RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 TRAV6A0A075B6T7 132 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 TRAV8-2A0A0B4J237 113 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 ZNF98A6NK75 572 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 CENPXA8MT69 81 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 A8MTW9 85 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 SNRPGP15A8MWD9 76 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 SMIM1B2RUZ4 78 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 FNDC10F2Z333 226 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 K7EPK0 472 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 CCSO14618 274 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 TSC22D2O75157 780 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 CFDP00746 253 aaPredicted RBP2.97□□□□□ -1.93
VTI1B-203ENST00000554636 IFNA21P01568 189 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 TCRBP04435 133 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 METTL15P1P0C7V9 234 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 PSMB3P49720 205 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 PLP1P60201 277 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 SNRPD3P62318 126 aaKnown RBP2.97□□□□□ -1.93
VTI1B-203ENST00000554636 DLK1P80370 383 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 AKR1C1Q04828 323 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 GAGE5Q13069 117 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 GAGE6Q13070 117 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 IAH1Q2TAA2 248 aaPredicted RBP2.97□□□□□ -1.93
VTI1B-203ENST00000554636 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 FOXI2Q6ZQN5 318 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 CYP2G1PQ6ZSU1 146 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 ZNF709Q8N972 641 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 OR1B1Q8NGR6 318 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 C11orf45Q8TAV5 145 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 ZNF431Q8TF32 576 aaPredicted RBP2.97□□□□□ -1.93
VTI1B-203ENST00000554636 SMIM8Q96KF7 97 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 LINC00052Q96N35 136 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 SEC22CQ9BRL7 303 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 TMEM147Q9BVK8 224 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 SCRT1Q9BWW7 348 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 HRH4Q9H3N8 390 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 PSENENQ9NZ42 101 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 FBXL17Q9UF56 701 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 CELA1Q9UNI1 258 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 KLK5Q9Y337 293 aaPredicted RBP2.97□□□□□ -1.93
VTI1B-203ENST00000554636 DNAH5Q8TE73 4624 aa2.97□□□□□ -1.93
VTI1B-203ENST00000554636 LRP1BQ9NZR2 4599 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 A0A0J9YX75 114 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 SMCO3A2RU48 225 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 C7orf66A4D0T2 115 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 ZNF705FA8MVS1 300 aaPredicted RBP2.96□□□□□ -1.94
VTI1B-203ENST00000554636 F6UB75 175 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 ISLRO14498 428 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 MRPS12O15235 138 aaKnown RBP2.96□□□□□ -1.94
VTI1B-203ENST00000554636 DEDDO75618 318 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 LY6G6CO95867 125 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 LINC00869P0C866 280 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 ZNF705DP0CH99 300 aaPredicted RBP2.96□□□□□ -1.94
VTI1B-203ENST00000554636 ZNF705BP0CI00 300 aaPredicted RBP2.96□□□□□ -1.94
VTI1B-203ENST00000554636 MIFP14174 115 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 ORM2P19652 201 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 HLA-DMBP28068 263 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 ID1P41134 155 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 GALR1P47211 349 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 FXYD7P58549 80 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 TAS2R30P59541 319 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 RRAS2P62070 204 aaPredicted RBP2.96□□□□□ -1.94
VTI1B-203ENST00000554636 SLC38A11Q08AI6 406 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 IL15RAQ13261 267 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 ASAH1Q13510 395 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 FCN2Q15485 313 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 SAMD13Q5VXD3 122 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 AMTNQ6UX39 209 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 ZNF705AQ6ZN79 300 aaPredicted RBP2.96□□□□□ -1.94
VTI1B-203ENST00000554636 LINC00299Q6ZSB3 139 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 OR8I2Q8N0Y5 310 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 BPIFCQ8NFQ6 507 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 PPP1R14BQ96C90 147 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 MGST2Q99735 147 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 SHANK2-AS3Q9BTD1 123 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 SLC25A39Q9BZJ4 359 aaPredicted RBP2.96□□□□□ -1.94
VTI1B-203ENST00000554636 MFFQ9GZY8 342 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 SLC25A22Q9H936 323 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 NUDT15Q9NV35 164 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 GSKIPQ9P0R6 139 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 DOK5Q9P104 306 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 XCL2Q9UBD3 114 aa2.96□□□□□ -1.94
VTI1B-203ENST00000554636 LSM5Q9Y4Y9 91 aaKnown RBP2.96□□□□□ -1.94
VTI1B-203ENST00000554636 A0A087X0K7 114 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 FAM24AA6NFZ4 105 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 FAM25EA8MYX2 175 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 PAGE4O60829 102 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 HYPMO75409 117 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 UPK1BO75841 260 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 IL5P05113 134 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 MEOX2P50222 304 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 NUTF2P61970 127 aaKnown RBP2.95□□□□□ -1.94
VTI1B-203ENST00000554636 SELENOTP62341 195 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 PSG9Q00887 426 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 IFITM3Q01628 133 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 VWC2Q2TAL6 325 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 C12orf74Q32Q52 190 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 SPATA31B1PQ5VZV4 182 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 LGALS9CQ6DKI2 356 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 PATE2Q6UY27 113 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms