RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 PSMG3Q9BT73 122 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-208ENST00000554739 M0R3E3 92 aa9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 CRXO43186 299 aaPredicted RBP9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 EIF3GO75821 320 aaKnown RBP eCLIP9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 OR10J4P0C629 311 aa9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 SERF2P84101 59 aa9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 SPINK13Q1W4C9 94 aa9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 C1orf158Q8N1D5 194 aa9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 EXOC3-AS1Q8N2X6 119 aa9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 RPP25LQ8N5L8 163 aaKnown RBP9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 OR11H4Q8NGC9 324 aa9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 OR10G4Q8NGN3 311 aa9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 OR10G9Q8NGN4 311 aa9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 OR10G7Q8NGN6 311 aa9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 MRPL53Q96EL3 112 aaKnown RBP9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 IGF2BP2-AS1Q96M15 143 aa9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 NEU1Q99519 415 aa9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 CYTL1Q9NRR1 136 aa9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 RYR3Q15413 4870 aa9.33□□□□□ -0.92
MTHFD1-208ENST00000554739 BORCS7-ASMTA0A0B4J1R7 106 aa9.32□□□□□ -0.92
MTHFD1-208ENST00000554739 HMSDA8MTL9 139 aa9.32□□□□□ -0.92
MTHFD1-208ENST00000554739 M0R2Z0 102 aa9.32□□□□□ -0.92
MTHFD1-208ENST00000554739 TAAR5O14804 337 aa9.32□□□□□ -0.92
MTHFD1-208ENST00000554739 OR7C2O60412 319 aa9.32□□□□□ -0.92
MTHFD1-208ENST00000554739 AMBPP02760 352 aa9.32□□□□□ -0.92
MTHFD1-208ENST00000554739 TAS2R45P59539 299 aa9.32□□□□□ -0.92
MTHFD1-208ENST00000554739 OR10J6PQ8NGY7 276 aa9.32□□□□□ -0.92
MTHFD1-208ENST00000554739 SH3BGRL3Q9H299 93 aa9.32□□□□□ -0.92
MTHFD1-208ENST00000554739 PRELID1Q9Y255 219 aa9.32□□□□□ -0.92
MTHFD1-208ENST00000554739 DNAH1Q9P2D7 4330 aa9.32□□□□□ -0.92
MTHFD1-208ENST00000554739 A0A1W2PPV4 95 aa9.31□□□□□ -0.92
MTHFD1-208ENST00000554739 SMIM9A6NGZ8 99 aa9.31□□□□□ -0.92
MTHFD1-208ENST00000554739 NPIPB6E9PJ23 425 aa9.31□□□□□ -0.92
MTHFD1-208ENST00000554739 BOLA2-SMG1P6H3BVE0 249 aa9.31□□□□□ -0.92
MTHFD1-208ENST00000554739 JTBO76095 146 aa9.31□□□□□ -0.92
MTHFD1-208ENST00000554739 MBP02144 154 aa9.31□□□□□ -0.92
MTHFD1-208ENST00000554739 ICAM4Q14773 271 aa9.31□□□□□ -0.92
MTHFD1-208ENST00000554739 KHDC3LQ587J8 217 aa9.31□□□□□ -0.92
MTHFD1-208ENST00000554739 FAM122CQ6P4D5 195 aa9.31□□□□□ -0.92
MTHFD1-208ENST00000554739 GNPNAT1Q96EK6 184 aaPredicted RBP9.31□□□□□ -0.92
MTHFD1-208ENST00000554739 PHYHIPLQ96FC7 376 aa9.31□□□□□ -0.92
MTHFD1-208ENST00000554739 AAMDCQ9H7C9 122 aa9.31□□□□□ -0.92
MTHFD1-208ENST00000554739 PPP1R14DQ9NXH3 145 aa9.31□□□□□ -0.92
MTHFD1-208ENST00000554739 GOLT1BQ9Y3E0 138 aa9.31□□□□□ -0.92
MTHFD1-208ENST00000554739 TRAV12-2A0A075B6T6 113 aa9.3□□□□□ -0.92
MTHFD1-208ENST00000554739 IGHV3OR16-12A0A075B7B8 117 aa9.3□□□□□ -0.92
MTHFD1-208ENST00000554739 CT45A10P0DMU9 189 aa9.3□□□□□ -0.92
MTHFD1-208ENST00000554739 RANP62826 216 aaKnown RBP9.3□□□□□ -0.92
MTHFD1-208ENST00000554739 UBE2L3P68036 154 aaKnown RBP9.3□□□□□ -0.92
MTHFD1-208ENST00000554739 LYPD1Q8N2G4 141 aa9.3□□□□□ -0.92
MTHFD1-208ENST00000554739 KCNRGQ8N5I3 272 aa9.3□□□□□ -0.92
MTHFD1-208ENST00000554739 C11orf45Q8TAV5 145 aa9.3□□□□□ -0.92
MTHFD1-208ENST00000554739 ST6GAL2Q96JF0 529 aa9.3□□□□□ -0.92
MTHFD1-208ENST00000554739 CXorf65A6NEN9 183 aa9.29□□□□□ -0.92
MTHFD1-208ENST00000554739 HMGB3O15347 200 aaKnown RBP9.29□□□□□ -0.92
MTHFD1-208ENST00000554739 INSP01308 110 aa9.29□□□□□ -0.92
MTHFD1-208ENST00000554739 STAG3L2P0CL84 134 aa9.29□□□□□ -0.92
MTHFD1-208ENST00000554739 STAG3L3P0CL85 134 aa9.29□□□□□ -0.92
MTHFD1-208ENST00000554739 CDKN1BP46527 198 aa9.29□□□□□ -0.92
MTHFD1-208ENST00000554739 NANOS2P60321 138 aaKnown RBP9.29□□□□□ -0.92
MTHFD1-208ENST00000554739 ZNF345Q14585 488 aa9.29□□□□□ -0.92
MTHFD1-208ENST00000554739 KIR3DS1Q14943 382 aa9.29□□□□□ -0.92
MTHFD1-208ENST00000554739 PQLC2Q6ZP29 291 aa9.29□□□□□ -0.92
MTHFD1-208ENST00000554739 BAP18Q8IXM2 172 aa9.29□□□□□ -0.92
MTHFD1-208ENST00000554739 RAB24Q969Q5 203 aa9.29□□□□□ -0.92
MTHFD1-208ENST00000554739 AGPAT4-IT1Q9H0P7 198 aa9.29□□□□□ -0.92
MTHFD1-208ENST00000554739 LYSTQ99698 3801 aa9.29□□□□□ -0.92
MTHFD1-208ENST00000554739 TSPOP30536 169 aa9.28□□□□□ -0.92
MTHFD1-208ENST00000554739 CDC34P49427 236 aaPredicted RBP9.28□□□□□ -0.92
MTHFD1-208ENST00000554739 ERCC8Q13216 396 aa9.28□□□□□ -0.92
MTHFD1-208ENST00000554739 PMS2P11Q13670 270 aa9.28□□□□□ -0.92
MTHFD1-208ENST00000554739 LINC00477Q96M19 166 aa9.28□□□□□ -0.92
MTHFD1-208ENST00000554739 ODF3Q96PU9 254 aa9.28□□□□□ -0.92
MTHFD1-208ENST00000554739 TMEM208Q9BTX3 173 aa9.28□□□□□ -0.92
MTHFD1-208ENST00000554739 ACTR3CQ9C0K3 210 aaPredicted RBP9.28□□□□□ -0.92
MTHFD1-208ENST00000554739 Q9H3A6 140 aa9.28□□□□□ -0.92
MTHFD1-208ENST00000554739 A0A0D9SG52 128 aa9.27□□□□□ -0.93
MTHFD1-208ENST00000554739 HBE1P02100 147 aa9.27□□□□□ -0.93
MTHFD1-208ENST00000554739 PRM2P04554 102 aa9.27□□□□□ -0.93
MTHFD1-208ENST00000554739 ARL14EPLP0DKL9 152 aa9.27□□□□□ -0.93
MTHFD1-208ENST00000554739 CEMP1Q6PRD7 247 aaPredicted RBP9.27□□□□□ -0.93
MTHFD1-208ENST00000554739 C9orf47Q6ZRZ4 202 aa9.27□□□□□ -0.93
MTHFD1-208ENST00000554739 SUN5Q8TC36 379 aa9.27□□□□□ -0.93
MTHFD1-208ENST00000554739 FAM19A4Q96LR4 140 aa9.27□□□□□ -0.93
MTHFD1-208ENST00000554739 VGLL1Q99990 258 aa9.27□□□□□ -0.93
MTHFD1-208ENST00000554739 ARPC5LQ9BPX5 153 aa9.27□□□□□ -0.93
MTHFD1-208ENST00000554739 RYR2Q92736 4967 aa9.27□□□□□ -0.93
MTHFD1-208ENST00000554739 IGKV2-40A0A087WW87 121 aaPredicted RBP9.26□□□□□ -0.93
MTHFD1-208ENST00000554739 TMEM189A5PLL7 270 aa9.26□□□□□ -0.93
MTHFD1-208ENST00000554739 IGKV2D-40P01614 121 aaPredicted RBP9.26□□□□□ -0.93
MTHFD1-208ENST00000554739 LEPP41159 167 aa9.26□□□□□ -0.93
MTHFD1-208ENST00000554739 ZNF726P1Q15940 193 aa9.26□□□□□ -0.93
MTHFD1-208ENST00000554739 RRN3P1Q2M238 152 aa9.26□□□□□ -0.93
MTHFD1-208ENST00000554739 GFI1BQ5VTD9 330 aa9.26□□□□□ -0.93
MTHFD1-208ENST00000554739 SSX7Q7RTT5 188 aa9.26□□□□□ -0.93
MTHFD1-208ENST00000554739 TCTE3Q8IZS6 198 aa9.26□□□□□ -0.93
MTHFD1-208ENST00000554739 PHLDA1Q8WV24 401 aaPredicted RBP9.26□□□□□ -0.93
MTHFD1-208ENST00000554739 LINC01587Q99440 93 aa9.26□□□□□ -0.93
MTHFD1-208ENST00000554739 OTORQ9NRC9 128 aa9.26□□□□□ -0.93
MTHFD1-208ENST00000554739 CELA1Q9UNI1 258 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms