416 PAXXQ9BUH6 204 aa9.74□□□□□ -0.85
SNX6-203ENST00000555416 PPP1R14DQ9NXH3 145 aa9.74□□□□□ -0.85
SNX6-203ENST00000555416 APLNQ9ULZ1 77 aa9.74□□□□□ -0.85
SNX6-203ENST00000555416 IGKV2-40A0A087WW87 121 aaPredicted RBP9.73□□□□□ -0.85
SNX6-203ENST00000555416 DEFB131BA0A096LNP1 70 aa9.73□□□□□ -0.85
SNX6-203ENST00000555416 TMEM189A5PLL7 270 aa9.73□□□□□ -0.85
SNX6-203ENST00000555416 RNF222A6NCQ9 220 aa9.73□□□□□ -0.85
SNX6-203ENST00000555416 C11orf94C9JXX5 98 aa9.73□□□□□ -0.85
SNX6-203ENST00000555416 J3KRW8 73 aa9.73□□□□□ -0.85
SNX6-203ENST00000555416 OR7C2O60412 319 aa9.73□□□□□ -0.85
SNX6-203ENST00000555416 IGKV2D-40P01614 121 aaPredicted RBP9.73□□□□□ -0.85
SNX6-203ENST00000555416 SPART-AS1P0CW21 52 aa9.73□□□□□ -0.85
SNX6-203ENST00000555416 PDE6HQ13956 83 aa9.73□□□□□ -0.85
SNX6-203ENST00000555416 GFI1BQ5VTD9 330 aa9.73□□□□□ -0.85
SNX6-203ENST00000555416 FAM122CQ6P4D5 195 aa9.73□□□□□ -0.85
SNX6-203ENST00000555416 MRPL53Q96EL3 112 aaKnown RBP9.73□□□□□ -0.85
SNX6-203ENST00000555416 AGPAT4-IT1Q9H0P7 198 aa9.73□□□□□ -0.85
SNX6-203ENST00000555416 FXYD6-FXYD2A0A087WZ82 144 aa9.72□□□□□ -0.85
SNX6-203ENST00000555416 HSD17B11Q8NBQ5 300 aa9.72□□□□□ -0.85
SNX6-203ENST00000555416 OR2T35Q8NGX2 323 aa9.72□□□□□ -0.85
SNX6-203ENST00000555416 LINC01587Q99440 93 aa9.72□□□□□ -0.85
SNX6-203ENST00000555416 VGLL1Q99990 258 aa9.72□□□□□ -0.85
SNX6-203ENST00000555416 IGHV4-4A0A075B6R2 117 aa9.71□□□□□ -0.86
SNX6-203ENST00000555416 SMLR1H3BR10 107 aa9.71□□□□□ -0.86
SNX6-203ENST00000555416 HTN1P15515 57 aa9.71□□□□□ -0.86
SNX6-203ENST00000555416 FAM19A4Q96LR4 140 aa9.71□□□□□ -0.86
SNX6-203ENST00000555416 NIPSNAP3BQ9BS92 247 aa9.71□□□□□ -0.86
SNX6-203ENST00000555416 SH3BGRL3Q9H299 93 aa9.71□□□□□ -0.86
SNX6-203ENST00000555416 TNFSF18Q9UNG2 199 aa9.71□□□□□ -0.86
SNX6-203ENST00000555416 PRELID1Q9Y255 219 aa9.71□□□□□ -0.86
SNX6-203ENST00000555416 TRAV12-3A0A0B4J271 114 aa9.7□□□□□ -0.86
SNX6-203ENST00000555416 HMGB3O15347 200 aaKnown RBP9.7□□□□□ -0.86
SNX6-203ENST00000555416 M6PRP20645 277 aa9.7□□□□□ -0.86
SNX6-203ENST00000555416 ATP6V0CP27449 155 aa9.7□□□□□ -0.86
SNX6-203ENST00000555416 TSPOP30536 169 aa9.7□□□□□ -0.86
SNX6-203ENST00000555416 TAS2R60P59551 318 aa9.7□□□□□ -0.86
SNX6-203ENST00000555416 RANP62826 216 aaKnown RBP9.7□□□□□ -0.86
SNX6-203ENST00000555416 UBE2L3P68036 154 aaKnown RBP9.7□□□□□ -0.86
SNX6-203ENST00000555416 Q6ZQT7 251 aa9.7□□□□□ -0.86
SNX6-203ENST00000555416 ASB13Q8WXK3 278 aa9.7□□□□□ -0.86
SNX6-203ENST00000555416 ODF3Q96PU9 254 aa9.7□□□□□ -0.86
SNX6-203ENST00000555416 Q9H3A6 140 aa9.7□□□□□ -0.86
SNX6-203ENST00000555416 AAMDCQ9H7C9 122 aa9.7□□□□□ -0.86
SNX6-203ENST00000555416 KMT2AQ03164 3969 aa9.69□□□□□ -0.86
SNX6-203ENST00000555416 LEPP41159 167 aa9.69□□□□□ -0.86
SNX6-203ENST00000555416 CD300CQ08708 224 aa9.69□□□□□ -0.86
SNX6-203ENST00000555416 ACOT6Q3I5F7 207 aaPredicted RBP9.69□□□□□ -0.86
SNX6-203ENST00000555416 KHDC3LQ587J8 217 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms