RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 TRAV12-3A0A0B4J271 114 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 GATCO43716 136 aaKnown RBP6.28□□□□□ -1.4
CHPT1-208ENST00000552215 PRR20EP86478 221 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 PRR20CP86479 221 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 PRR20DP86480 221 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 PRR20BP86481 221 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 PRR20AP86496 221 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 CD300EQ496F6 205 aaPredicted RBP6.28□□□□□ -1.4
CHPT1-208ENST00000552215 LCN12Q6JVE5 192 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 MRPL32Q9BYC8 188 aaKnown RBP6.28□□□□□ -1.4
CHPT1-208ENST00000552215 C11orf1Q9H5F2 150 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 SRD5A3Q9H8P0 318 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 P01737 135 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 IGHG4P01861 327 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 KRTAP1-1Q07627 177 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 FOXE3Q13461 319 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 RNF212Q495C1 297 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 FAM74A4Q5TZK3 123 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 LINC00477Q96M19 166 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 FAM74A7A6NL05 159 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 GGTLC3B5MD39 225 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 PRAC2D3DTV9 90 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 H0Y8G0 127 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 TMEM61Q8N0U2 210 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 BORCS7Q96B45 105 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 CSN3P07498 182 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 SRP19P09132 144 aaKnown RBP6.27□□□□□ -1.41
CHPT1-208ENST00000552215 IGLL1P15814 213 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 STHQ8IWL8 128 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 PGLYRP4Q96LB8 373 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 VGLL1Q99990 258 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 EPDR1Q9UM22 224 aa6.27□□□□□ -1.41
CHPT1-208ENST00000552215 IGF1P05019 195 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 KIAA1644Q3SXP7 199 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 OR10G8Q8NGN5 311 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 OCC1Q8TAD7 63 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 M0R381 172 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 CHEK1O14757 476 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 YPEL3P61236 119 aaPredicted RBP6.26□□□□□ -1.41
CHPT1-208ENST00000552215 RAX2Q96IS3 184 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 KLK9Q9UKQ9 250 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 IGHV7-4-1A0A0J9YVY3 117 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 DEFB4AO15263 64 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 PRM2P04554 102 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 RNASE1P07998 156 aaKnown RBP6.26□□□□□ -1.41
CHPT1-208ENST00000552215 FAM74A3Q4VXF1 159 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 C5orf17Q8NAS9 161 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 OR9G4Q8NGQ1 327 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 SUN5Q8TC36 379 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 PRR25Q96S07 402 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 NRN1Q9NPD7 142 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 SMPXQ9UHP9 88 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 LINC00862A6NCI5 91 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 PDE6DO43924 150 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 CLRN3Q8NCR9 226 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 WIPF2Q8TF74 440 aaPredicted RBP6.26□□□□□ -1.41
CHPT1-208ENST00000552215 C8orf49Q96NF6 230 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 LINC01587Q99440 93 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 NEU1Q99519 415 aa6.26□□□□□ -1.41
CHPT1-208ENST00000552215 SRSF8Q9BRL6 282 aaKnown RBP6.26□□□□□ -1.41
CHPT1-208ENST00000552215 IGHV3-73A0A0B4J1V6 119 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 C2orf70A6NJV1 201 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 NDUFA4O00483 81 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 PSMB8P28062 276 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 FABP9Q0Z7S8 132 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 LINC00482Q8N8I6 264 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 NAT8Q9UHE5 227 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 CFHR3Q02985 330 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 IBA57Q5T440 356 aaKnown RBP6.25□□□□□ -1.41
CHPT1-208ENST00000552215 ZNF114Q8NC26 417 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 MS4A6AQ9H2W1 248 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 PSG8Q9UQ74 426 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 IZUMO1RA6ND01 250 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 PRSS46E5RG02 174 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 MGPP08493 103 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 PSG9Q00887 426 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 THAP8Q8NA92 274 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 CTDSP1Q9GZU7 261 aa6.25□□□□□ -1.41
CHPT1-208ENST00000552215 CD7P09564 240 aa6.24□□□□□ -1.41
CHPT1-208ENST00000552215 MBD3L1Q8WWY6 194 aa6.24□□□□□ -1.41
CHPT1-208ENST00000552215 FXYD5Q96DB9 178 aa6.24□□□□□ -1.41
CHPT1-208ENST00000552215 ZNF331Q9NQX6 463 aaPredicted RBP6.24□□□□□ -1.41
CHPT1-208ENST00000552215 BUB3O43684 328 aa6.24□□□□□ -1.41
CHPT1-208ENST00000552215 DPPA3Q6W0C5 159 aa6.24□□□□□ -1.41
CHPT1-208ENST00000552215 GTSCR1Q86UQ5 136 aa6.24□□□□□ -1.41
CHPT1-208ENST00000552215 TMEM190Q8WZ59 177 aa6.24□□□□□ -1.41
CHPT1-208ENST00000552215 OR11H12B2RN74 326 aa6.24□□□□□ -1.41
CHPT1-208ENST00000552215 IGHV3-53P01767 116 aa6.24□□□□□ -1.41
CHPT1-208ENST00000552215 TCRAP04437 139 aa6.24□□□□□ -1.41
CHPT1-208ENST00000552215 KIR3DS1Q14943 382 aa6.24□□□□□ -1.41
CHPT1-208ENST00000552215 KRTAP24-1Q3LI83 254 aa6.24□□□□□ -1.41
CHPT1-208ENST00000552215 ZNF506Q5JVG8 444 aa6.24□□□□□ -1.41
CHPT1-208ENST00000552215 RNF24Q9Y225 148 aa6.24□□□□□ -1.41
CHPT1-208ENST00000552215 TRBV19A0A075B6N1 114 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 CDX1P47902 265 aaPredicted RBP6.23□□□□□ -1.41
CHPT1-208ENST00000552215 FAM209BQ5JX69 171 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 SPANXN1Q5VSR9 72 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 TMEM189A5PLL7 270 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 OR4C46A6NHA9 309 aa6.23□□□□□ -1.41
CHPT1-208ENST00000552215 CBY3A6NI87 242 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms