RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 A0A0G2JRQ6 117 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 LRCOL1A6NCL2 159 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 GABARAPH6UMI1 98 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 CTDSPLO15194 276 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 ZNF324O75467 553 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-229ENST00000554672 OR5AC1P0C628 307 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 CDKN1BP46527 198 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 NCS1P62166 190 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 MRPS10P82664 201 aaKnown RBP3.22□□□□□ -1.89
ATXN3-229ENST00000554672 HIST1H1AQ02539 215 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-229ENST00000554672 DAZ2Q13117 558 aaKnown RBP3.22□□□□□ -1.89
ATXN3-229ENST00000554672 SLAQ13239 276 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 OR2F1Q13607 317 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 SP6Q3SY56 376 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 NMSQ5H8A3 153 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 C10orf126Q8N4M7 172 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 ARRDC1Q8N5I2 433 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 SAMD12Q8N8I0 201 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 ZNF738Q8NE65 137 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 OR8A1Q8NGG7 326 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 SLC35E1Q96K37 410 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 SLC25A22Q9H936 323 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 COPZ2Q9P299 210 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 ICOSQ9Y6W8 199 aa3.22□□□□□ -1.89
ATXN3-229ENST00000554672 LRP1Q07954 4544 aaKnown RBP3.21□□□□□ -1.9
ATXN3-229ENST00000554672 SMIM31A0A1B0GVY4 71 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 PSCAO43653 123 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 CDS2O95674 445 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 TMBIM6P55061 237 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 VBP1P61758 197 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 FGL1Q08830 312 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 MRPL23Q16540 153 aaKnown RBP3.21□□□□□ -1.9
ATXN3-229ENST00000554672 PSG3Q16557 428 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 STEAP1BQ6NZ63 245 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 Q6ZTI0 123 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 LGI3Q8N145 548 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 RNF182Q8N6D2 247 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 Q8N814 137 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 CCDC71LQ8N9Z2 235 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 ZFAND1Q8TCF1 268 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 AP3S1Q92572 193 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 TRGV9Q99603 122 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 LINC00467Q9BRT7 94 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 MRPS26Q9BYN8 205 aaKnown RBP3.21□□□□□ -1.9
ATXN3-229ENST00000554672 CTDSP1Q9GZU7 261 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 MIXL1Q9H2W2 232 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 CACNG5Q9UF02 275 aa3.21□□□□□ -1.9
ATXN3-229ENST00000554672 DNAH8Q96JB1 4490 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 TRAV5A0A0B4J249 113 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 TEX13DA0A0J9YY54 714 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-229ENST00000554672 CRYGDP07320 174 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 RPL7P18124 248 aaKnown RBP3.2□□□□□ -1.9
ATXN3-229ENST00000554672 ORM2P19652 201 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 CXCL3P19876 107 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 KRTAP10-4P60372 401 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-229ENST00000554672 LSM3P62310 102 aaKnown RBP3.2□□□□□ -1.9
ATXN3-229ENST00000554672 SURF2Q15527 256 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-229ENST00000554672 Q6ZSA8 131 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 NEGR1Q7Z3B1 354 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 SELENOHQ8IZQ5 122 aaKnown RBP3.2□□□□□ -1.9
ATXN3-229ENST00000554672 TMEM229BQ8NBD8 167 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 OR52I2Q8NH67 350 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 TERB2Q8NHR7 220 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 LRRC20Q8TCA0 184 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 DYNC2LI1Q8TCX1 351 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 GLYATL2Q8WU03 294 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 RAB2BQ8WUD1 216 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 SMIM4Q8WVI0 70 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 DEDD2Q8WXF8 326 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 RBPMSQ93062 196 aaKnown RBP3.2□□□□□ -1.9
ATXN3-229ENST00000554672 PYGO2Q9BRQ0 406 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 TMEM147Q9BVK8 224 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 NAA50Q9GZZ1 169 aaKnown RBP3.2□□□□□ -1.9
ATXN3-229ENST00000554672 TMEM222Q9H0R3 208 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 CCDC59Q9P031 241 aaKnown RBP3.2□□□□□ -1.9
ATXN3-229ENST00000554672 COMMD3Q9UBI1 195 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 PRO0255Q9UI72 69 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 HHLA3Q9XRX5 114 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 TMEM56-RWDD3S4R434 201 aa3.2□□□□□ -1.9
ATXN3-229ENST00000554672 TRGV1A0A0A0MS02 117 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 GAGE12JA6NER3 117 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 CTDSP2O14595 271 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 HPGDSO60760 199 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 PRAF2O60831 178 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 GAS8-AS1O95177 125 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 SULT1A3P0DMM9 295 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 SULT1A4P0DMN0 295 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 CRYBA4P53673 196 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 RAB11AP62491 216 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 ZNF415Q09FC8 603 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 ASAH1Q13510 395 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 MEF2DQ14814 521 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 SPCS2Q15005 226 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 BAK1Q16611 211 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 ACOT6Q3I5F7 207 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-229ENST00000554672 TDRG1Q3Y452 100 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 GFI1BQ5VTD9 330 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 LRTM2Q8N967 370 aa3.19□□□□□ -1.9
ATXN3-229ENST00000554672 THAP8Q8NA92 274 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms