RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 L7N2F9 121 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 NXPH4O95158 308 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 TMEM50AO95807 157 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 MT-CO2P00403 227 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 TBPP20226 339 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 CRYBB3P26998 211 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 S100A11P31949 105 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 PRSS3P35030 304 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 P2RY1P47900 373 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 TAS2R19P59542 299 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 ERVK-16P61578 105 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 DAD1P61803 113 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 SNRPD3P62318 126 aaKnown RBP3.36□□□□□ -1.87
ATXN3-228ENST00000554592 DHRS2Q13268 280 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 CDNFQ49AH0 187 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 PSMG4Q5JS54 123 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 ETFRF1Q6IPR1 90 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 OR2T35Q8NGX2 323 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 LHFPL5Q8TAF8 219 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 LRRC20Q8TCA0 184 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 RBPMSQ93062 196 aaKnown RBP3.36□□□□□ -1.87
ATXN3-228ENST00000554592 PHYHIPLQ96FC7 376 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 NARS2Q96I59 477 aaKnown RBP3.36□□□□□ -1.87
ATXN3-228ENST00000554592 METTL26Q96S19 204 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 ATG5Q9H1Y0 275 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 IFT46Q9NQC8 304 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 COMMD9Q9P000 198 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 KLK11Q9UBX7 282 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 MTFP1Q9UDX5 166 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 ANXA10Q9UJ72 324 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 PRNDQ9UKY0 176 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 LINC00588Q9Y4M8 146 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 IGLV7-46A0A075B6I9 117 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 IGHV3OR16-12A0A075B7B8 117 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 A0A1B0GU03 582 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 LOC105371267A0A1B0GV96 52 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 KRASP01116 189 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 IGHV3-48P01763 117 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 HBE1P02100 147 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 AKAIN1P0CW23 69 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 CXCL3P19876 107 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 FCGR2CP31995 323 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 CBX5P45973 191 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 CNN1P51911 297 aaKnown RBP3.35□□□□□ -1.87
ATXN3-228ENST00000554592 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 UBE2MP61081 183 aaKnown RBP3.35□□□□□ -1.87
ATXN3-228ENST00000554592 TSPAN5P62079 268 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 ERHP84090 104 aaKnown RBP3.35□□□□□ -1.87
ATXN3-228ENST00000554592 ZNF345Q14585 488 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 MEF2DQ14814 521 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 USF2Q15853 346 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-228ENST00000554592 TTC32Q5I0X7 151 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 UQCC3Q6UW78 93 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 COMMD7Q86VX2 200 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 TMEM229BQ8NBD8 167 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 GPX8Q8TED1 209 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 PINX1Q96BK5 328 aaKnown RBP3.35□□□□□ -1.87
ATXN3-228ENST00000554592 MRPL53Q96EL3 112 aaKnown RBP3.35□□□□□ -1.87
ATXN3-228ENST00000554592 GOLT1BQ9Y3E0 138 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 YTHDF2Q9Y5A9 579 aaKnown RBP3.35□□□□□ -1.87
ATXN3-228ENST00000554592 MYCBP2O75592 4640 aa3.35□□□□□ -1.87
ATXN3-228ENST00000554592 TMEM235A6NFC5 223 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 DISC1C4P0D8 188 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 TEX46H3BTG2 121 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 TSC22D2O75157 780 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 MPC2O95563 127 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 RAB3DO95716 219 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 PPYP01298 95 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 IFNA5P01569 189 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 SMR3BP02814 79 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-228ENST00000554592 SLC25A4P12235 298 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 HLA-DRB4P13762 266 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 F2RP25116 425 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 LPAR6P43657 344 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 FHITP49789 147 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 CCR6P51684 374 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 HSPE1P61604 102 aaKnown RBP3.34□□□□□ -1.87
ATXN3-228ENST00000554592 HERV-K104P63124 156 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 OR2F1Q13607 317 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 CLINT1Q14677 625 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 RRN3P1Q2M238 152 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 RNASE10Q5GAN6 216 aaKnown RBP3.34□□□□□ -1.87
ATXN3-228ENST00000554592 AADACL3Q5VUY0 350 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 STEAP1BQ6NZ63 245 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 SSX7Q7RTT5 188 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 OR4C16Q8NGL9 310 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 OR10G7Q8NGN6 311 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 OR51H1Q8NH63 302 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 TMEM230Q96A57 120 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 SCGB3A2Q96PL1 93 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 OPRPNQ99935 248 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-228ENST00000554592 PRRT1Q99946 306 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 STRAPQ9Y3F4 350 aaKnown RBP3.34□□□□□ -1.87
ATXN3-228ENST00000554592 HLA-DRB4X5D2U9 266 aa3.34□□□□□ -1.87
ATXN3-228ENST00000554592 A0A0B4J2A0 478 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 IGHV3-38A0A0C4DH36 116 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 RAB19A4D1S5 217 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 LYRM9A8MSI8 78 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 F5H768 121 aa3.33□□□□□ -1.88
ATXN3-228ENST00000554592 G3V3Q6 166 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms