RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 PRR15Q8IV56 129 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 ZIC4Q8N9L1 334 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 SLC25A40Q8TBP6 338 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 MAL2Q969L2 176 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 BORCS8Q96FH0 119 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 LINC00526Q96FQ7 95 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 SPACA5Q96QH8 159 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 GPX7Q96SL4 187 aaPredicted RBP1.31□□□□□ -2.2
VRK1-202ENST00000553683 IMMP2LQ96T52 175 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 PKMYT1Q99640 499 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 SLC25A21Q9BQT8 299 aaPredicted RBP1.31□□□□□ -2.2
VRK1-202ENST00000553683 GINS4Q9BRT9 223 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 RTL8AQ9BWD3 113 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 SPANXDQ9BXN6 97 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 TCEAL2Q9H3H9 227 aaPredicted RBP1.31□□□□□ -2.2
VRK1-202ENST00000553683 RERGLQ9H628 205 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 TMEM100Q9NV29 134 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 CACFD1Q9UGQ2 172 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 LAMTOR3Q9UHA4 124 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 RPUSD1Q9UJJ7 312 aaKnown RBP1.31□□□□□ -2.2
VRK1-202ENST00000553683 WASHC3Q9Y3C0 194 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 PXMP4Q9Y6I8 212 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 KIAA1551Q9HCM1 1747 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 PAPPA2Q9BXP8 1791 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 RYR1P21817 5038 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 KIAA1671Q9BY89 1806 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 DCCP43146 1447 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 NBEAL1Q6ZS30 2694 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 FREM2Q5SZK8 3169 aa1.31□□□□□ -2.2
VRK1-202ENST00000553683 LOC400499M0QZD8 3231 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 DSPP15924 2871 aaKnown RBP1.3□□□□□ -2.2
VRK1-202ENST00000553683 CFAP74Q9C0B2 1584 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 ABCA9Q8IUA7 1624 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 CLTCQ00610 1675 aaKnown RBP1.3□□□□□ -2.2
VRK1-202ENST00000553683 TOPAZ1Q8N9V7 1692 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 PKD1L3Q7Z443 1732 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 TRBV7-6A0A0J9YX20 115 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 C7orf77A4D0Y5 90 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 MEIS3P1A6NDR6 274 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 ARRDC5A6NEK1 342 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 OR2T8A6NH00 312 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 HMSDA8MTL9 139 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 BBIP1A8MTZ0 92 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 OOSP1A8MZH6 123 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 C4orf51C9J302 202 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 ISLRO14498 428 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 GEMIN2O14893 280 aaKnown RBP1.3□□□□□ -2.2
VRK1-202ENST00000553683 SLC37A4O43826 429 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 UBL3O95164 117 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 SIX6O95475 246 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 SFT2D2O95562 160 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 NAPSAO96009 420 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 MMP7P09237 267 aaPredicted RBP1.3□□□□□ -2.2
VRK1-202ENST00000553683 SEC11BP0C7V7 166 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 LINC00032P0C843 101 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 CECR9P0C854 216 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 TRGC1P0CF51 173 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 INAFM2P0DMQ5 153 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 CRYGAP11844 174 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 SLC25A6P12236 298 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 CD70P32970 193 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 RPL22P35268 128 aaKnown RBP1.3□□□□□ -2.2
VRK1-202ENST00000553683 OPRM1P35372 400 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 GUCA1AP43080 201 aaPredicted RBP1.3□□□□□ -2.2
VRK1-202ENST00000553683 SLC18A1P54219 525 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 PPP1CAP62136 330 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 QRFPP83859 136 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 ZNF90Q03938 601 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 ELOCQ15369 112 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 CST6Q15828 149 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 RTL8BQ17RB0 113 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 SPRNQ5BIV9 151 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 MRPL2Q5T653 305 aaKnown RBP1.3□□□□□ -2.2
VRK1-202ENST00000553683 AADACL3Q5VUY0 350 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 OR2T2Q6IF00 324 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 MRPL54Q6P161 138 aaKnown RBP1.3□□□□□ -2.2
VRK1-202ENST00000553683 SCGB1D4Q6XE38 83 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 Q6ZS92 163 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 CLEC20AQ6ZU45 233 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 ADM2Q7Z4H4 148 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 ANKRD29Q8N6D5 301 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 OR4B1Q8NGF8 309 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 OR4X2Q8NGF9 303 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 OR4K13Q8NH42 304 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 OTOSQ8NHW6 89 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 RPS4Y2Q8TD47 263 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 TWIST2Q8WVJ9 160 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 MUCL1Q96DR8 90 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 NMNAT3Q96T66 252 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 AGPAT4-IT1Q9H0P7 198 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 DUSP21Q9H596 190 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 BCL2L10Q9HD36 194 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 CCDC167Q9P0B6 97 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 OR5V1Q9UGF6 321 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 ANAPC10Q9UM13 185 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 COQ4Q9Y3A0 265 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 TPRKBQ9Y3C4 175 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 MYO16Q9Y6X6 1858 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 CREBBPQ92793 2442 aa1.3□□□□□ -2.2
VRK1-202ENST00000553683 FRYLO94915 3013 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms