RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 C18orf15Q96N68 181 aa13.41□□□□□ -0.26
PPP4R3A-202ENST00000554390 ATP6V0BQ99437 205 aa13.41□□□□□ -0.26
PPP4R3A-202ENST00000554390 PRSS47A8MTI9 375 aa13.4□□□□□ -0.26
PPP4R3A-202ENST00000554390 K7ERJ3 54 aa13.4□□□□□ -0.26
PPP4R3A-202ENST00000554390 COX7A1P24310 79 aa13.4□□□□□ -0.26
PPP4R3A-202ENST00000554390 BCL6BQ8N143 479 aaPredicted RBP13.4□□□□□ -0.26
PPP4R3A-202ENST00000554390 GATD1Q8NB37 220 aa13.4□□□□□ -0.26
PPP4R3A-202ENST00000554390 VGLL1Q99990 258 aa13.4□□□□□ -0.26
PPP4R3A-202ENST00000554390 ADIPOQQ15848 244 aa13.4□□□□□ -0.26
PPP4R3A-202ENST00000554390 PRSS33Q8NF86 280 aa13.4□□□□□ -0.26
PPP4R3A-202ENST00000554390 IGHV3OR16-8A0A075B7F1 116 aa13.39□□□□□ -0.27
PPP4R3A-202ENST00000554390 KLF17Q5JT82 389 aaPredicted RBP13.39□□□□□ -0.27
PPP4R3A-202ENST00000554390 IGF2RP11717 2491 aa13.39□□□□□ -0.27
PPP4R3A-202ENST00000554390 RBP4P02753 201 aa13.39□□□□□ -0.27
PPP4R3A-202ENST00000554390 GATA4P43694 442 aa13.39□□□□□ -0.27
PPP4R3A-202ENST00000554390 IGFL2Q6UWQ7 119 aa13.39□□□□□ -0.27
PPP4R3A-202ENST00000554390 WFDC3Q8IUB2 231 aa13.39□□□□□ -0.27
PPP4R3A-202ENST00000554390 IFI27L1Q96BM0 104 aa13.39□□□□□ -0.27
PPP4R3A-202ENST00000554390 DKK2Q9UBU2 259 aa13.39□□□□□ -0.27
PPP4R3A-202ENST00000554390 PRELID3AQ96N28 172 aa13.38□□□□□ -0.27
PPP4R3A-202ENST00000554390 FBXL15Q9H469 300 aa13.38□□□□□ -0.27
PPP4R3A-202ENST00000554390 OTORQ9NRC9 128 aa13.38□□□□□ -0.27
PPP4R3A-202ENST00000554390 HBDP02042 147 aa13.38□□□□□ -0.27
PPP4R3A-202ENST00000554390 MRGPRG-AS1Q2M3A8 158 aa13.38□□□□□ -0.27
PPP4R3A-202ENST00000554390 TMEM167AQ8TBQ9 72 aa13.38□□□□□ -0.27
PPP4R3A-202ENST00000554390 TTTY13Q9BZ97 58 aa13.38□□□□□ -0.27
PPP4R3A-202ENST00000554390 LY6HO94772 140 aa13.38□□□□□ -0.27
PPP4R3A-202ENST00000554390 WFDC2Q14508 124 aa13.38□□□□□ -0.27
PPP4R3A-202ENST00000554390 C17orf100A8MU93 164 aa13.37□□□□□ -0.27
PPP4R3A-202ENST00000554390 M0R3E3 92 aa13.37□□□□□ -0.27
PPP4R3A-202ENST00000554390 AMN1Q8IY45 258 aa13.37□□□□□ -0.27
PPP4R3A-202ENST00000554390 FAM169BQ8N8A8 192 aa13.37□□□□□ -0.27
PPP4R3A-202ENST00000554390 A0A1B0GW15 77 aa13.37□□□□□ -0.27
PPP4R3A-202ENST00000554390 C8orf46Q8TAG6 207 aa13.37□□□□□ -0.27
PPP4R3A-202ENST00000554390 TRGV9Q99603 122 aa13.37□□□□□ -0.27
PPP4R3A-202ENST00000554390 VPS13CQ709C8 3753 aa13.37□□□□□ -0.27
PPP4R3A-202ENST00000554390 HRNRQ86YZ3 2850 aaPredicted RBP13.37□□□□□ -0.27
PPP4R3A-202ENST00000554390 CCDC144NLQ6NUI1 221 aa13.36□□□□□ -0.27
PPP4R3A-202ENST00000554390 SPANXB1Q9NS25 103 aaPredicted RBP13.36□□□□□ -0.27
PPP4R3A-202ENST00000554390 TMEM213A2RRL7 107 aa13.36□□□□□ -0.27
PPP4R3A-202ENST00000554390 IGKV2D-26A0A0A0MRZ7 120 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 TMEM238LA0A1B0GVL6 79 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 NDUFB3O43676 98 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 NDUFS7O75251 213 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 RAB9AP51151 201 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 ZNF493Q6ZR52 646 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 MUC6Q6W4X9 2439 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 IGHV3-35A0A0C4DH35 117 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 TM4SF5O14894 197 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 LOXP28300 417 aaPredicted RBP13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 CRIP1P50238 77 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 ORMDL3Q8N138 153 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 PHLDA1Q8WV24 401 aaPredicted RBP13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 WFDC12Q8WWY7 111 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 K7EMI3 77 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 CRYGCP07315 174 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 HOXB4P17483 251 aaPredicted RBP13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 TNFRSF1AP19438 455 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 IGFL4Q6B9Z1 124 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 LINC00574Q9H8X3 128 aa13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 NHP2Q9NX24 153 aaKnown RBP13.35□□□□□ -0.27
PPP4R3A-202ENST00000554390 J3QR89 54 aa13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 PAX8Q06710 450 aa13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 FAM104BQ5XKR9 115 aa13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 FOXI2Q6ZQN5 318 aa13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 SH2D6Q7Z4S9 175 aa13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 CHAC1Q9BUX1 264 aa13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 HIGD1AQ9Y241 93 aa13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 U3KQK5 164 aa13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 CUBNO60494 3623 aa13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 A0A0G2JNJ9 132 aa13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 IGHV3-23P01764 117 aa13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 RPL27AP46776 148 aaKnown RBP13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 PLGLAQ15195 96 aa13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 TEX36Q5VZQ5 186 aa13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 Q9UFV3 132 aa13.34□□□□□ -0.27
PPP4R3A-202ENST00000554390 TMEM178BH3BS89 294 aa13.33□□□□□ -0.28
PPP4R3A-202ENST00000554390 CKS1BP61024 79 aa13.33□□□□□ -0.28
PPP4R3A-202ENST00000554390 VMA21Q3ZAQ7 101 aa13.33□□□□□ -0.28
PPP4R3A-202ENST00000554390 SPAG8Q99932 426 aaPredicted RBP13.33□□□□□ -0.28
PPP4R3A-202ENST00000554390 SPATA25Q9BR10 227 aa13.33□□□□□ -0.28
PPP4R3A-202ENST00000554390 ETDBQ3ZM63 59 aa13.33□□□□□ -0.28
PPP4R3A-202ENST00000554390 LYZL1Q6UWQ5 148 aa13.33□□□□□ -0.28
PPP4R3A-202ENST00000554390 F8W1H4 67 aa13.32□□□□□ -0.28
PPP4R3A-202ENST00000554390 SMKR1H3BMG3 65 aa13.32□□□□□ -0.28
PPP4R3A-202ENST00000554390 CT45A10P0DMU9 189 aa13.32□□□□□ -0.28
PPP4R3A-202ENST00000554390 MRPL51Q4U2R6 128 aaKnown RBP13.32□□□□□ -0.28
PPP4R3A-202ENST00000554390 DYNLRB1Q9NP97 96 aa13.32□□□□□ -0.28
PPP4R3A-202ENST00000554390 PSG8Q9UQ74 426 aa13.32□□□□□ -0.28
PPP4R3A-202ENST00000554390 WI2-2373I1.2A0A1W2PRP0 233 aa13.32□□□□□ -0.28
PPP4R3A-202ENST00000554390 THBDP07204 575 aa13.32□□□□□ -0.28
PPP4R3A-202ENST00000554390 PRR30Q53SZ7 412 aaPredicted RBP13.32□□□□□ -0.28
PPP4R3A-202ENST00000554390 Q6AWC8 147 aa13.32□□□□□ -0.28
PPP4R3A-202ENST00000554390 ARPC1AQ92747 370 aa13.32□□□□□ -0.28
PPP4R3A-202ENST00000554390 HIGD1BQ9P298 99 aa13.32□□□□□ -0.28
PPP4R3A-202ENST00000554390 SLC25A39Q9BZJ4 359 aaPredicted RBP13.32□□□□□ -0.28
PPP4R3A-202ENST00000554390 NPYP01303 97 aa13.31□□□□□ -0.28
PPP4R3A-202ENST00000554390 IGHV1-8P0DP01 117 aa13.31□□□□□ -0.28
PPP4R3A-202ENST00000554390 TRBV6-1A0A0K0K1D8 114 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms