RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 TMUB1Q9BVT8 246 aa18.58■□□□□ 0.56
STRN3-207ENST00000555358 TMEM191AQ9H0A3 160 aa18.58■□□□□ 0.56
STRN3-207ENST00000555358 CSMD1Q96PZ7 3565 aa18.58■□□□□ 0.56
STRN3-207ENST00000555358 PET117Q6UWS5 81 aa18.57■□□□□ 0.56
STRN3-207ENST00000555358 ASCL2Q99929 193 aa18.57■□□□□ 0.56
STRN3-207ENST00000555358 CBY1Q9Y3M2 126 aa18.57■□□□□ 0.56
STRN3-207ENST00000555358 BPIFA4PQ86YQ2 179 aa18.57■□□□□ 0.56
STRN3-207ENST00000555358 TMEM190Q8WZ59 177 aa18.57■□□□□ 0.56
STRN3-207ENST00000555358 MAP1LC3CQ9BXW4 147 aa18.57■□□□□ 0.56
STRN3-207ENST00000555358 IGHV4-30-2A0A087WSY4 118 aa18.56■□□□□ 0.56
STRN3-207ENST00000555358 CLEC2AQ6UVW9 174 aa18.56■□□□□ 0.56
STRN3-207ENST00000555358 DYNAPQ8N1N2 210 aa18.56■□□□□ 0.56
STRN3-207ENST00000555358 RNF5Q99942 180 aa18.56■□□□□ 0.56
STRN3-207ENST00000555358 SRSF8Q9BRL6 282 aaKnown RBP18.56■□□□□ 0.56
STRN3-207ENST00000555358 MPV17L2Q567V2 206 aa18.55■□□□□ 0.56
STRN3-207ENST00000555358 PTPN13Q12923 2485 aa18.55■□□□□ 0.56
STRN3-207ENST00000555358 MRPS12O15235 138 aaKnown RBP18.55■□□□□ 0.56
STRN3-207ENST00000555358 CRIP1P50238 77 aa18.55■□□□□ 0.56
STRN3-207ENST00000555358 FBLN7Q53RD9 439 aa18.55■□□□□ 0.56
STRN3-207ENST00000555358 CFHR4Q92496 578 aa18.55■□□□□ 0.56
STRN3-207ENST00000555358 SCRT2Q9NQ03 307 aa18.55■□□□□ 0.56
STRN3-207ENST00000555358 PSG8Q9UQ74 426 aa18.55■□□□□ 0.56
STRN3-207ENST00000555358 ANKRD17O75179 2603 aaKnown RBP18.55■□□□□ 0.56
STRN3-207ENST00000555358 HLA-DRB1P01911 266 aa18.54■□□□□ 0.56
STRN3-207ENST00000555358 CEACAM3P40198 252 aa18.54■□□□□ 0.56
STRN3-207ENST00000555358 PLGLAQ15195 96 aa18.54■□□□□ 0.56
STRN3-207ENST00000555358 ZNF491Q8N8L2 437 aa18.54■□□□□ 0.56
STRN3-207ENST00000555358 MCRIP2Q9BUT9 160 aaKnown RBP18.54■□□□□ 0.56
STRN3-207ENST00000555358 RNF24Q9Y225 148 aa18.54■□□□□ 0.56
STRN3-207ENST00000555358 CSN3P07498 182 aa18.54■□□□□ 0.56
STRN3-207ENST00000555358 RIGQ13278 110 aa18.54■□□□□ 0.56
STRN3-207ENST00000555358 PSG3Q16557 428 aa18.54■□□□□ 0.56
STRN3-207ENST00000555358 SLC25A34Q6PIV7 304 aa18.54■□□□□ 0.56
STRN3-207ENST00000555358 LYPD1Q8N2G4 141 aa18.54■□□□□ 0.56
STRN3-207ENST00000555358 HSPB8Q9UJY1 196 aa18.54■□□□□ 0.56
STRN3-207ENST00000555358 PRB4P10163 310 aaPredicted RBP18.53■□□□□ 0.56
STRN3-207ENST00000555358 NDUFS8O00217 210 aa18.52■□□□□ 0.56
STRN3-207ENST00000555358 LINC01545Q5VT33 79 aa18.52■□□□□ 0.56
STRN3-207ENST00000555358 RNF125Q96EQ8 232 aa18.52■□□□□ 0.56
STRN3-207ENST00000555358 ZNF414Q96IQ9 312 aa18.52■□□□□ 0.56
STRN3-207ENST00000555358 ZFHX3Q15911 3703 aa18.52■□□□□ 0.55
STRN3-207ENST00000555358 HSBP1L1C9JCN9 74 aa18.51■□□□□ 0.55
STRN3-207ENST00000555358 CNIH1O95406 144 aa18.51■□□□□ 0.55
STRN3-207ENST00000555358 TENM4Q6N022 2769 aa18.51■□□□□ 0.55
STRN3-207ENST00000555358 CELSR1Q9NYQ6 3014 aa18.51■□□□□ 0.55
STRN3-207ENST00000555358 K7EQM0 130 aa18.51■□□□□ 0.55
STRN3-207ENST00000555358 BVES-AS1Q5T3Y7 98 aa18.51■□□□□ 0.55
STRN3-207ENST00000555358 ABCA12Q86UK0 2595 aa18.51■□□□□ 0.55
STRN3-207ENST00000555358 A0A1B0GW15 77 aa18.5■□□□□ 0.55
STRN3-207ENST00000555358 IL4P05112 153 aa18.5■□□□□ 0.55
STRN3-207ENST00000555358 KRTAP10-9P60411 292 aa18.5■□□□□ 0.55
STRN3-207ENST00000555358 MS4A6AQ9H2W1 248 aa18.5■□□□□ 0.55
STRN3-207ENST00000555358 AP5S1Q9NUS5 200 aa18.5■□□□□ 0.55
STRN3-207ENST00000555358 NBPF19A0A087WUL8 3843 aa18.5■□□□□ 0.55
STRN3-207ENST00000555358 WI2-2373I1.2A0A1W2PRP0 233 aa18.5■□□□□ 0.55
STRN3-207ENST00000555358 M0R3E3 92 aa18.5■□□□□ 0.55
STRN3-207ENST00000555358 NUDT3O95989 172 aa18.5■□□□□ 0.55
STRN3-207ENST00000555358 DOPEY2Q9Y3R5 2298 aa18.49■□□□□ 0.55
STRN3-207ENST00000555358 H0Y8G0 127 aa18.49■□□□□ 0.55
STRN3-207ENST00000555358 RNASE8Q8TDE3 154 aaKnown RBP18.49■□□□□ 0.55
STRN3-207ENST00000555358 TAX1BP3O14907 124 aa18.49■□□□□ 0.55
STRN3-207ENST00000555358 Q6AWC8 147 aa18.49■□□□□ 0.55
STRN3-207ENST00000555358 BCL6BQ8N143 479 aaPredicted RBP18.49■□□□□ 0.55
STRN3-207ENST00000555358 PMCHL2Q9BQD1 86 aa18.49■□□□□ 0.55
STRN3-207ENST00000555358 ZNF747Q9BV97 191 aa18.49■□□□□ 0.55
STRN3-207ENST00000555358 UBE2E1P51965 193 aa18.48■□□□□ 0.55
STRN3-207ENST00000555358 ZNF493Q6ZR52 646 aa18.48■□□□□ 0.55
STRN3-207ENST00000555358 C8orf49Q96NF6 230 aa18.48■□□□□ 0.55
STRN3-207ENST00000555358 FCGR2BP31994 310 aaPredicted RBP18.47■□□□□ 0.55
STRN3-207ENST00000555358 HES1Q14469 280 aa18.47■□□□□ 0.55
STRN3-207ENST00000555358 MINOS1Q5TGZ0 78 aa18.47■□□□□ 0.55
STRN3-207ENST00000555358 AJUBAQ96IF1 538 aa18.47■□□□□ 0.55
STRN3-207ENST00000555358 MINOS1-NBL1R4GNA1 71 aa18.47■□□□□ 0.55
STRN3-207ENST00000555358 K7EP13 123 aa18.47■□□□□ 0.55
STRN3-207ENST00000555358 NBR2O15453 112 aa18.47■□□□□ 0.55
STRN3-207ENST00000555358 TIMM8BQ9Y5J9 83 aaPredicted RBP18.47■□□□□ 0.55
STRN3-207ENST00000555358 KLF17Q5JT82 389 aaPredicted RBP18.46■□□□□ 0.55
STRN3-207ENST00000555358 PAX8Q06710 450 aa18.46■□□□□ 0.55
STRN3-207ENST00000555358 DEFB125Q8N687 156 aa18.46■□□□□ 0.55
STRN3-207ENST00000555358 S4R3C0 116 aa18.46■□□□□ 0.55
STRN3-207ENST00000555358 NCR2O95944 276 aa18.45■□□□□ 0.54
STRN3-207ENST00000555358 SAA4P35542 130 aa18.45■□□□□ 0.54
STRN3-207ENST00000555358 FA2HQ7L5A8 372 aa18.45■□□□□ 0.54
STRN3-207ENST00000555358 TPPP3Q9BW30 176 aa18.45■□□□□ 0.54
STRN3-207ENST00000555358 A0A096LNJ9 63 aa18.45■□□□□ 0.54
STRN3-207ENST00000555358 MUC21A0A0G2JKD1 596 aa18.45■□□□□ 0.54
STRN3-207ENST00000555358 MUC21A0A140T8X8 626 aa18.45■□□□□ 0.54
STRN3-207ENST00000555358 NDUFA3O95167 84 aa18.45■□□□□ 0.54
STRN3-207ENST00000555358 PDE6HQ13956 83 aa18.45■□□□□ 0.54
STRN3-207ENST00000555358 MUC21Q5SSG8 566 aa18.45■□□□□ 0.54
STRN3-207ENST00000555358 CCDC144NLQ6NUI1 221 aa18.45■□□□□ 0.54
STRN3-207ENST00000555358 C12orf54Q6X4T0 127 aa18.45■□□□□ 0.54
STRN3-207ENST00000555358 PIP4P2Q8N4L2 257 aa18.45■□□□□ 0.54
STRN3-207ENST00000555358 OR10AG1Q8NH19 301 aa18.45■□□□□ 0.54
STRN3-207ENST00000555358 PRSS3P2Q8NHM4 247 aa18.45■□□□□ 0.54
STRN3-207ENST00000555358 CENPVL3A0A0U1RRI6 287 aa18.44■□□□□ 0.54
STRN3-207ENST00000555358 FAM106CPP0CH98 169 aa18.44■□□□□ 0.54
STRN3-207ENST00000555358 FAM106AQ4KMX7 169 aa18.44■□□□□ 0.54
STRN3-207ENST00000555358 NPBQ8NG41 125 aa18.44■□□□□ 0.54
STRN3-207ENST00000555358 IGHV3OR16-10A0A075B7F0 116 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms