RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 PRAC2D3DTV9 90 aa13.33□□□□□ -0.28
CPSF2-202ENST00000553427 OR7C2O60412 319 aa13.33□□□□□ -0.28
CPSF2-202ENST00000553427 ATP6V0CP27449 155 aa13.33□□□□□ -0.28
CPSF2-202ENST00000553427 SERF2P84101 59 aa13.33□□□□□ -0.28
CPSF2-202ENST00000553427 HSD17B11Q8NBQ5 300 aa13.33□□□□□ -0.28
CPSF2-202ENST00000553427 ZNF503Q96F45 646 aa13.33□□□□□ -0.28
CPSF2-202ENST00000553427 ODF3Q96PU9 254 aa13.33□□□□□ -0.28
CPSF2-202ENST00000553427 RFNGQ9Y644 331 aa13.33□□□□□ -0.28
CPSF2-202ENST00000553427 BORCS7-ASMTA0A0B4J1R7 106 aa13.32□□□□□ -0.28
CPSF2-202ENST00000553427 TAAR5O14804 337 aa13.32□□□□□ -0.28
CPSF2-202ENST00000553427 CRXO43186 299 aaPredicted RBP13.32□□□□□ -0.28
CPSF2-202ENST00000553427 INSP01308 110 aa13.32□□□□□ -0.28
CPSF2-202ENST00000553427 RAB2AP61019 212 aa13.32□□□□□ -0.28
CPSF2-202ENST00000553427 SPINK13Q1W4C9 94 aa13.32□□□□□ -0.28
CPSF2-202ENST00000553427 C1orf158Q8N1D5 194 aa13.32□□□□□ -0.28
CPSF2-202ENST00000553427 BLNKQ8WV28 456 aa13.32□□□□□ -0.28
CPSF2-202ENST00000553427 GNPNAT1Q96EK6 184 aaPredicted RBP13.32□□□□□ -0.28
CPSF2-202ENST00000553427 AAMDCQ9H7C9 122 aa13.32□□□□□ -0.28
CPSF2-202ENST00000553427 SACSQ9NZJ4 4579 aa13.31□□□□□ -0.28
CPSF2-202ENST00000553427 NPIPB6E9PJ23 425 aa13.31□□□□□ -0.28
CPSF2-202ENST00000553427 M0R2Z0 102 aa13.31□□□□□ -0.28
CPSF2-202ENST00000553427 ARPC5O15511 151 aa13.31□□□□□ -0.28
CPSF2-202ENST00000553427 MBP02144 154 aa13.31□□□□□ -0.28
CPSF2-202ENST00000553427 UBE2L3P68036 154 aaKnown RBP13.31□□□□□ -0.28
CPSF2-202ENST00000553427 ZNF345Q14585 488 aa13.31□□□□□ -0.28
CPSF2-202ENST00000553427 RPL7L1Q6DKI1 246 aaKnown RBP13.31□□□□□ -0.28
CPSF2-202ENST00000553427 PQLC2Q6ZP29 291 aa13.31□□□□□ -0.28
CPSF2-202ENST00000553427 LYPD1Q8N2G4 141 aa13.31□□□□□ -0.28
CPSF2-202ENST00000553427 C11orf45Q8TAV5 145 aa13.31□□□□□ -0.28
CPSF2-202ENST00000553427 A0A1W2PPV4 95 aa13.3□□□□□ -0.28
CPSF2-202ENST00000553427 TMEM189A5PLL7 270 aa13.3□□□□□ -0.28
CPSF2-202ENST00000553427 CXorf65A6NEN9 183 aa13.3□□□□□ -0.28
CPSF2-202ENST00000553427 NUPR2A6NF83 97 aa13.3□□□□□ -0.28
CPSF2-202ENST00000553427 M0R3E3 92 aa13.3□□□□□ -0.28
CPSF2-202ENST00000553427 DEFB4AO15263 64 aa13.3□□□□□ -0.28
CPSF2-202ENST00000553427 OR10J4P0C629 311 aa13.3□□□□□ -0.28
CPSF2-202ENST00000553427 CDKN1BP46527 198 aa13.3□□□□□ -0.28
CPSF2-202ENST00000553427 OR10G4Q8NGN3 311 aa13.3□□□□□ -0.28
CPSF2-202ENST00000553427 OR10G9Q8NGN4 311 aa13.3□□□□□ -0.28
CPSF2-202ENST00000553427 OR10G7Q8NGN6 311 aa13.3□□□□□ -0.28
CPSF2-202ENST00000553427 PHYHIPLQ96FC7 376 aa13.3□□□□□ -0.28
CPSF2-202ENST00000553427 PPP1R14DQ9NXH3 145 aa13.3□□□□□ -0.28
CPSF2-202ENST00000553427 DNAH1Q9P2D7 4330 aa13.3□□□□□ -0.28
CPSF2-202ENST00000553427 ALMS1Q8TCU4 4167 aa13.29□□□□□ -0.28
CPSF2-202ENST00000553427 HMSDA8MTL9 139 aa13.29□□□□□ -0.28
CPSF2-202ENST00000553427 SMLR1H3BR10 107 aa13.29□□□□□ -0.28
CPSF2-202ENST00000553427 JTBO76095 146 aa13.29□□□□□ -0.28
CPSF2-202ENST00000553427 TSPOP30536 169 aa13.29□□□□□ -0.28
CPSF2-202ENST00000553427 TMEM256Q8N2U0 113 aa13.29□□□□□ -0.28
CPSF2-202ENST00000553427 EXOC3-AS1Q8N2X6 119 aa13.29□□□□□ -0.28
CPSF2-202ENST00000553427 RPP25LQ8N5L8 163 aaKnown RBP13.29□□□□□ -0.28
CPSF2-202ENST00000553427 SH3BGRL3Q9H299 93 aa13.29□□□□□ -0.28
CPSF2-202ENST00000553427 HBE1P02100 147 aa13.28□□□□□ -0.28
CPSF2-202ENST00000553427 CDC34P49427 236 aaPredicted RBP13.28□□□□□ -0.28
CPSF2-202ENST00000553427 PMS2P11Q13670 270 aa13.28□□□□□ -0.28
CPSF2-202ENST00000553427 ICAM4Q14773 271 aa13.28□□□□□ -0.28
CPSF2-202ENST00000553427 FAM122CQ6P4D5 195 aa13.28□□□□□ -0.28
CPSF2-202ENST00000553427 BAP18Q8IXM2 172 aa13.28□□□□□ -0.28
CPSF2-202ENST00000553427 C20orf144Q9BQM9 153 aa13.28□□□□□ -0.28
CPSF2-202ENST00000553427 IGHV3OR16-12A0A075B7B8 117 aa13.27□□□□□ -0.29
CPSF2-202ENST00000553427 STAG3L2P0CL84 134 aa13.27□□□□□ -0.29
CPSF2-202ENST00000553427 STAG3L3P0CL85 134 aa13.27□□□□□ -0.29
CPSF2-202ENST00000553427 NANOS2P60321 138 aaKnown RBP13.27□□□□□ -0.29
CPSF2-202ENST00000553427 CEMP1Q6PRD7 247 aaPredicted RBP13.27□□□□□ -0.29
CPSF2-202ENST00000553427 Q6ZNX1 250 aa13.27□□□□□ -0.29
CPSF2-202ENST00000553427 KCNRGQ8N5I3 272 aa13.27□□□□□ -0.29
CPSF2-202ENST00000553427 LINC00477Q96M19 166 aa13.27□□□□□ -0.29
CPSF2-202ENST00000553427 TMEM208Q9BTX3 173 aa13.27□□□□□ -0.29
CPSF2-202ENST00000553427 CYTL1Q9NRR1 136 aa13.27□□□□□ -0.29
CPSF2-202ENST00000553427 RYR3Q15413 4870 aa13.27□□□□□ -0.29
CPSF2-202ENST00000553427 TRAV12-2A0A075B6T6 113 aa13.26□□□□□ -0.29
CPSF2-202ENST00000553427 CT45A10P0DMU9 189 aa13.26□□□□□ -0.29
CPSF2-202ENST00000553427 PRB4P10163 310 aaPredicted RBP13.26□□□□□ -0.29
CPSF2-202ENST00000553427 LEPP41159 167 aa13.26□□□□□ -0.29
CPSF2-202ENST00000553427 RRN3P1Q2M238 152 aa13.26□□□□□ -0.29
CPSF2-202ENST00000553427 C9orf47Q6ZRZ4 202 aa13.26□□□□□ -0.29
CPSF2-202ENST00000553427 OR11H4Q8NGC9 324 aa13.26□□□□□ -0.29
CPSF2-202ENST00000553427 PHLDA1Q8WV24 401 aaPredicted RBP13.26□□□□□ -0.29
CPSF2-202ENST00000553427 Q9H3A6 140 aa13.26□□□□□ -0.29
CPSF2-202ENST00000553427 RYR2Q92736 4967 aa13.25□□□□□ -0.29
CPSF2-202ENST00000553427 TEX48A0A1B0GUV7 120 aa13.25□□□□□ -0.29
CPSF2-202ENST00000553427 RANP62826 216 aaKnown RBP13.25□□□□□ -0.29
CPSF2-202ENST00000553427 ARL6IP6Q8N6S5 226 aa13.25□□□□□ -0.29
CPSF2-202ENST00000553427 SUN5Q8TC36 379 aa13.25□□□□□ -0.29
CPSF2-202ENST00000553427 RAB24Q969Q5 203 aa13.25□□□□□ -0.29
CPSF2-202ENST00000553427 FAM19A4Q96LR4 140 aa13.25□□□□□ -0.29
CPSF2-202ENST00000553427 A0A0D9SG52 128 aa13.24□□□□□ -0.29
CPSF2-202ENST00000553427 LOC102723971A0A1B0GUV8 181 aa13.24□□□□□ -0.29
CPSF2-202ENST00000553427 RBAKDNA6NC62 111 aa13.24□□□□□ -0.29
CPSF2-202ENST00000553427 SLC25A5P05141 298 aaKnown RBP13.24□□□□□ -0.29
CPSF2-202ENST00000553427 ARL14EPLP0DKL9 152 aa13.24□□□□□ -0.29
CPSF2-202ENST00000553427 CSN1S1P47710 185 aa13.24□□□□□ -0.29
CPSF2-202ENST00000553427 GFI1BQ5VTD9 330 aa13.24□□□□□ -0.29
CPSF2-202ENST00000553427 ARPC5LQ9BPX5 153 aa13.24□□□□□ -0.29
CPSF2-202ENST00000553427 ACTR3CQ9C0K3 210 aaPredicted RBP13.24□□□□□ -0.29
CPSF2-202ENST00000553427 AGPAT4-IT1Q9H0P7 198 aa13.24□□□□□ -0.29
CPSF2-202ENST00000553427 OTORQ9NRC9 128 aa13.24□□□□□ -0.29
CPSF2-202ENST00000553427 CELA1Q9UNI1 258 aa13.24□□□□□ -0.29
CPSF2-202ENST00000553427 KLK5Q9Y337 293 aaPredicted RBP13.24□□□□□ -0.29
CPSF2-202ENST00000553427 TRBV7-9A0A0J9YWB2 115 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms