RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 RELQ04864 619 aaPredicted RBP8.75□□□□□ -1.01
SRP54-205ENST00000554803 SLAQ13239 276 aa8.75□□□□□ -1.01
SRP54-205ENST00000554803 BEAN1Q3B7T3 259 aa8.75□□□□□ -1.01
SRP54-205ENST00000554803 ZNF48Q96MX3 618 aaPredicted RBP8.75□□□□□ -1.01
SRP54-205ENST00000554803 PMCHL2Q9BQD1 86 aa8.75□□□□□ -1.01
SRP54-205ENST00000554803 FAM103A1Q9BTL3 118 aaKnown RBP8.75□□□□□ -1.01
SRP54-205ENST00000554803 MS4A6AQ9H2W1 248 aa8.75□□□□□ -1.01
SRP54-205ENST00000554803 HSPB8Q9UJY1 196 aa8.75□□□□□ -1.01
SRP54-205ENST00000554803 HIGD1AQ9Y241 93 aa8.75□□□□□ -1.01
SRP54-205ENST00000554803 F11RQ9Y624 299 aaKnown RBP8.75□□□□□ -1.01
SRP54-205ENST00000554803 DNAH9Q9NYC9 4486 aa8.75□□□□□ -1.01
SRP54-205ENST00000554803 TRAV30A0A087WSZ9 112 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 A0A1W2PPI3 338 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 PGPA6NDG6 321 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 CGB1A6NKQ9 187 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 F2Z2F3 143 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 HLA-DRB1P01911 266 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 IGHV1-8P0DP01 117 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 MYOD1P15172 320 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 PDE6HQ13956 83 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 C16orf54Q6UWD8 224 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 MOB3BQ86TA1 216 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 KIR3DL3Q8N743 410 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 TMEM75Q8N9X5 138 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 H1FXQ92522 213 aaKnown RBP8.74□□□□□ -1.01
SRP54-205ENST00000554803 DPF1Q92782 380 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 RCHY1Q96PM5 261 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 TMEM191AQ9H0A3 160 aa8.74□□□□□ -1.01
SRP54-205ENST00000554803 HSBP1L1C9JCN9 74 aa8.73□□□□□ -1.01
SRP54-205ENST00000554803 PYYP10082 97 aa8.73□□□□□ -1.01
SRP54-205ENST00000554803 NTF3P20783 257 aa8.73□□□□□ -1.01
SRP54-205ENST00000554803 TSPOP30536 169 aa8.73□□□□□ -1.01
SRP54-205ENST00000554803 RIGQ13278 110 aa8.73□□□□□ -1.01
SRP54-205ENST00000554803 KPRPQ5T749 579 aaPredicted RBP8.73□□□□□ -1.01
SRP54-205ENST00000554803 CLEC7AQ9BXN2 247 aa8.73□□□□□ -1.01
SRP54-205ENST00000554803 SIGLEC9Q9Y336 463 aa8.73□□□□□ -1.01
SRP54-205ENST00000554803 TRAV5A0A0B4J249 113 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 C2orf70A6NJV1 201 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 CHEK1O14757 476 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 SLC25A17O43808 307 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 CCL3L1P16619 93 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 PLGLAQ15195 96 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 TNXAQ16473 311 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 TDRG1Q3Y452 100 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 UTF1Q5T230 341 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 SPATA12Q7Z6I5 190 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 Q86TA4 180 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 PPP1R27Q86WC6 154 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 BPIFA4PQ86YQ2 179 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 BCL6BQ8N143 479 aaPredicted RBP8.72□□□□□ -1.01
SRP54-205ENST00000554803 ZNF738Q8NE65 137 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 OR4F17Q8NGA8 305 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 OR1B1Q8NGR6 318 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 Q9H3A6 140 aa8.72□□□□□ -1.01
SRP54-205ENST00000554803 RYR2Q92736 4967 aa8.71□□□□□ -1.01
SRP54-205ENST00000554803 LOC102724200A0A096LPH7 203 aaPredicted RBP8.71□□□□□ -1.02
SRP54-205ENST00000554803 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.71□□□□□ -1.02
SRP54-205ENST00000554803 G3V4G9 280 aa8.71□□□□□ -1.02
SRP54-205ENST00000554803 SPINK4O60575 86 aa8.71□□□□□ -1.02
SRP54-205ENST00000554803 MOSP00540 346 aa8.71□□□□□ -1.02
SRP54-205ENST00000554803 IGLV1-47P01700 117 aa8.71□□□□□ -1.02
SRP54-205ENST00000554803 PRB2P02812 416 aaPredicted RBP8.71□□□□□ -1.02
SRP54-205ENST00000554803 ORM2P19652 201 aa8.71□□□□□ -1.02
SRP54-205ENST00000554803 G0S2P27469 103 aa8.71□□□□□ -1.02
SRP54-205ENST00000554803 KRTAP10-3P60369 221 aa8.71□□□□□ -1.02
SRP54-205ENST00000554803 KIAA1644Q3SXP7 199 aa8.71□□□□□ -1.02
SRP54-205ENST00000554803 KLF17Q5JT82 389 aaPredicted RBP8.71□□□□□ -1.02
SRP54-205ENST00000554803 MORN5Q5VZ52 161 aa8.71□□□□□ -1.02
SRP54-205ENST00000554803 RNASEKQ6P5S7 137 aaKnown RBP8.71□□□□□ -1.02
SRP54-205ENST00000554803 SSBP3Q9BWW4 388 aaPredicted RBP8.71□□□□□ -1.02
SRP54-205ENST00000554803 MAP1LC3CQ9BXW4 147 aa8.71□□□□□ -1.02
SRP54-205ENST00000554803 KRTAP17-1Q9BYP8 105 aa8.71□□□□□ -1.02
SRP54-205ENST00000554803 A0A1B0GUT8 65 aa8.7□□□□□ -1.02
SRP54-205ENST00000554803 LEPROTL1O95214 131 aa8.7□□□□□ -1.02
SRP54-205ENST00000554803 FRMD6-AS1P0C7T7 363 aa8.7□□□□□ -1.02
SRP54-205ENST00000554803 PPIAL4GP0DN37 164 aa8.7□□□□□ -1.02
SRP54-205ENST00000554803 SLC35B1P78383 322 aa8.7□□□□□ -1.02
SRP54-205ENST00000554803 MLANAQ16655 118 aa8.7□□□□□ -1.02
SRP54-205ENST00000554803 LINC01559Q495D7 138 aa8.7□□□□□ -1.02
SRP54-205ENST00000554803 FAM110DQ8TAY7 271 aaPredicted RBP8.7□□□□□ -1.02
SRP54-205ENST00000554803 MRAPQ8TCY5 172 aa8.7□□□□□ -1.02
SRP54-205ENST00000554803 RASL11BQ9BPW5 248 aa8.7□□□□□ -1.02
SRP54-205ENST00000554803 NPFFR1Q9GZQ6 430 aa8.7□□□□□ -1.02
SRP54-205ENST00000554803 INSIG2Q9Y5U4 225 aa8.7□□□□□ -1.02
SRP54-205ENST00000554803 CLPSL1A2RUU4 121 aa8.69□□□□□ -1.02
SRP54-205ENST00000554803 BUB1B-PAK6H3BSN5 160 aa8.69□□□□□ -1.02
SRP54-205ENST00000554803 SYS1-DBNDD2H3BUS1 97 aa8.69□□□□□ -1.02
SRP54-205ENST00000554803 IGLC1P0CG04 106 aa8.69□□□□□ -1.02
SRP54-205ENST00000554803 CD33P20138 364 aa8.69□□□□□ -1.02
SRP54-205ENST00000554803 CEACAM3P40198 252 aa8.69□□□□□ -1.02
SRP54-205ENST00000554803 CSN1S1P47710 185 aa8.69□□□□□ -1.02
SRP54-205ENST00000554803 DLX1P56177 255 aa8.69□□□□□ -1.02
SRP54-205ENST00000554803 MRGPRG-AS1Q2M3A8 158 aa8.69□□□□□ -1.02
SRP54-205ENST00000554803 SAMD5Q5TGI4 173 aa8.69□□□□□ -1.02
SRP54-205ENST00000554803 PRR27Q6MZM9 219 aa8.69□□□□□ -1.02
SRP54-205ENST00000554803 COX8CQ7Z4L0 72 aa8.69□□□□□ -1.02
SRP54-205ENST00000554803 C11orf42Q8N5U0 333 aa8.69□□□□□ -1.02
SRP54-205ENST00000554803 LY6G5BQ8NDX9 201 aa8.69□□□□□ -1.02
SRP54-205ENST00000554803 LINC00479Q96M42 142 aa8.69□□□□□ -1.02
SRP54-205ENST00000554803 SHANK2-AS3Q9BTD1 123 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms