RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 RNF141Q8WVD5 230 aa13.13□□□□□ -0.31
CPSF2-203ENST00000554290 SAT2Q96F10 170 aaPredicted RBP13.13□□□□□ -0.31
CPSF2-203ENST00000554290 C2orf50Q96LR7 162 aa13.13□□□□□ -0.31
CPSF2-203ENST00000554290 PARD6GQ9BYG4 376 aaPredicted RBP13.13□□□□□ -0.31
CPSF2-203ENST00000554290 TRAV6A0A075B6T7 132 aa13.12□□□□□ -0.31
CPSF2-203ENST00000554290 LEPP41159 167 aa13.12□□□□□ -0.31
CPSF2-203ENST00000554290 KIR3DS1Q14943 382 aa13.12□□□□□ -0.31
CPSF2-203ENST00000554290 MIC13Q5XKP0 118 aa13.12□□□□□ -0.31
CPSF2-203ENST00000554290 C12orf45Q8N5I9 185 aaPredicted RBP13.12□□□□□ -0.31
CPSF2-203ENST00000554290 NUDT15Q9NV35 164 aa13.12□□□□□ -0.31
CPSF2-203ENST00000554290 WDR83OSQ9Y284 106 aa13.12□□□□□ -0.31
CPSF2-203ENST00000554290 DNAH17Q9UFH2 4485 aa13.11□□□□□ -0.31
CPSF2-203ENST00000554290 FAM24AA6NFZ4 105 aa13.11□□□□□ -0.31
CPSF2-203ENST00000554290 SNURFLB1AK76 121 aa13.11□□□□□ -0.31
CPSF2-203ENST00000554290 S100A11P31949 105 aa13.11□□□□□ -0.31
CPSF2-203ENST00000554290 OR5I1Q13606 314 aa13.11□□□□□ -0.31
CPSF2-203ENST00000554290 C6orf223Q8N319 242 aa13.11□□□□□ -0.31
CPSF2-203ENST00000554290 GNPNAT1Q96EK6 184 aaPredicted RBP13.11□□□□□ -0.31
CPSF2-203ENST00000554290 ODF3Q96PU9 254 aa13.11□□□□□ -0.31
CPSF2-203ENST00000554290 SEC22CQ9BRL7 303 aa13.11□□□□□ -0.31
CPSF2-203ENST00000554290 LINC00588Q9Y4M8 146 aa13.11□□□□□ -0.31
CPSF2-203ENST00000554290 FAT2Q9NYQ8 4349 aa13.11□□□□□ -0.31
CPSF2-203ENST00000554290 TRAV5A0A0B4J249 113 aa13.1□□□□□ -0.31
CPSF2-203ENST00000554290 NPIPB6E9PJ23 425 aa13.1□□□□□ -0.31
CPSF2-203ENST00000554290 ZNF253O75346 499 aa13.1□□□□□ -0.31
CPSF2-203ENST00000554290 RLN2P04090 185 aa13.1□□□□□ -0.31
CPSF2-203ENST00000554290 CT45A10P0DMU9 189 aa13.1□□□□□ -0.31
CPSF2-203ENST00000554290 RPL29P47914 159 aaKnown RBP13.1□□□□□ -0.31
CPSF2-203ENST00000554290 SULT1A1P50225 295 aa13.1□□□□□ -0.31
CPSF2-203ENST00000554290 HBG1P69891 147 aa13.1□□□□□ -0.31
CPSF2-203ENST00000554290 HBG2P69892 147 aa13.1□□□□□ -0.31
CPSF2-203ENST00000554290 VWC2Q2TAL6 325 aa13.1□□□□□ -0.31
CPSF2-203ENST00000554290 ZNF575Q86XF7 245 aa13.1□□□□□ -0.31
CPSF2-203ENST00000554290 C11orf1Q9H5F2 150 aa13.1□□□□□ -0.31
CPSF2-203ENST00000554290 SLC39A9Q9NUM3 307 aa13.1□□□□□ -0.31
CPSF2-203ENST00000554290 PCLOQ9Y6V0 5065 aa13.09□□□□□ -0.31
CPSF2-203ENST00000554290 TRAV12-3A0A0B4J271 114 aa13.09□□□□□ -0.31
CPSF2-203ENST00000554290 J3KRW8 73 aa13.09□□□□□ -0.31
CPSF2-203ENST00000554290 M6PRP20645 277 aa13.09□□□□□ -0.31
CPSF2-203ENST00000554290 S100A10P60903 97 aa13.09□□□□□ -0.31
CPSF2-203ENST00000554290 BAXQ07812 192 aa13.09□□□□□ -0.31
CPSF2-203ENST00000554290 SSX7Q7RTT5 188 aa13.09□□□□□ -0.31
CPSF2-203ENST00000554290 STX12Q86Y82 276 aa13.09□□□□□ -0.31
CPSF2-203ENST00000554290 LINC00612Q8N6U2 182 aa13.09□□□□□ -0.31
CPSF2-203ENST00000554290 RXFP4Q8TDU9 374 aa13.09□□□□□ -0.31
CPSF2-203ENST00000554290 ZNF503Q96F45 646 aa13.09□□□□□ -0.31
CPSF2-203ENST00000554290 PYGO2Q9BRQ0 406 aa13.09□□□□□ -0.31
CPSF2-203ENST00000554290 LYRM2Q9NU23 88 aaPredicted RBP13.09□□□□□ -0.31
CPSF2-203ENST00000554290 ZNF586Q9NXT0 402 aa13.09□□□□□ -0.31
CPSF2-203ENST00000554290 NDUFA13Q9P0J0 144 aa13.09□□□□□ -0.31
CPSF2-203ENST00000554290 DNAH2Q9P225 4427 aa13.09□□□□□ -0.31
CPSF2-203ENST00000554290 TRAV26-1A0A087WT03 109 aa13.08□□□□□ -0.32
CPSF2-203ENST00000554290 UBE2L5PA0A1B0GUS4 154 aa13.08□□□□□ -0.32
CPSF2-203ENST00000554290 GAGE12BA1L429 117 aa13.08□□□□□ -0.32
CPSF2-203ENST00000554290 GAGE7O76087 117 aa13.08□□□□□ -0.32
CPSF2-203ENST00000554290 GAGE12FP0CL80 117 aa13.08□□□□□ -0.32
CPSF2-203ENST00000554290 GAGE12GP0CL81 117 aa13.08□□□□□ -0.32
CPSF2-203ENST00000554290 GAGE12IP0CL82 117 aa13.08□□□□□ -0.32
CPSF2-203ENST00000554290 TNP2Q05952 138 aa13.08□□□□□ -0.32
CPSF2-203ENST00000554290 ATP6V1FQ16864 119 aa13.08□□□□□ -0.32
CPSF2-203ENST00000554290 CHAC2Q8WUX2 184 aa13.08□□□□□ -0.32
CPSF2-203ENST00000554290 MRPL53Q96EL3 112 aaKnown RBP13.08□□□□□ -0.32
CPSF2-203ENST00000554290 TRBV19A0A075B6N1 114 aa13.07□□□□□ -0.32
CPSF2-203ENST00000554290 H2AFB2P0C5Z0 115 aa13.07□□□□□ -0.32
CPSF2-203ENST00000554290 TMEM252Q8N6L7 170 aa13.07□□□□□ -0.32
CPSF2-203ENST00000554290 Q9H8V8 135 aa13.07□□□□□ -0.32
CPSF2-203ENST00000554290 IGSF23A1L1A6 192 aa13.06□□□□□ -0.32
CPSF2-203ENST00000554290 H3BNG1 76 aa13.06□□□□□ -0.32
CPSF2-203ENST00000554290 SLC25A5P05141 298 aaKnown RBP13.06□□□□□ -0.32
CPSF2-203ENST00000554290 FGF7P21781 194 aa13.06□□□□□ -0.32
CPSF2-203ENST00000554290 DAZ2Q13117 558 aaKnown RBP13.06□□□□□ -0.32
CPSF2-203ENST00000554290 RAB32Q13637 225 aa13.06□□□□□ -0.32
CPSF2-203ENST00000554290 CCDC32Q9BV29 185 aa13.06□□□□□ -0.32
CPSF2-203ENST00000554290 TMEM14CQ9P0S9 112 aa13.06□□□□□ -0.32
CPSF2-203ENST00000554290 PRELID1Q9Y255 219 aa13.06□□□□□ -0.32
CPSF2-203ENST00000554290 TIMM9Q9Y5J7 89 aa13.06□□□□□ -0.32
CPSF2-203ENST00000554290 PKHD1P08F94 4074 aa13.05□□□□□ -0.32
CPSF2-203ENST00000554290 A0A0J9YY99 117 aa13.05□□□□□ -0.32
CPSF2-203ENST00000554290 MPDU1O75352 247 aa13.05□□□□□ -0.32
CPSF2-203ENST00000554290 HIST1H1EP10412 219 aaKnown RBP13.05□□□□□ -0.32
CPSF2-203ENST00000554290 HOXA5P20719 270 aa13.05□□□□□ -0.32
CPSF2-203ENST00000554290 IL15RAQ13261 267 aa13.05□□□□□ -0.32
CPSF2-203ENST00000554290 TTC32Q5I0X7 151 aa13.05□□□□□ -0.32
CPSF2-203ENST00000554290 GPN1Q9HCN4 374 aaPredicted RBP13.05□□□□□ -0.32
CPSF2-203ENST00000554290 PKD1P98161 4303 aa13.04□□□□□ -0.32
CPSF2-203ENST00000554290 FAM240BA0A1B0GVZ2 78 aa13.04□□□□□ -0.32
CPSF2-203ENST00000554290 C16orf90A8MZG2 172 aa13.04□□□□□ -0.32
CPSF2-203ENST00000554290 PDE6HQ13956 83 aa13.04□□□□□ -0.32
CPSF2-203ENST00000554290 LINC00477Q96M19 166 aa13.04□□□□□ -0.32
CPSF2-203ENST00000554290 C7orf71A4D174 169 aa13.03□□□□□ -0.32
CPSF2-203ENST00000554290 M0R3E3 92 aa13.03□□□□□ -0.32
CPSF2-203ENST00000554290 ERCC8Q13216 396 aa13.03□□□□□ -0.32
CPSF2-203ENST00000554290 MZT2BQ6NZ67 158 aa13.03□□□□□ -0.32
CPSF2-203ENST00000554290 ZNF680Q8NEM1 530 aa13.03□□□□□ -0.32
CPSF2-203ENST00000554290 AAMDCQ9H7C9 122 aa13.03□□□□□ -0.32
CPSF2-203ENST00000554290 TRGV2A0A075B6R0 118 aa13.02□□□□□ -0.33
CPSF2-203ENST00000554290 NDUFB4O95168 129 aa13.02□□□□□ -0.33
CPSF2-203ENST00000554290 Q6ZTI0 123 aa13.02□□□□□ -0.33
CPSF2-203ENST00000554290 BLNKQ8WV28 456 aa13.02□□□□□ -0.33
CPSF2-203ENST00000554290 LINC00467Q9BRT7 94 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms