RNA–Protein interactions for RNA: ENST00000553338.1

IFT43-204, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 684 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-204ENST00000553338 PARD6GQ9BYG4 376 aaPredicted RBP13.79□□□□□ -0.2
IFT43-204ENST00000553338 IGLV2-18A0A075B6J9 118 aa13.78□□□□□ -0.2
IFT43-204ENST00000553338 GUK1Q16774 197 aa13.78□□□□□ -0.2
IFT43-204ENST00000553338 ATP6V1FQ16864 119 aa13.78□□□□□ -0.2
IFT43-204ENST00000553338 C16orf74Q96GX8 76 aa13.78□□□□□ -0.2
IFT43-204ENST00000553338 C15orf53Q8NAA6 179 aa13.77□□□□□ -0.21
IFT43-204ENST00000553338 F5H768 121 aa13.76□□□□□ -0.21
IFT43-204ENST00000553338 H7BYZ3 331 aa13.76□□□□□ -0.21
IFT43-204ENST00000553338 UPK1BO75841 260 aa13.76□□□□□ -0.21
IFT43-204ENST00000553338 SIX6O95475 246 aa13.76□□□□□ -0.21
IFT43-204ENST00000553338 KIR3DS1Q14943 382 aa13.76□□□□□ -0.21
IFT43-204ENST00000553338 LGALS9BQ3B8N2 356 aa13.76□□□□□ -0.21
IFT43-204ENST00000553338 RNF212Q495C1 297 aa13.76□□□□□ -0.21
IFT43-204ENST00000553338 ZNF586Q9NXT0 402 aa13.76□□□□□ -0.21
IFT43-204ENST00000553338 TIMM8BQ9Y5J9 83 aaPredicted RBP13.76□□□□□ -0.21
IFT43-204ENST00000553338 J3KRW8 73 aa13.75□□□□□ -0.21
IFT43-204ENST00000553338 GFI1BQ5VTD9 330 aa13.75□□□□□ -0.21
IFT43-204ENST00000553338 TMEM263Q8WUH6 116 aaKnown RBP13.75□□□□□ -0.21
IFT43-204ENST00000553338 CHAC2Q8WUX2 184 aa13.75□□□□□ -0.21
IFT43-204ENST00000553338 C20orf144Q9BQM9 153 aa13.75□□□□□ -0.21
IFT43-204ENST00000553338 CBY3A6NI87 242 aa13.74□□□□□ -0.21
IFT43-204ENST00000553338 ZNF253O75346 499 aa13.74□□□□□ -0.21
IFT43-204ENST00000553338 MPDU1O75352 247 aa13.74□□□□□ -0.21
IFT43-204ENST00000553338 RLN2P04090 185 aa13.74□□□□□ -0.21
IFT43-204ENST00000553338 ATP5G1P05496 136 aa13.74□□□□□ -0.21
IFT43-204ENST00000553338 ATP5G3P48201 142 aa13.74□□□□□ -0.21
IFT43-204ENST00000553338 LRRC37A5PQ49AS3 106 aa13.74□□□□□ -0.21
IFT43-204ENST00000553338 ZNF493Q6ZR52 646 aa13.74□□□□□ -0.21
IFT43-204ENST00000553338 RNASE8Q8TDE3 154 aaKnown RBP13.74□□□□□ -0.21
IFT43-204ENST00000553338 NPCDR1Q9BY65 106 aa13.74□□□□□ -0.21
IFT43-204ENST00000553338 NOP10Q9NPE3 64 aaKnown RBP13.74□□□□□ -0.21
IFT43-204ENST00000553338 HECTD4Q9Y4D8 3996 aa13.73□□□□□ -0.21
IFT43-204ENST00000553338 TRBV19A0A075B6N1 114 aa13.73□□□□□ -0.21
IFT43-204ENST00000553338 NPIPB6E9PJ23 425 aa13.73□□□□□ -0.21
IFT43-204ENST00000553338 CT45A10P0DMU9 189 aa13.73□□□□□ -0.21
IFT43-204ENST00000553338 LEPP41159 167 aa13.73□□□□□ -0.21
IFT43-204ENST00000553338 NHLH2Q02577 135 aa13.73□□□□□ -0.21
IFT43-204ENST00000553338 CCDC28AQ8IWP9 274 aa13.73□□□□□ -0.21
IFT43-204ENST00000553338 OR5C1Q8NGR4 320 aa13.73□□□□□ -0.21
IFT43-204ENST00000553338 THAP6Q8TBB0 222 aa13.73□□□□□ -0.21
IFT43-204ENST00000553338 ATG101Q9BSB4 218 aa13.73□□□□□ -0.21
IFT43-204ENST00000553338 SLC25A31Q9H0C2 315 aa13.73□□□□□ -0.21
IFT43-204ENST00000553338 TMEM14CQ9P0S9 112 aa13.73□□□□□ -0.21
IFT43-204ENST00000553338 TIMM9Q9Y5J7 89 aa13.73□□□□□ -0.21
IFT43-204ENST00000553338 PRSS29PA6NIE9 313 aa13.72□□□□□ -0.21
IFT43-204ENST00000553338 E5RGE8 158 aa13.72□□□□□ -0.21
IFT43-204ENST00000553338 RTL8CO15255 209 aa13.72□□□□□ -0.21
IFT43-204ENST00000553338 PYYP10082 97 aa13.72□□□□□ -0.21
IFT43-204ENST00000553338 GCSAMLQ5JQS6 135 aa13.72□□□□□ -0.21
IFT43-204ENST00000553338 MRPL53Q96EL3 112 aaKnown RBP13.72□□□□□ -0.21
IFT43-204ENST00000553338 ODF3Q96PU9 254 aa13.72□□□□□ -0.21
IFT43-204ENST00000553338 NMES1Q9C002 83 aa13.72□□□□□ -0.21
IFT43-204ENST00000553338 OR5AC2Q9NZP5 309 aa13.72□□□□□ -0.21
IFT43-204ENST00000553338 TRAV12-3A0A0B4J271 114 aa13.71□□□□□ -0.21
IFT43-204ENST00000553338 INMT-MINDY4F8WBC2 141 aa13.71□□□□□ -0.21
IFT43-204ENST00000553338 M0R3E3 92 aa13.71□□□□□ -0.21
IFT43-204ENST00000553338 PRAF2O60831 178 aa13.71□□□□□ -0.21
IFT43-204ENST00000553338 NUDT3O95989 172 aa13.71□□□□□ -0.21
IFT43-204ENST00000553338 HIST1H1EP10412 219 aaKnown RBP13.71□□□□□ -0.21
IFT43-204ENST00000553338 IFITM3Q01628 133 aa13.71□□□□□ -0.21
IFT43-204ENST00000553338 CLINT1Q14677 625 aa13.71□□□□□ -0.21
IFT43-204ENST00000553338 BLNKQ8WV28 456 aa13.71□□□□□ -0.21
IFT43-204ENST00000553338 A6NHS1 94 aa13.7□□□□□ -0.22
IFT43-204ENST00000553338 Q6ZR54 194 aa13.7□□□□□ -0.22
IFT43-204ENST00000553338 PTTG2Q9NZH5 202 aa13.7□□□□□ -0.22
IFT43-204ENST00000553338 PRELID1Q9Y255 219 aa13.7□□□□□ -0.22
IFT43-204ENST00000553338 SNURFLB1AK76 121 aa13.69□□□□□ -0.22
IFT43-204ENST00000553338 NDUFB4O95168 129 aa13.69□□□□□ -0.22
IFT43-204ENST00000553338 FAM3BP58499 235 aaPredicted RBP13.69□□□□□ -0.22
IFT43-204ENST00000553338 CYCSP99999 105 aaKnown RBP13.69□□□□□ -0.22
IFT43-204ENST00000553338 ERCC8Q13216 396 aa13.69□□□□□ -0.22
IFT43-204ENST00000553338 PDE6HQ13956 83 aa13.69□□□□□ -0.22
IFT43-204ENST00000553338 SLC25A2Q9BXI2 301 aa13.69□□□□□ -0.22
IFT43-204ENST00000553338 AAMDCQ9H7C9 122 aa13.69□□□□□ -0.22
IFT43-204ENST00000553338 A0A1B0GVY2 172 aa13.68□□□□□ -0.22
IFT43-204ENST00000553338 H0YIZ8 118 aa13.68□□□□□ -0.22
IFT43-204ENST00000553338 MIR17HGQ75NE6 70 aa13.68□□□□□ -0.22
IFT43-204ENST00000553338 EXOC3-AS1Q8N2X6 119 aa13.68□□□□□ -0.22
IFT43-204ENST00000553338 KCNIP2Q9NS61 270 aa13.68□□□□□ -0.22
IFT43-204ENST00000553338 SLC25A5P05141 298 aaKnown RBP13.67□□□□□ -0.22
IFT43-204ENST00000553338 SOHLH1Q5JUK2 328 aa13.67□□□□□ -0.22
IFT43-204ENST00000553338 PYGO2Q9BRQ0 406 aa13.67□□□□□ -0.22
IFT43-204ENST00000553338 NACAE9PAV3 2078 aa13.67□□□□□ -0.22
IFT43-204ENST00000553338 GAGE12BA1L429 117 aa13.66□□□□□ -0.22
IFT43-204ENST00000553338 SSNA1O43805 119 aa13.66□□□□□ -0.22
IFT43-204ENST00000553338 GAGE7O76087 117 aa13.66□□□□□ -0.22
IFT43-204ENST00000553338 GAGE12FP0CL80 117 aa13.66□□□□□ -0.22
IFT43-204ENST00000553338 GAGE12GP0CL81 117 aa13.66□□□□□ -0.22
IFT43-204ENST00000553338 GAGE12IP0CL82 117 aa13.66□□□□□ -0.22
IFT43-204ENST00000553338 H2BFSP57053 126 aa13.66□□□□□ -0.22
IFT43-204ENST00000553338 OR5I1Q13606 314 aa13.66□□□□□ -0.22
IFT43-204ENST00000553338 ICAM4Q14773 271 aa13.66□□□□□ -0.22
IFT43-204ENST00000553338 RNF141Q8WVD5 230 aa13.66□□□□□ -0.22
IFT43-204ENST00000553338 FAM167A-AS1Q96KT0 104 aa13.66□□□□□ -0.22
IFT43-204ENST00000553338 LINC00477Q96M19 166 aa13.66□□□□□ -0.22
IFT43-204ENST00000553338 MARVELD1Q9BSK0 173 aa13.66□□□□□ -0.22
IFT43-204ENST00000553338 WDR61Q9GZS3 305 aaKnown RBP13.66□□□□□ -0.22
IFT43-204ENST00000553338 DNAH2Q9P225 4427 aa13.66□□□□□ -0.22
IFT43-204ENST00000553338 C7orf71A4D174 169 aa13.65□□□□□ -0.22
IFT43-204ENST00000553338 C17orf112F2Z3M2 114 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms