RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 HIST1H1AQ02539 215 aaPredicted RBP7.71□□□□□ -1.17
NEK9-205ENST00000555405 OR5I1Q13606 314 aa7.71□□□□□ -1.17
NEK9-205ENST00000555405 LCN12Q6JVE5 192 aa7.71□□□□□ -1.17
NEK9-205ENST00000555405 NDUFA11Q86Y39 141 aa7.71□□□□□ -1.17
NEK9-205ENST00000555405 MS4A6AQ9H2W1 248 aa7.71□□□□□ -1.17
NEK9-205ENST00000555405 PPP1R14DQ9NXH3 145 aa7.71□□□□□ -1.17
NEK9-205ENST00000555405 TRRAPQ9Y4A5 3859 aa7.71□□□□□ -1.17
NEK9-205ENST00000555405 ZNF124Q15973 351 aa7.71□□□□□ -1.18
NEK9-205ENST00000555405 UQCC3Q6UW78 93 aa7.71□□□□□ -1.18
NEK9-205ENST00000555405 ADAMTSL5Q6ZMM2 481 aa7.71□□□□□ -1.18
NEK9-205ENST00000555405 TMEM158Q8WZ71 300 aa7.71□□□□□ -1.18
NEK9-205ENST00000555405 ATP6V0BQ99437 205 aa7.71□□□□□ -1.18
NEK9-205ENST00000555405 ADARB2-AS1A8MUL3 147 aa7.71□□□□□ -1.18
NEK9-205ENST00000555405 PDE6DO43924 150 aa7.71□□□□□ -1.18
NEK9-205ENST00000555405 BAGE2Q86Y30 109 aa7.71□□□□□ -1.18
NEK9-205ENST00000555405 FAM24BQ8N5W8 94 aa7.71□□□□□ -1.18
NEK9-205ENST00000555405 WIPF2Q8TF74 440 aaPredicted RBP7.71□□□□□ -1.18
NEK9-205ENST00000555405 ZNF331Q9NQX6 463 aaPredicted RBP7.71□□□□□ -1.18
NEK9-205ENST00000555405 TMEM14CQ9P0S9 112 aa7.71□□□□□ -1.18
NEK9-205ENST00000555405 RNF24Q9Y225 148 aa7.71□□□□□ -1.18
NEK9-205ENST00000555405 K7EMT4 169 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 GNG4P50150 75 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 DEFB131AP59861 70 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 ATRAIDQ6UW56 229 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 C5orf17Q8NAS9 161 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 OTORQ9NRC9 128 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 KRBOX1C9JBD0 128 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 MRPS12O15235 138 aaKnown RBP7.7□□□□□ -1.18
NEK9-205ENST00000555405 CSN3P07498 182 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 TAGLN2P37802 199 aaKnown RBP7.7□□□□□ -1.18
NEK9-205ENST00000555405 FXYD7P58549 80 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 PSG9Q00887 426 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 TMEM241Q24JQ0 296 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 CENPWQ5EE01 88 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 C1orf194Q5T5A4 169 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 TMEM88Q6PEY1 159 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 APRG1Q8IVJ8 170 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 VGLL1Q99990 258 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 URGCP-MRPS24S4R325 110 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 TCRAP04437 139 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 MYCNOSP40205 109 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 FAM90A2PQ658T7 463 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 C20orf173Q96LM9 149 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 U3KQE9 123 aa7.7□□□□□ -1.18
NEK9-205ENST00000555405 K7EQM0 130 aa7.69□□□□□ -1.18
NEK9-205ENST00000555405 NBEAL2Q6ZNJ1 2754 aa7.69□□□□□ -1.18
NEK9-205ENST00000555405 TMSB15BA0A087X1C1 80 aa7.69□□□□□ -1.18
NEK9-205ENST00000555405 KNCNA6PVL3 124 aa7.69□□□□□ -1.18
NEK9-205ENST00000555405 HTN1P15515 57 aa7.69□□□□□ -1.18
NEK9-205ENST00000555405 ID1P41134 155 aa7.69□□□□□ -1.18
NEK9-205ENST00000555405 GPR82Q96P67 336 aa7.69□□□□□ -1.18
NEK9-205ENST00000555405 IGLL1P15814 213 aa7.68□□□□□ -1.18
NEK9-205ENST00000555405 DEFB114Q30KQ6 69 aa7.68□□□□□ -1.18
NEK9-205ENST00000555405 REC114Q7Z4M0 266 aa7.68□□□□□ -1.18
NEK9-205ENST00000555405 OCC1Q8TAD7 63 aa7.68□□□□□ -1.18
NEK9-205ENST00000555405 LGALS9O00182 355 aa7.68□□□□□ -1.18
NEK9-205ENST00000555405 SNRPD3P62318 126 aaKnown RBP7.68□□□□□ -1.18
NEK9-205ENST00000555405 PSG3Q16557 428 aa7.68□□□□□ -1.18
NEK9-205ENST00000555405 ACTL10Q5JWF8 245 aa7.68□□□□□ -1.18
NEK9-205ENST00000555405 EIF4E3Q8N5X7 224 aaKnown RBP7.68□□□□□ -1.18
NEK9-205ENST00000555405 PKD1L1Q8TDX9 2849 aa7.68□□□□□ -1.18
NEK9-205ENST00000555405 TMEM250H0YL14 139 aa7.68□□□□□ -1.18
NEK9-205ENST00000555405 TVP23CQ96ET8 276 aa7.68□□□□□ -1.18
NEK9-205ENST00000555405 ATG101Q9BSB4 218 aa7.68□□□□□ -1.18
NEK9-205ENST00000555405 SEC11CQ9BY50 192 aa7.68□□□□□ -1.18
NEK9-205ENST00000555405 NKX6-2Q9C056 277 aaPredicted RBP7.68□□□□□ -1.18
NEK9-205ENST00000555405 TRBV20OR9-2A0A075B6H5 130 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 TRAV8-2A0A0B4J237 113 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 BTN1A1Q13410 526 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 MDFIQ99750 246 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 SLC50A1Q9BRV3 221 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 TPPP3Q9BW30 176 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 WFDC10AQ9H1F0 79 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 PSG8Q9UQ74 426 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 NBEAL1Q6ZS30 2694 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 DIRC3C9JPN6 131 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 SPINK4O60575 86 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 ERVFC1-1P60608 527 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 FLI1Q01543 452 aaPredicted RBP7.67□□□□□ -1.18
NEK9-205ENST00000555405 TMEM78Q5T7P6 136 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 SVBPQ8N300 66 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 OR10J6PQ8NGY7 276 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 ISOC2Q96AB3 205 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 CITED1Q99966 193 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 NAGKQ9UJ70 344 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 A8MWP6 167 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 CD7P09564 240 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 OXLD1Q5BKU9 147 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 GDF5OSQ5U4N7 250 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 HIST1H2BAQ96A08 127 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 C8orf49Q96NF6 230 aa7.67□□□□□ -1.18
NEK9-205ENST00000555405 RNASE7Q9H1E1 156 aaKnown RBP7.67□□□□□ -1.18
NEK9-205ENST00000555405 CCDC28AQ8IWP9 274 aa7.66□□□□□ -1.18
NEK9-205ENST00000555405 NAT8Q9UHE5 227 aa7.66□□□□□ -1.18
NEK9-205ENST00000555405 TIMM8BQ9Y5J9 83 aaPredicted RBP7.66□□□□□ -1.18
NEK9-205ENST00000555405 TCL1AP56279 114 aa7.66□□□□□ -1.18
NEK9-205ENST00000555405 FHL3Q13643 280 aa7.66□□□□□ -1.18
NEK9-205ENST00000555405 PDE6HQ13956 83 aa7.66□□□□□ -1.18
NEK9-205ENST00000555405 EBLN2Q6P2I7 272 aa7.66□□□□□ -1.18
NEK9-205ENST00000555405 CLRN3Q8NCR9 226 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms