RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 UBE2D3P61077 147 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 UBE2D2P62837 147 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 UBE2L3P68036 154 aaKnown RBP2.6□□□□□ -1.99
SEC23A-207ENST00000554615 NSUN5P1Q3KNT7 163 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 MRPL51Q4U2R6 128 aaKnown RBP2.6□□□□□ -1.99
SEC23A-207ENST00000554615 XP32Q5T750 250 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 C9orf135Q5VTT2 229 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 OR4X2Q8NGF9 303 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 SSMEM1Q8WWF3 244 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 INTS1Q8N201 2190 aaKnown RBP2.6□□□□□ -1.99
SEC23A-207ENST00000554615 A0A1B0GUT8 65 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 NDUFA4O00483 81 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 ZNHIT1O43257 154 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 SH2D1AO60880 128 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 NCR2O95944 276 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 CRYGDP07320 174 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 S100A7P31151 101 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 POLR2KP53803 58 aaKnown RBP2.6□□□□□ -1.99
SEC23A-207ENST00000554615 CDSNQ15517 529 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 S100A7AQ86SG5 101 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 TMEM158Q8WZ71 300 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 LINC00479Q96M42 142 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 SPATA25Q9BR10 227 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 ESM1Q9NQ30 184 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 DPM3Q9P2X0 92 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 GNG12Q9UBI6 72 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 URGCP-MRPS24S4R325 110 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 USF3Q68DE3 2245 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 ABCA2Q9BZC7 2435 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 IGLV4-69A0A075B6H9 119 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 LOC107984156A0A0G2JMH3 177 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 C9orf118A6NHY6 69 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 IGIPA6NJ69 53 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 COX7A2P2O60397 106 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 IGHV1-69P01742 117 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 UBE2G2P60604 165 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 CCDC144NLQ6NUI1 221 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 ARL17AQ8IVW1 177 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 C18orf15Q96N68 181 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 FAM110AQ9BQ89 295 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 VAMP8Q9BV40 100 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 COL25A1Q9BXS0 654 aaPredicted RBP2.6□□□□□ -1.99
SEC23A-207ENST00000554615 HSPB8Q9UJY1 196 aa2.6□□□□□ -1.99
SEC23A-207ENST00000554615 PKHD1P08F94 4074 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 DNAH8Q96JB1 4490 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 MUC3AQ02505 3323 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 GRIFINA4D1Z8 144 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 TSHBP01222 138 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 ZFP36P26651 326 aaKnown RBP2.59□□□□□ -1.99
SEC23A-207ENST00000554615 GPR183P32249 361 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 FABP6P51161 128 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 MORN3Q6PF18 240 aaPredicted RBP2.59□□□□□ -1.99
SEC23A-207ENST00000554615 BPIFA4PQ86YQ2 179 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 KLK15Q9H2R5 256 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 PYGO1Q9Y3Y4 419 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 PRRC2AP48634 2157 aaKnown RBP2.59□□□□□ -1.99
SEC23A-207ENST00000554615 TRRAPQ9Y4A5 3859 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 MYO9BQ13459 2157 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 TMEM8BA6NDV4 472 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 OR2T8A6NH00 312 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 G3V4G9 280 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 SUMO1P63165 101 aaKnown RBP2.59□□□□□ -1.99
SEC23A-207ENST00000554615 RIGQ13278 110 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 BEAN1Q3B7T3 259 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 LCE3BQ5TA77 95 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 AMTNQ6UX39 209 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 LINC00173Q6ZV60 143 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 DEFB124Q8NES8 71 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 DCANP1Q8TF63 244 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 ARPC1AQ92747 370 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 LITAFQ99732 161 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 ASCL2Q99929 193 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 PRM3Q9NNZ6 103 aa2.59□□□□□ -1.99
SEC23A-207ENST00000554615 NXT2Q9NPJ8 142 aaKnown RBP2.59□□□□□ -1.99
SEC23A-207ENST00000554615 TRBV27A0A0K0K1C4 114 aa2.59□□□□□ -2
SEC23A-207ENST00000554615 K7EP34 96 aa2.59□□□□□ -2
SEC23A-207ENST00000554615 SMAD7O15105 426 aaKnown RBP2.59□□□□□ -2
SEC23A-207ENST00000554615 ARMS2P0C7Q2 107 aa2.59□□□□□ -2
SEC23A-207ENST00000554615 PSMB8P28062 276 aa2.59□□□□□ -2
SEC23A-207ENST00000554615 HSD52Q0P140 79 aa2.59□□□□□ -2
SEC23A-207ENST00000554615 VMO1Q7Z5L0 202 aa2.59□□□□□ -2
SEC23A-207ENST00000554615 LRRC75A-AS1Q8N1F1 130 aa2.59□□□□□ -2
SEC23A-207ENST00000554615 NEK7Q8TDX7 302 aa2.59□□□□□ -2
SEC23A-207ENST00000554615 LEAP2Q969E1 77 aa2.59□□□□□ -2
SEC23A-207ENST00000554615 KIAA0100Q14667 2235 aaKnown RBP2.59□□□□□ -2
SEC23A-207ENST00000554615 LOC100131303A0A0U1RQF7 123 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 CHEK1O14757 476 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 SPRY3O43610 288 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 EIF4EBP3O60516 100 aaPredicted RBP2.58□□□□□ -2
SEC23A-207ENST00000554615 MFAP4P55083 255 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 C4orf17Q53FE4 359 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 PRSS57Q6UWY2 283 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 NECAP1Q8NC96 275 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 RFESDQ8TAC1 157 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 USMG5Q96IX5 58 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 TIMM17AQ99595 171 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 ENY2Q9NPA8 101 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 ZNF407Q9C0G0 2248 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 A0A087WX48 190 aa2.58□□□□□ -2
SEC23A-207ENST00000554615 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms