RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TEPPQ6URK8 271 aa6.16□□□□□ -1.42
SYNE2-209ENST00000553308 NFE4Q86UQ8 179 aa6.16□□□□□ -1.42
SYNE2-209ENST00000553308 ZNF431Q8TF32 576 aaPredicted RBP6.16□□□□□ -1.42
SYNE2-209ENST00000553308 PSENENQ9NZ42 101 aa6.16□□□□□ -1.42
SYNE2-209ENST00000553308 FAT1Q14517 4588 aa6.15□□□□□ -1.42
SYNE2-209ENST00000553308 MYCBP2O75592 4640 aa6.15□□□□□ -1.42
SYNE2-209ENST00000553308 NPIPB6E9PJ23 425 aa6.15□□□□□ -1.42
SYNE2-209ENST00000553308 K7EPK0 472 aa6.15□□□□□ -1.42
SYNE2-209ENST00000553308 SSSCA1O60232 199 aa6.15□□□□□ -1.42
SYNE2-209ENST00000553308 ZNF324O75467 553 aaPredicted RBP6.15□□□□□ -1.42
SYNE2-209ENST00000553308 SFT2D2O95562 160 aa6.15□□□□□ -1.42
SYNE2-209ENST00000553308 IGHV3-53P01767 116 aa6.15□□□□□ -1.42
SYNE2-209ENST00000553308 LINC00305Q7Z4B0 112 aa6.15□□□□□ -1.42
SYNE2-209ENST00000553308 S100A7AQ86SG5 101 aa6.15□□□□□ -1.42
SYNE2-209ENST00000553308 BPIFA4PQ86YQ2 179 aa6.15□□□□□ -1.42
SYNE2-209ENST00000553308 ZNF680Q8NEM1 530 aa6.15□□□□□ -1.42
SYNE2-209ENST00000553308 ODF3Q96PU9 254 aa6.15□□□□□ -1.42
SYNE2-209ENST00000553308 LINC00467Q9BRT7 94 aa6.15□□□□□ -1.42
SYNE2-209ENST00000553308 RABL2AQ9UBK7 228 aaPredicted RBP6.15□□□□□ -1.42
SYNE2-209ENST00000553308 RSL24D1Q9UHA3 163 aaKnown RBP6.15□□□□□ -1.42
SYNE2-209ENST00000553308 KLF12Q9Y4X4 402 aa6.15□□□□□ -1.42
SYNE2-209ENST00000553308 C7orf71A4D174 169 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 H3BQ15 152 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 SPINK4O60575 86 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 METTL15P1P0C7V9 234 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 IGLC2P0DOY2 106 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 TCL1AP56279 114 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 ID3Q02535 119 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 BTN1A1Q13410 526 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 OPCMLQ14982 345 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 LYPD5Q6UWN5 251 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 WFDC10BQ8IUB3 73 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 TRIM63Q969Q1 353 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 SAT2Q96F10 170 aaPredicted RBP6.14□□□□□ -1.43
SYNE2-209ENST00000553308 ST6GAL2Q96JF0 529 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 MRPL16Q9NX20 251 aaKnown RBP6.14□□□□□ -1.43
SYNE2-209ENST00000553308 MSRB1Q9NZV6 116 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 CCDC59Q9P031 241 aaKnown RBP6.14□□□□□ -1.43
SYNE2-209ENST00000553308 RNF24Q9Y225 148 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 PXMP4Q9Y6I8 212 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 LY96Q9Y6Y9 160 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 VPS13BQ7Z7G8 4022 aa6.14□□□□□ -1.43
SYNE2-209ENST00000553308 GOSR2O14653 212 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 AGPAT2O15120 278 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 COX7A2P2O60397 106 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 SLC25A5P05141 298 aaKnown RBP6.13□□□□□ -1.43
SYNE2-209ENST00000553308 FAUP35544 74 aaKnown RBP6.13□□□□□ -1.43
SYNE2-209ENST00000553308 CRYBA4P53673 196 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 CD300CQ08708 224 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 ERCC8Q13216 396 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 PXDC1Q5TGL8 231 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 TMEM14EPQ6UXP3 125 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 ZNF546Q86UE3 836 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 EIF4E3Q8N5X7 224 aaKnown RBP6.13□□□□□ -1.43
SYNE2-209ENST00000553308 MCFD2Q8NI22 146 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 DYNC2LI1Q8TCX1 351 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 TMEM37Q8WXS4 190 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 C8orf49Q96NF6 230 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 SOSTQ9BQB4 213 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 TMEM70Q9BUB7 260 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 NPVFQ9HCQ7 196 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 MGAT4CQ9UBM8 478 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 PRO0255Q9UI72 69 aa6.13□□□□□ -1.43
SYNE2-209ENST00000553308 TRAV9-2A0A087WT02 112 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 IGLV5-52A0A0A0MRZ9 124 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 TRAV5A0A0B4J249 113 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 KLLNB2CW77 178 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 FNDC10F2Z333 226 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 M0R3E3 92 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 PRAF2O60831 178 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 TNFSF8P32971 234 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 ARL16Q0P5N6 197 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 FHL2Q14192 279 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 MRPL23Q16540 153 aaKnown RBP6.12□□□□□ -1.43
SYNE2-209ENST00000553308 ANXA2RQ3ZCQ2 193 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 C10orf113Q5VZT2 155 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 NEGR1Q7Z3B1 354 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 OR10P1Q8NGE3 313 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 SMIM8Q96KF7 97 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 MGST2Q99735 147 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 VGLL1Q99990 258 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 TP53TG3Q9ULZ0 132 aa6.12□□□□□ -1.43
SYNE2-209ENST00000553308 SRRM2Q9UQ35 2752 aaKnown RBP6.11□□□□□ -1.43
SYNE2-209ENST00000553308 FABP12A6NFH5 140 aa6.11□□□□□ -1.43
SYNE2-209ENST00000553308 OR4E1P0C645 316 aa6.11□□□□□ -1.43
SYNE2-209ENST00000553308 RNASE4P34096 147 aaKnown RBP6.11□□□□□ -1.43
SYNE2-209ENST00000553308 IBA57Q5T440 356 aaKnown RBP6.11□□□□□ -1.43
SYNE2-209ENST00000553308 PRR9Q5T870 116 aa6.11□□□□□ -1.43
SYNE2-209ENST00000553308 Q6ZQT7 251 aa6.11□□□□□ -1.43
SYNE2-209ENST00000553308 TOMM5Q8N4H5 51 aa6.11□□□□□ -1.43
SYNE2-209ENST00000553308 FAM19A4Q96LR4 140 aa6.11□□□□□ -1.43
SYNE2-209ENST00000553308 SLC25A21Q9BQT8 299 aaPredicted RBP6.11□□□□□ -1.43
SYNE2-209ENST00000553308 FAM30AQ9NZY2 134 aa6.11□□□□□ -1.43
SYNE2-209ENST00000553308 HHLA3Q9XRX5 114 aa6.11□□□□□ -1.43
SYNE2-209ENST00000553308 C9orf170A2RU37 121 aa6.1□□□□□ -1.43
SYNE2-209ENST00000553308 LRCOL1A6NCL2 159 aa6.1□□□□□ -1.43
SYNE2-209ENST00000553308 E5RGE8 158 aa6.1□□□□□ -1.43
SYNE2-209ENST00000553308 K7EQD1 137 aa6.1□□□□□ -1.43
SYNE2-209ENST00000553308 MPDU1O75352 247 aa6.1□□□□□ -1.43
SYNE2-209ENST00000553308 SCGB1D2O95969 90 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms