RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 SMIM27A0A1W2PRY6 76 aa7.49□□□□□ -1.21
TMEM116-216ENST00000552800 K7EQM0 130 aa7.49□□□□□ -1.21
TMEM116-216ENST00000552800 LGALS1P09382 135 aaKnown RBP7.49□□□□□ -1.21
TMEM116-216ENST00000552800 S100PP25815 95 aa7.49□□□□□ -1.21
TMEM116-216ENST00000552800 SRSF2Q01130 221 aaKnown RBP7.49□□□□□ -1.21
TMEM116-216ENST00000552800 PSG3Q16557 428 aa7.49□□□□□ -1.21
TMEM116-216ENST00000552800 COX19Q49B96 90 aa7.49□□□□□ -1.21
TMEM116-216ENST00000552800 FAM106AQ4KMX7 169 aa7.49□□□□□ -1.21
TMEM116-216ENST00000552800 KCNIP4Q6PIL6 250 aa7.49□□□□□ -1.21
TMEM116-216ENST00000552800 RASL11AQ6T310 242 aa7.49□□□□□ -1.21
TMEM116-216ENST00000552800 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.49□□□□□ -1.21
TMEM116-216ENST00000552800 CMTM2Q8TAZ6 248 aa7.49□□□□□ -1.21
TMEM116-216ENST00000552800 FAM210BQ96KR6 192 aa7.49□□□□□ -1.21
TMEM116-216ENST00000552800 LINC00479Q96M42 142 aa7.49□□□□□ -1.21
TMEM116-216ENST00000552800 OR5B12Q96R08 314 aa7.49□□□□□ -1.21
TMEM116-216ENST00000552800 GFRA4Q9GZZ7 299 aa7.49□□□□□ -1.21
TMEM116-216ENST00000552800 LENEPQ9Y5L5 61 aa7.49□□□□□ -1.21
TMEM116-216ENST00000552800 FLNAP21333 2647 aaKnown RBP7.49□□□□□ -1.21
TMEM116-216ENST00000552800 IGHV7-4-1A0A0J9YVY3 117 aa7.48□□□□□ -1.21
TMEM116-216ENST00000552800 PGPEP1LA6NFU8 196 aa7.48□□□□□ -1.21
TMEM116-216ENST00000552800 PPP5D1E7EU14 171 aa7.48□□□□□ -1.21
TMEM116-216ENST00000552800 SLC17A3O00476 420 aa7.48□□□□□ -1.21
TMEM116-216ENST00000552800 SOCS3O14543 225 aa7.48□□□□□ -1.21
TMEM116-216ENST00000552800 TRBV12-3P01733 135 aa7.48□□□□□ -1.21
TMEM116-216ENST00000552800 FAM3BP58499 235 aaPredicted RBP7.48□□□□□ -1.21
TMEM116-216ENST00000552800 HILS1P60008 231 aa7.48□□□□□ -1.21
TMEM116-216ENST00000552800 SAPCD1Q5SSQ6 148 aa7.48□□□□□ -1.21
TMEM116-216ENST00000552800 UNQ9165/PRO28630Q6UXU0 137 aa7.48□□□□□ -1.21
TMEM116-216ENST00000552800 Q6ZSV7 163 aa7.48□□□□□ -1.21
TMEM116-216ENST00000552800 EXOC3-AS1Q8N2X6 119 aa7.48□□□□□ -1.21
TMEM116-216ENST00000552800 DAZ1Q9NQZ3 744 aaKnown RBP7.48□□□□□ -1.21
TMEM116-216ENST00000552800 SMPXQ9UHP9 88 aa7.48□□□□□ -1.21
TMEM116-216ENST00000552800 TRAV8-2A0A0B4J237 113 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 C1orf196B1AJZ1 125 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 CHEK1O14757 476 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 SMAD7O15105 426 aaKnown RBP7.47□□□□□ -1.21
TMEM116-216ENST00000552800 NDUFA7O95182 113 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 APOHP02749 345 aaPredicted RBP7.47□□□□□ -1.21
TMEM116-216ENST00000552800 CSN1S1P47710 185 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 ERVFC1-1P60608 527 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 UBE2G1P62253 170 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 KLF5Q13887 457 aaPredicted RBP7.47□□□□□ -1.21
TMEM116-216ENST00000552800 IBA57Q5T440 356 aaKnown RBP7.47□□□□□ -1.21
TMEM116-216ENST00000552800 LCN12Q6JVE5 192 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 C9orf47Q6ZRZ4 202 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 NUDT10Q8NFP7 164 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 OR4B1Q8NGF8 309 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 NUDT11Q96G61 164 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 GRAMD2BQ96HH9 432 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 SAV1Q9H4B6 383 aaPredicted RBP7.47□□□□□ -1.21
TMEM116-216ENST00000552800 ESM1Q9NQ30 184 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 PSG8Q9UQ74 426 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 UFC1Q9Y3C8 167 aa7.47□□□□□ -1.21
TMEM116-216ENST00000552800 TGIF2-C20orf24A0A0A6YYL0 155 aa7.46□□□□□ -1.22
TMEM116-216ENST00000552800 C5orf52A6NGY3 159 aa7.46□□□□□ -1.22
TMEM116-216ENST00000552800 DNAJC9-AS1A6NH13 148 aa7.46□□□□□ -1.22
TMEM116-216ENST00000552800 BMI1P35226 326 aa7.46□□□□□ -1.22
TMEM116-216ENST00000552800 RAB5BP61020 215 aa7.46□□□□□ -1.22
TMEM116-216ENST00000552800 GNG5P63218 68 aa7.46□□□□□ -1.22
TMEM116-216ENST00000552800 RPL19P84098 196 aaKnown RBP7.46□□□□□ -1.22
TMEM116-216ENST00000552800 COA6Q5JTJ3 125 aaKnown RBP7.46□□□□□ -1.22
TMEM116-216ENST00000552800 Q86TA4 180 aa7.46□□□□□ -1.22
TMEM116-216ENST00000552800 KLHDC1Q8N7A1 406 aa7.46□□□□□ -1.22
TMEM116-216ENST00000552800 YAE1D1Q9NRH1 226 aa7.46□□□□□ -1.22
TMEM116-216ENST00000552800 TLN2Q9Y4G6 2542 aa7.46□□□□□ -1.22
TMEM116-216ENST00000552800 MYO9AB2RTY4 2548 aa7.45□□□□□ -1.22
TMEM116-216ENST00000552800 ACANP16112 2415 aa7.45□□□□□ -1.22
TMEM116-216ENST00000552800 TRAV34A0A0B4J273 112 aa7.45□□□□□ -1.22
TMEM116-216ENST00000552800 OR5I1Q13606 314 aa7.45□□□□□ -1.22
TMEM116-216ENST00000552800 TMEM95Q3KNT9 176 aa7.45□□□□□ -1.22
TMEM116-216ENST00000552800 TCTEX1D4Q5JR98 221 aa7.45□□□□□ -1.22
TMEM116-216ENST00000552800 GOLT1AQ6ZVE7 132 aa7.45□□□□□ -1.22
TMEM116-216ENST00000552800 APRG1Q8IVJ8 170 aa7.45□□□□□ -1.22
TMEM116-216ENST00000552800 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.45□□□□□ -1.22
TMEM116-216ENST00000552800 TSKUQ8WUA8 353 aa7.45□□□□□ -1.22
TMEM116-216ENST00000552800 C4orf3Q8WVX3 66 aa7.45□□□□□ -1.22
TMEM116-216ENST00000552800 PRR25Q96S07 402 aa7.45□□□□□ -1.22
TMEM116-216ENST00000552800 JMJD8Q96S16 334 aa7.45□□□□□ -1.22
TMEM116-216ENST00000552800 GNB1LQ9BYB4 327 aa7.45□□□□□ -1.22
TMEM116-216ENST00000552800 GNB4Q9HAV0 340 aa7.45□□□□□ -1.22
TMEM116-216ENST00000552800 SIGLEC8Q9NYZ4 499 aa7.45□□□□□ -1.22
TMEM116-216ENST00000552800 TRAV2A0A0B4J234 112 aa7.44□□□□□ -1.22
TMEM116-216ENST00000552800 TMEM213A2RRL7 107 aa7.44□□□□□ -1.22
TMEM116-216ENST00000552800 M0R3E3 92 aa7.44□□□□□ -1.22
TMEM116-216ENST00000552800 CRIP1P50238 77 aa7.44□□□□□ -1.22
TMEM116-216ENST00000552800 RPEL1Q2QD12 228 aa7.44□□□□□ -1.22
TMEM116-216ENST00000552800 C10orf99Q6UWK7 81 aa7.44□□□□□ -1.22
TMEM116-216ENST00000552800 LINC00322Q6ZN03 302 aaPredicted RBP7.44□□□□□ -1.22
TMEM116-216ENST00000552800 ATP5L2Q7Z4Y8 100 aa7.44□□□□□ -1.22
TMEM116-216ENST00000552800 ZNF575Q86XF7 245 aa7.44□□□□□ -1.22
TMEM116-216ENST00000552800 GATD1Q8NB37 220 aa7.44□□□□□ -1.22
TMEM116-216ENST00000552800 ZNF418Q8TF45 676 aaPredicted RBP7.44□□□□□ -1.22
TMEM116-216ENST00000552800 FAM19A4Q96LR4 140 aa7.44□□□□□ -1.22
TMEM116-216ENST00000552800 LINC00477Q96M19 166 aa7.44□□□□□ -1.22
TMEM116-216ENST00000552800 RHPN1-AS1Q9BWJ2 59 aa7.44□□□□□ -1.22
TMEM116-216ENST00000552800 AURKAIP1Q9NWT8 199 aaPredicted RBP7.44□□□□□ -1.22
TMEM116-216ENST00000552800 URGCP-MRPS24S4R325 110 aa7.44□□□□□ -1.22
TMEM116-216ENST00000552800 IGHV3-35A0A0C4DH35 117 aa7.43□□□□□ -1.22
TMEM116-216ENST00000552800 IZUMO1RA6ND01 250 aa7.43□□□□□ -1.22
TMEM116-216ENST00000552800 A8MWL6 223 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms