RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 NPCDR1Q9BY65 106 aa9.22□□□□□ -0.93
ACTN1-207ENST00000553290 BATF3Q9NR55 127 aa9.22□□□□□ -0.93
ACTN1-207ENST00000553290 PLA2G2EQ9NZK7 142 aa9.22□□□□□ -0.93
ACTN1-207ENST00000553290 ZNF253O75346 499 aa9.21□□□□□ -0.94
ACTN1-207ENST00000553290 TAS2R60P59551 318 aa9.21□□□□□ -0.94
ACTN1-207ENST00000553290 LRRC37A5PQ49AS3 106 aa9.21□□□□□ -0.94
ACTN1-207ENST00000553290 OR5C1Q8NGR4 320 aa9.21□□□□□ -0.94
ACTN1-207ENST00000553290 C20orf144Q9BQM9 153 aa9.21□□□□□ -0.94
ACTN1-207ENST00000553290 OR5AC2Q9NZP5 309 aa9.21□□□□□ -0.94
ACTN1-207ENST00000553290 TMEM14CQ9P0S9 112 aa9.21□□□□□ -0.94
ACTN1-207ENST00000553290 PRM2P04554 102 aa9.2□□□□□ -0.94
ACTN1-207ENST00000553290 PRB4P10163 310 aaPredicted RBP9.2□□□□□ -0.94
ACTN1-207ENST00000553290 HTN3P15516 51 aa9.2□□□□□ -0.94
ACTN1-207ENST00000553290 POM121L12Q8N7R1 296 aa9.2□□□□□ -0.94
ACTN1-207ENST00000553290 ZNF586Q9NXT0 402 aa9.2□□□□□ -0.94
ACTN1-207ENST00000553290 DNAH6Q9C0G6 4158 aa9.2□□□□□ -0.94
ACTN1-207ENST00000553290 FRAS1Q86XX4 4008 aa9.19□□□□□ -0.94
ACTN1-207ENST00000553290 TRBV19A0A075B6N1 114 aa9.19□□□□□ -0.94
ACTN1-207ENST00000553290 PRAC2D3DTV9 90 aa9.19□□□□□ -0.94
ACTN1-207ENST00000553290 H0YIZ8 118 aa9.19□□□□□ -0.94
ACTN1-207ENST00000553290 SSNA1O43805 119 aa9.19□□□□□ -0.94
ACTN1-207ENST00000553290 HIST1H1EP10412 219 aaKnown RBP9.19□□□□□ -0.94
ACTN1-207ENST00000553290 AZU1P20160 251 aa9.19□□□□□ -0.94
ACTN1-207ENST00000553290 H2BFSP57053 126 aa9.19□□□□□ -0.94
ACTN1-207ENST00000553290 PDE6HQ13956 83 aa9.19□□□□□ -0.94
ACTN1-207ENST00000553290 ZNF493Q6ZR52 646 aa9.19□□□□□ -0.94
ACTN1-207ENST00000553290 THAP6Q8TBB0 222 aa9.19□□□□□ -0.94
ACTN1-207ENST00000553290 PPP1R1CQ8WVI7 109 aa9.19□□□□□ -0.94
ACTN1-207ENST00000553290 MRPL53Q96EL3 112 aaKnown RBP9.19□□□□□ -0.94
ACTN1-207ENST00000553290 C16orf74Q96GX8 76 aa9.19□□□□□ -0.94
ACTN1-207ENST00000553290 ODF3Q96PU9 254 aa9.19□□□□□ -0.94
ACTN1-207ENST00000553290 KCNIP2Q9NS61 270 aa9.19□□□□□ -0.94
ACTN1-207ENST00000553290 PRELID1Q9Y255 219 aa9.19□□□□□ -0.94
ACTN1-207ENST00000553290 PLAC8L1A1L4L8 177 aa9.18□□□□□ -0.94
ACTN1-207ENST00000553290 H7BYZ3 331 aa9.18□□□□□ -0.94
ACTN1-207ENST00000553290 PET100P0DJ07 73 aa9.18□□□□□ -0.94
ACTN1-207ENST00000553290 HTN1P15515 57 aa9.18□□□□□ -0.94
ACTN1-207ENST00000553290 CLINT1Q14677 625 aa9.18□□□□□ -0.94
ACTN1-207ENST00000553290 TIMM9Q9Y5J7 89 aa9.18□□□□□ -0.94
ACTN1-207ENST00000553290 NPIPB6E9PJ23 425 aa9.17□□□□□ -0.94
ACTN1-207ENST00000553290 C17orf112F2Z3M2 114 aa9.17□□□□□ -0.94
ACTN1-207ENST00000553290 LEPP41159 167 aa9.17□□□□□ -0.94
ACTN1-207ENST00000553290 GCSAMLQ5JQS6 135 aa9.17□□□□□ -0.94
ACTN1-207ENST00000553290 TMEM263Q8WUH6 116 aaKnown RBP9.17□□□□□ -0.94
ACTN1-207ENST00000553290 WDR61Q9GZS3 305 aaKnown RBP9.17□□□□□ -0.94
ACTN1-207ENST00000553290 TIMM8BQ9Y5J9 83 aaPredicted RBP9.17□□□□□ -0.94
ACTN1-207ENST00000553290 NDUFB4O95168 129 aa9.16□□□□□ -0.94
ACTN1-207ENST00000553290 MPC2O95563 127 aa9.16□□□□□ -0.94
ACTN1-207ENST00000553290 CT45A10P0DMU9 189 aa9.16□□□□□ -0.94
ACTN1-207ENST00000553290 DEFB130BP0DP73 79 aa9.16□□□□□ -0.94
ACTN1-207ENST00000553290 DEFB130AP0DP74 79 aa9.16□□□□□ -0.94
ACTN1-207ENST00000553290 PYYP10082 97 aa9.16□□□□□ -0.94
ACTN1-207ENST00000553290 KIR3DS1Q14943 382 aa9.16□□□□□ -0.94
ACTN1-207ENST00000553290 GFI1BQ5VTD9 330 aa9.16□□□□□ -0.94
ACTN1-207ENST00000553290 TMEM88Q6PEY1 159 aa9.16□□□□□ -0.94
ACTN1-207ENST00000553290 CCDC28AQ8IWP9 274 aa9.16□□□□□ -0.94
ACTN1-207ENST00000553290 C15orf53Q8NAA6 179 aa9.16□□□□□ -0.94
ACTN1-207ENST00000553290 RNASE8Q8TDE3 154 aaKnown RBP9.16□□□□□ -0.94
ACTN1-207ENST00000553290 BLNKQ8WV28 456 aa9.16□□□□□ -0.94
ACTN1-207ENST00000553290 ATP5SQ99766 215 aa9.16□□□□□ -0.94
ACTN1-207ENST00000553290 SLC25A2Q9BXI2 301 aa9.16□□□□□ -0.94
ACTN1-207ENST00000553290 MRPL32Q9BYC8 188 aaKnown RBP9.16□□□□□ -0.94
ACTN1-207ENST00000553290 PARD6GQ9BYG4 376 aaPredicted RBP9.16□□□□□ -0.94
ACTN1-207ENST00000553290 AAMDCQ9H7C9 122 aa9.16□□□□□ -0.94
ACTN1-207ENST00000553290 CBY3A6NI87 242 aa9.15□□□□□ -0.94
ACTN1-207ENST00000553290 M0R3E3 92 aa9.15□□□□□ -0.94
ACTN1-207ENST00000553290 FCN2Q15485 313 aa9.15□□□□□ -0.94
ACTN1-207ENST00000553290 RNF212Q495C1 297 aa9.15□□□□□ -0.94
ACTN1-207ENST00000553290 UBE2DNLQ8IWF7 75 aa9.15□□□□□ -0.94
ACTN1-207ENST00000553290 FAM167A-AS1Q96KT0 104 aa9.15□□□□□ -0.94
ACTN1-207ENST00000553290 LINC00477Q96M19 166 aa9.15□□□□□ -0.94
ACTN1-207ENST00000553290 HSPB11Q9Y547 144 aa9.15□□□□□ -0.94
ACTN1-207ENST00000553290 DNAH10Q8IVF4 4471 aa9.14□□□□□ -0.95
ACTN1-207ENST00000553290 IFNA5P01569 189 aa9.14□□□□□ -0.95
ACTN1-207ENST00000553290 ATP5G1P05496 136 aa9.14□□□□□ -0.95
ACTN1-207ENST00000553290 NBEAP1P0C6P0 100 aa9.14□□□□□ -0.95
ACTN1-207ENST00000553290 RPL12P30050 165 aaKnown RBP9.14□□□□□ -0.95
ACTN1-207ENST00000553290 ATP5G3P48201 142 aa9.14□□□□□ -0.95
ACTN1-207ENST00000553290 MIR17HGQ75NE6 70 aa9.14□□□□□ -0.95
ACTN1-207ENST00000553290 PYGO2Q9BRQ0 406 aa9.14□□□□□ -0.95
ACTN1-207ENST00000553290 OR51M1Q9H341 326 aa9.14□□□□□ -0.95
ACTN1-207ENST00000553290 NOP10Q9NPE3 64 aaKnown RBP9.14□□□□□ -0.95
ACTN1-207ENST00000553290 FUT9Q9Y231 359 aa9.14□□□□□ -0.95
ACTN1-207ENST00000553290 TRAV12-3A0A0B4J271 114 aa9.13□□□□□ -0.95
ACTN1-207ENST00000553290 F5H768 121 aa9.13□□□□□ -0.95
ACTN1-207ENST00000553290 J3KRW8 73 aa9.13□□□□□ -0.95
ACTN1-207ENST00000553290 SLC25A5P05141 298 aaKnown RBP9.13□□□□□ -0.95
ACTN1-207ENST00000553290 ICAM4Q14773 271 aa9.13□□□□□ -0.95
ACTN1-207ENST00000553290 C9orf47Q6ZRZ4 202 aa9.13□□□□□ -0.95
ACTN1-207ENST00000553290 EXOC3-AS1Q8N2X6 119 aa9.13□□□□□ -0.95
ACTN1-207ENST00000553290 SCGB1C1Q8TD33 95 aa9.13□□□□□ -0.95
ACTN1-207ENST00000553290 PAXXQ9BUH6 204 aa9.13□□□□□ -0.95
ACTN1-207ENST00000553290 MBD2Q9UBB5 411 aa9.13□□□□□ -0.95
ACTN1-207ENST00000553290 C7orf71A4D174 169 aa9.12□□□□□ -0.95
ACTN1-207ENST00000553290 SNURFLB1AK76 121 aa9.12□□□□□ -0.95
ACTN1-207ENST00000553290 ERCC8Q13216 396 aa9.12□□□□□ -0.95
ACTN1-207ENST00000553290 LGALS9BQ3B8N2 356 aa9.12□□□□□ -0.95
ACTN1-207ENST00000553290 LINC00336Q6ZUF6 198 aa9.12□□□□□ -0.95
ACTN1-207ENST00000553290 RNF141Q8WVD5 230 aa9.12□□□□□ -0.95
ACTN1-207ENST00000553290 FXYD5Q96DB9 178 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms